RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 TYW1BQ6NUM6 668 aa9.02□□□□□ -0.96
CD55-207ENST00000465534 CADPS2Q86UW7 1296 aa9.02□□□□□ -0.97
CD55-207ENST00000465534 FBXW7Q969H0 707 aa9.02□□□□□ -0.97
CD55-207ENST00000465534 PHF14O94880 888 aa9.01□□□□□ -0.97
CD55-207ENST00000465534 DCAF8L2P0C7V8 631 aa9□□□□□ -0.97
CD55-207ENST00000465534 ITGBL1O95965 494 aaPredicted RBP8.99□□□□□ -0.97
CD55-207ENST00000465534 KIAA1468Q9P260 1216 aa8.99□□□□□ -0.97
CD55-207ENST00000465534 SOWAHBA6NEL2 793 aa8.98□□□□□ -0.97
CD55-207ENST00000465534 LAPTM4BQ86VI4 370 aa8.98□□□□□ -0.97
CD55-207ENST00000465534 ZFRQ96KR1 1074 aaKnown RBP8.97□□□□□ -0.97
CD55-207ENST00000465534 SEPT9Q9UHD8 586 aaPredicted RBP8.96□□□□□ -0.97
CD55-207ENST00000465534 C6orf132Q5T0Z8 1188 aa8.96□□□□□ -0.98
CD55-207ENST00000465534 WBP1LQ9NX94 342 aa8.96□□□□□ -0.98
CD55-207ENST00000465534 DPYSL4O14531 572 aa8.95□□□□□ -0.98
CD55-207ENST00000465534 EPAS1Q99814 870 aa8.95□□□□□ -0.98
CD55-207ENST00000465534 RBM33Q96EV2 1170 aaKnown RBP8.94□□□□□ -0.98
CD55-207ENST00000465534 ONECUT3O60422 494 aaPredicted RBP8.93□□□□□ -0.98
CD55-207ENST00000465534 CAMK2BQ13554 666 aa8.93□□□□□ -0.98
CD55-207ENST00000465534 NYAP1Q6ZVC0 841 aa8.93□□□□□ -0.98
CD55-207ENST00000465534 TRIM6-TRIM34B2RNG4 842 aa8.92□□□□□ -0.98
CD55-207ENST00000465534 KCNC4Q03721 635 aa8.9□□□□□ -0.98
CD55-207ENST00000465534 FAM98CQ17RN3 349 aaKnown RBP8.9□□□□□ -0.98
CD55-207ENST00000465534 DDX12PQ92771 950 aa8.9□□□□□ -0.98
CD55-207ENST00000465534 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.89□□□□□ -0.99
CD55-207ENST00000465534 LRCH3Q96II8 777 aa8.88□□□□□ -0.99
CD55-207ENST00000465534 TSR3Q9UJK0 312 aaKnown RBP8.88□□□□□ -0.99
CD55-207ENST00000465534 HPS5Q9UPZ3 1129 aa8.88□□□□□ -0.99
CD55-207ENST00000465534 Q6ZNB5 142 aa8.87□□□□□ -0.99
CD55-207ENST00000465534 TSKSQ9UJT2 592 aa8.85□□□□□ -0.99
CD55-207ENST00000465534 NBR1Q14596 966 aa8.84□□□□□ -0.99
CD55-207ENST00000465534 TSR1Q2NL82 804 aaKnown RBP8.84□□□□□ -0.99
CD55-207ENST00000465534 MAP3K7O43318 606 aa8.83□□□□□ -1
CD55-207ENST00000465534 EN1Q05925 392 aaPredicted RBP8.83□□□□□ -1
CD55-207ENST00000465534 PACS2Q86VP3 889 aa8.83□□□□□ -1
CD55-207ENST00000465534 SMAPO00193 183 aa8.8□□□□□ -1
CD55-207ENST00000465534 PPP4CP60510 307 aa8.8□□□□□ -1
CD55-207ENST00000465534 PDIA6Q15084 440 aa8.79□□□□□ -1
CD55-207ENST00000465534 SAMD7Q7Z3H4 446 aa8.78□□□□□ -1
CD55-207ENST00000465534 CDCA7LQ96GN5 454 aa8.78□□□□□ -1
CD55-207ENST00000465534 TJAP1Q5JTD0 557 aa8.77□□□□□ -1.01
CD55-207ENST00000465534 FAM198AQ9UFP1 575 aa8.77□□□□□ -1.01
CD55-207ENST00000465534 SPDYE16A6NNV3 312 aaPredicted RBP8.76□□□□□ -1.01
CD55-207ENST00000465534 PRSS12P56730 875 aa8.76□□□□□ -1.01
CD55-207ENST00000465534 C3orf80F5H4A9 247 aa8.75□□□□□ -1.01
CD55-207ENST00000465534 GFRA3O60609 400 aa8.75□□□□□ -1.01
CD55-207ENST00000465534 PRIM1P49642 420 aaKnown RBP8.75□□□□□ -1.01
CD55-207ENST00000465534 LAPTM4AQ15012 233 aa8.75□□□□□ -1.01
CD55-207ENST00000465534 LCE2BO14633 110 aa8.73□□□□□ -1.01
CD55-207ENST00000465534 BBXQ8WY36 941 aaPredicted RBP8.73□□□□□ -1.01
CD55-207ENST00000465534 MTRQ99707 1265 aa8.73□□□□□ -1.01
CD55-207ENST00000465534 PRKD2Q9BZL6 878 aa8.73□□□□□ -1.01
CD55-207ENST00000465534 PNMA3Q9UL41 463 aa8.73□□□□□ -1.01
CD55-207ENST00000465534 GRXCR2A6NFK2 248 aa8.72□□□□□ -1.01
CD55-207ENST00000465534 CERKQ8TCT0 537 aa8.72□□□□□ -1.01
CD55-207ENST00000465534 TATDN2Q93075 761 aa8.72□□□□□ -1.01
CD55-207ENST00000465534 NBPF26B4DH59 902 aa8.71□□□□□ -1.01
CD55-207ENST00000465534 TRAF7Q6Q0C0 670 aa8.71□□□□□ -1.01
CD55-207ENST00000465534 IL21Q9HBE4 155 aa8.71□□□□□ -1.01
CD55-207ENST00000465534 RNF40O75150 1001 aa8.7□□□□□ -1.02
CD55-207ENST00000465534 PPP1R18Q6NYC8 613 aa8.7□□□□□ -1.02
CD55-207ENST00000465534 E2F4Q16254 413 aa8.7□□□□□ -1.02
CD55-207ENST00000465534 ZNF516Q92618 1163 aa8.7□□□□□ -1.02
CD55-207ENST00000465534 NUDT18Q6ZVK8 323 aa8.69□□□□□ -1.02
CD55-207ENST00000465534 CDHR5Q9HBB8 845 aa8.69□□□□□ -1.02
CD55-207ENST00000465534 APLP1P51693 650 aa8.67□□□□□ -1.02
CD55-207ENST00000465534 HDGFP51858 240 aaKnown RBP8.67□□□□□ -1.02
CD55-207ENST00000465534 SPRYD3Q8NCJ5 442 aa8.67□□□□□ -1.02
CD55-207ENST00000465534 OSBPP22059 807 aa8.66□□□□□ -1.02
CD55-207ENST00000465534 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.66□□□□□ -1.02
CD55-207ENST00000465534 NRG2O14511 850 aaPredicted RBP8.65□□□□□ -1.02
CD55-207ENST00000465534 ARIH1Q9Y4X5 557 aaPredicted RBP8.65□□□□□ -1.02
CD55-207ENST00000465534 V9GY48 417 aaPredicted RBP8.65□□□□□ -1.02
CD55-207ENST00000465534 NKX2-3Q8TAU0 364 aa8.64□□□□□ -1.03
CD55-207ENST00000465534 WDR70Q9NW82 654 aa8.64□□□□□ -1.03
CD55-207ENST00000465534 RBM27Q9P2N5 1060 aaKnown RBP8.63□□□□□ -1.03
CD55-207ENST00000465534 COPS2P61201 443 aa8.62□□□□□ -1.03
CD55-207ENST00000465534 SWT1Q5T5J6 900 aaKnown RBP8.62□□□□□ -1.03
CD55-207ENST00000465534 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.61□□□□□ -1.03
CD55-207ENST00000465534 PADI6Q6TGC4 694 aa8.6□□□□□ -1.03
CD55-207ENST00000465534 SLF2Q8IX21 1173 aa8.59□□□□□ -1.03
CD55-207ENST00000465534 TTC13Q8NBP0 860 aa8.59□□□□□ -1.03
CD55-207ENST00000465534 NPDC1Q9NQX5 325 aaPredicted RBP8.59□□□□□ -1.03
CD55-207ENST00000465534 PDZRN3Q9UPQ7 1066 aa8.59□□□□□ -1.03
CD55-207ENST00000465534 NECTIN2Q92692 538 aa8.58□□□□□ -1.04
CD55-207ENST00000465534 GGCXP38435 758 aa8.57□□□□□ -1.04
CD55-207ENST00000465534 CFAP44Q96MT7 982 aa8.57□□□□□ -1.04
CD55-207ENST00000465534 PAXIP1Q6ZW49 1069 aaPredicted RBP8.56□□□□□ -1.04
CD55-207ENST00000465534 ZPR1O75312 459 aa8.55□□□□□ -1.04
CD55-207ENST00000465534 ZNF787Q6DD87 383 aa8.55□□□□□ -1.04
CD55-207ENST00000465534 TMUB1Q9BVT8 246 aa8.54□□□□□ -1.04
CD55-207ENST00000465534 SLC4A3P48751 1232 aa8.53□□□□□ -1.04
CD55-207ENST00000465534 EYA1Q99502 592 aa8.53□□□□□ -1.04
CD55-207ENST00000465534 PCDHB3Q9Y5E6 796 aa8.52□□□□□ -1.05
CD55-207ENST00000465534 BLOC1S3Q6QNY0 202 aa8.51□□□□□ -1.05
CD55-207ENST00000465534 RNF223E7ERA6 249 aa8.5□□□□□ -1.05
CD55-207ENST00000465534 PRR14Q9BWN1 585 aa8.5□□□□□ -1.05
CD55-207ENST00000465534 SLC19A1P41440 591 aa8.49□□□□□ -1.05
CD55-207ENST00000465534 TRIM67Q6ZTA4 783 aa8.49□□□□□ -1.05
CD55-207ENST00000465534 TLL1O43897 1013 aa8.48□□□□□ -1.05
CD55-207ENST00000465534 MLLT3P42568 568 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms