RNA–Protein interactions for RNA: ENST00000460641.1

ITGAV-205, Transcript of integrin subunit alpha V, humanhuman

TSL 5

Gene ITGAV, Length 604 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-205ENST00000460641 KRTAP3-2Q9BYR7 98 aa13.73□□□□□ -0.21
ITGAV-205ENST00000460641 PSEN2P49810 448 aa13.72□□□□□ -0.21
ITGAV-205ENST00000460641 C6orf132Q5T0Z8 1188 aa13.72□□□□□ -0.21
ITGAV-205ENST00000460641 SMYD5Q6GMV2 418 aa13.72□□□□□ -0.21
ITGAV-205ENST00000460641 KCNK17Q96T54 332 aa13.72□□□□□ -0.21
ITGAV-205ENST00000460641 MAP3K7O43318 606 aa13.71□□□□□ -0.21
ITGAV-205ENST00000460641 PRIM1P49642 420 aaKnown RBP13.71□□□□□ -0.21
ITGAV-205ENST00000460641 LSM11P83369 360 aaKnown RBP eCLIP13.67□□□□□ -0.22
ITGAV-205ENST00000460641 TSR1Q2NL82 804 aaKnown RBP13.67□□□□□ -0.22
ITGAV-205ENST00000460641 DMRTA1Q5VZB9 504 aa13.66□□□□□ -0.22
ITGAV-205ENST00000460641 ANKRD13DQ6ZTN6 518 aa13.65□□□□□ -0.22
ITGAV-205ENST00000460641 PPP1R3GB7ZBB8 358 aa13.64□□□□□ -0.23
ITGAV-205ENST00000460641 TULP1O00294 542 aaPredicted RBP13.63□□□□□ -0.23
ITGAV-205ENST00000460641 COL9A1P20849 921 aa13.63□□□□□ -0.23
ITGAV-205ENST00000460641 RBM26Q5T8P6 1007 aaKnown RBP13.61□□□□□ -0.23
ITGAV-205ENST00000460641 TK2O00142 265 aa13.59□□□□□ -0.23
ITGAV-205ENST00000460641 ZBED2Q9BTP6 218 aa13.59□□□□□ -0.23
ITGAV-205ENST00000460641 SLC4A5Q9BY07 1137 aa13.59□□□□□ -0.23
ITGAV-205ENST00000460641 CDHR5Q9HBB8 845 aa13.59□□□□□ -0.23
ITGAV-205ENST00000460641 NUTM2FA1L443 756 aa13.58□□□□□ -0.24
ITGAV-205ENST00000460641 CERKQ8TCT0 537 aa13.58□□□□□ -0.24
ITGAV-205ENST00000460641 ADGRD1Q6QNK2 874 aa13.57□□□□□ -0.24
ITGAV-205ENST00000460641 BCANQ96GW7 911 aa13.56□□□□□ -0.24
ITGAV-205ENST00000460641 NPDC1Q9NQX5 325 aaPredicted RBP13.56□□□□□ -0.24
ITGAV-205ENST00000460641 VPS9D1Q9Y2B5 631 aa13.56□□□□□ -0.24
ITGAV-205ENST00000460641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.54□□□□□ -0.24
ITGAV-205ENST00000460641 PROX2Q3B8N5 592 aa13.53□□□□□ -0.24
ITGAV-205ENST00000460641 PTGDRQ13258 359 aa13.52□□□□□ -0.25
ITGAV-205ENST00000460641 PRSS12P56730 875 aa13.51□□□□□ -0.25
ITGAV-205ENST00000460641 SPNS2Q8IVW8 549 aa13.51□□□□□ -0.25
ITGAV-205ENST00000460641 CDCA7LQ96GN5 454 aa13.51□□□□□ -0.25
ITGAV-205ENST00000460641 ONECUT3O60422 494 aaPredicted RBP13.5□□□□□ -0.25
ITGAV-205ENST00000460641 TRIM6-TRIM34B2RNG4 842 aa13.49□□□□□ -0.25
ITGAV-205ENST00000460641 HRO43593 1189 aa13.49□□□□□ -0.25
ITGAV-205ENST00000460641 FCHSD2O94868 740 aa13.49□□□□□ -0.25
ITGAV-205ENST00000460641 RABGEF1Q9UJ41 708 aa13.48□□□□□ -0.25
ITGAV-205ENST00000460641 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
ITGAV-205ENST00000460641 GPIHBP1Q8IV16 184 aa13.47□□□□□ -0.25
ITGAV-205ENST00000460641 KIAA1468Q9P260 1216 aa13.47□□□□□ -0.25
ITGAV-205ENST00000460641 BHMG1C9JSJ3 638 aaPredicted RBP13.46□□□□□ -0.25
ITGAV-205ENST00000460641 STAC3Q96MF2 364 aa13.46□□□□□ -0.25
ITGAV-205ENST00000460641 RBM27Q9P2N5 1060 aaKnown RBP13.46□□□□□ -0.25
ITGAV-205ENST00000460641 TSKSQ9UJT2 592 aa13.46□□□□□ -0.25
ITGAV-205ENST00000460641 PACS2Q86VP3 889 aa13.45□□□□□ -0.26
ITGAV-205ENST00000460641 HIC1Q14526 733 aa13.43□□□□□ -0.26
ITGAV-205ENST00000460641 FAM198AQ9UFP1 575 aa13.43□□□□□ -0.26
ITGAV-205ENST00000460641 GPR37O15354 613 aa13.42□□□□□ -0.26
ITGAV-205ENST00000460641 PADI6Q6TGC4 694 aa13.42□□□□□ -0.26
ITGAV-205ENST00000460641 TTC13Q8NBP0 860 aa13.42□□□□□ -0.26
ITGAV-205ENST00000460641 NBPF3Q9H094 633 aa13.42□□□□□ -0.26
ITGAV-205ENST00000460641 MRPL50Q8N5N7 158 aaKnown RBP13.4□□□□□ -0.26
ITGAV-205ENST00000460641 GNPATO15228 680 aa13.39□□□□□ -0.27
ITGAV-205ENST00000460641 MYT1LQ9UL68 1186 aa13.39□□□□□ -0.27
ITGAV-205ENST00000460641 MMRN1Q13201 1228 aa13.37□□□□□ -0.27
ITGAV-205ENST00000460641 TATDN2Q93075 761 aa13.37□□□□□ -0.27
ITGAV-205ENST00000460641 LAPTM4BQ86VI4 370 aa13.36□□□□□ -0.27
ITGAV-205ENST00000460641 NBPF26B4DH59 902 aa13.35□□□□□ -0.27
ITGAV-205ENST00000460641 FECHP22830 423 aa13.35□□□□□ -0.27
ITGAV-205ENST00000460641 SEPT9Q9UHD8 586 aaPredicted RBP13.35□□□□□ -0.27
ITGAV-205ENST00000460641 PNMA3Q9UL41 463 aa13.35□□□□□ -0.27
ITGAV-205ENST00000460641 C3orf80F5H4A9 247 aa13.34□□□□□ -0.27
ITGAV-205ENST00000460641 NUDT18Q6ZVK8 323 aa13.34□□□□□ -0.27
ITGAV-205ENST00000460641 GOLGA8CPA6NN73 597 aa13.33□□□□□ -0.28
ITGAV-205ENST00000460641 SMAPO00193 183 aa13.33□□□□□ -0.28
ITGAV-205ENST00000460641 FAM98CQ17RN3 349 aaKnown RBP13.32□□□□□ -0.28
ITGAV-205ENST00000460641 ZC3H15Q8WU90 426 aaKnown RBP13.32□□□□□ -0.28
ITGAV-205ENST00000460641 PLSCR2Q9NRY7 297 aa13.31□□□□□ -0.28
ITGAV-205ENST00000460641 ADGRG1Q9Y653 693 aa13.31□□□□□ -0.28
ITGAV-205ENST00000460641 RNF166Q96A37 237 aaPredicted RBP13.3□□□□□ -0.28
ITGAV-205ENST00000460641 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
ITGAV-205ENST00000460641 ZFRQ96KR1 1074 aaKnown RBP13.29□□□□□ -0.28
ITGAV-205ENST00000460641 EYA1Q99502 592 aa13.29□□□□□ -0.28
ITGAV-205ENST00000460641 OATP04181 439 aa13.27□□□□□ -0.29
ITGAV-205ENST00000460641 RBM46Q8TBY0 533 aaKnown RBP13.27□□□□□ -0.29
ITGAV-205ENST00000460641 WNT2BQ93097 391 aa13.27□□□□□ -0.29
ITGAV-205ENST00000460641 KCTD12Q96CX2 325 aaKnown RBP13.27□□□□□ -0.29
ITGAV-205ENST00000460641 ZMYND10O75800 440 aa13.26□□□□□ -0.29
ITGAV-205ENST00000460641 MAP2K5Q13163 448 aa13.24□□□□□ -0.29
ITGAV-205ENST00000460641 BARGINQ6ZT62 677 aa13.24□□□□□ -0.29
ITGAV-205ENST00000460641 ANKK1Q8NFD2 765 aa13.24□□□□□ -0.29
ITGAV-205ENST00000460641 MINK1Q8N4C8 1332 aaPredicted RBP13.23□□□□□ -0.29
ITGAV-205ENST00000460641 IRF6O14896 467 aa13.22□□□□□ -0.29
ITGAV-205ENST00000460641 PXYLP1Q8TE99 480 aa13.22□□□□□ -0.29
ITGAV-205ENST00000460641 HDGFP51858 240 aaKnown RBP13.21□□□□□ -0.29
ITGAV-205ENST00000460641 METTL3Q86U44 580 aaKnown RBP13.21□□□□□ -0.29
ITGAV-205ENST00000460641 KRI1Q8N9T8 703 aaKnown RBP13.21□□□□□ -0.29
ITGAV-205ENST00000460641 THSD4Q6ZMP0 1018 aa13.19□□□□□ -0.3
ITGAV-205ENST00000460641 SAMD7Q7Z3H4 446 aa13.19□□□□□ -0.3
ITGAV-205ENST00000460641 RCCD1A6NED2 376 aa13.18□□□□□ -0.3
ITGAV-205ENST00000460641 SOWAHBA6NEL2 793 aa13.18□□□□□ -0.3
ITGAV-205ENST00000460641 DNAJB2P25686 324 aa13.18□□□□□ -0.3
ITGAV-205ENST00000460641 LRCH3Q96II8 777 aa13.18□□□□□ -0.3
ITGAV-205ENST00000460641 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
ITGAV-205ENST00000460641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.16□□□□□ -0.3
ITGAV-205ENST00000460641 BCAMP50895 628 aa13.16□□□□□ -0.3
ITGAV-205ENST00000460641 PTPN5P54829 565 aa13.15□□□□□ -0.3
ITGAV-205ENST00000460641 SWT1Q5T5J6 900 aaKnown RBP13.15□□□□□ -0.3
ITGAV-205ENST00000460641 CCDC102AQ96A19 550 aa13.15□□□□□ -0.3
ITGAV-205ENST00000460641 TMEM134Q9H6X4 195 aa13.15□□□□□ -0.3
ITGAV-205ENST00000460641 HCSTQ9UBK5 93 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms