RNA–Protein interactions for RNA: ENST00000453640.1

SSXP1-201, Transcript of SSX family pseudogene 1, humanhuman

BASIC

Gene SSXP1, Length 473 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP1-201ENST00000453640 RBM33Q96EV2 1170 aaKnown RBP9.81□□□□□ -0.84
SSXP1-201ENST00000453640 SEMA3EO15041 775 aa9.8□□□□□ -0.84
SSXP1-201ENST00000453640 OSBPP22059 807 aa9.8□□□□□ -0.84
SSXP1-201ENST00000453640 PTPREP23469 700 aa9.79□□□□□ -0.84
SSXP1-201ENST00000453640 EN1Q05925 392 aaPredicted RBP9.79□□□□□ -0.84
SSXP1-201ENST00000453640 COL9A1P20849 921 aa9.78□□□□□ -0.84
SSXP1-201ENST00000453640 C6orf132Q5T0Z8 1188 aa9.78□□□□□ -0.84
SSXP1-201ENST00000453640 TSR1Q2NL82 804 aaKnown RBP9.77□□□□□ -0.85
SSXP1-201ENST00000453640 PLSCR2Q9NRY7 297 aa9.76□□□□□ -0.85
SSXP1-201ENST00000453640 MAP3K7O43318 606 aa9.75□□□□□ -0.85
SSXP1-201ENST00000453640 ADGRD1Q6QNK2 874 aa9.75□□□□□ -0.85
SSXP1-201ENST00000453640 KCNH8Q96L42 1107 aa9.75□□□□□ -0.85
SSXP1-201ENST00000453640 ZBED2Q9BTP6 218 aa9.75□□□□□ -0.85
SSXP1-201ENST00000453640 TESPA1A2RU30 521 aaPredicted RBP9.74□□□□□ -0.85
SSXP1-201ENST00000453640 PPP1R3GB7ZBB8 358 aa9.74□□□□□ -0.85
SSXP1-201ENST00000453640 TK2O00142 265 aa9.74□□□□□ -0.85
SSXP1-201ENST00000453640 VPS9D1Q9Y2B5 631 aa9.73□□□□□ -0.85
SSXP1-201ENST00000453640 HRO43593 1189 aa9.72□□□□□ -0.85
SSXP1-201ENST00000453640 MMRN1Q13201 1228 aa9.72□□□□□ -0.85
SSXP1-201ENST00000453640 SLC4A5Q9BY07 1137 aa9.72□□□□□ -0.85
SSXP1-201ENST00000453640 CDHR5Q9HBB8 845 aa9.72□□□□□ -0.85
SSXP1-201ENST00000453640 PROX2Q3B8N5 592 aa9.71□□□□□ -0.86
SSXP1-201ENST00000453640 SLC24A1O60721 1099 aa9.69□□□□□ -0.86
SSXP1-201ENST00000453640 NPDC1Q9NQX5 325 aaPredicted RBP9.67□□□□□ -0.86
SSXP1-201ENST00000453640 BHMG1C9JSJ3 638 aaPredicted RBP9.66□□□□□ -0.86
SSXP1-201ENST00000453640 MYT1LQ9UL68 1186 aa9.66□□□□□ -0.86
SSXP1-201ENST00000453640 RBM26Q5T8P6 1007 aaKnown RBP9.65□□□□□ -0.86
SSXP1-201ENST00000453640 FAM198AQ9UFP1 575 aa9.64□□□□□ -0.87
SSXP1-201ENST00000453640 TSKSQ9UJT2 592 aa9.64□□□□□ -0.87
SSXP1-201ENST00000453640 TRIM6-TRIM34B2RNG4 842 aa9.63□□□□□ -0.87
SSXP1-201ENST00000453640 PRSS12P56730 875 aa9.63□□□□□ -0.87
SSXP1-201ENST00000453640 KIAA1468Q9P260 1216 aa9.63□□□□□ -0.87
SSXP1-201ENST00000453640 RABGEF1Q9UJ41 708 aa9.63□□□□□ -0.87
SSXP1-201ENST00000453640 SMYD5Q6GMV2 418 aa9.62□□□□□ -0.87
SSXP1-201ENST00000453640 CERKQ8TCT0 537 aa9.62□□□□□ -0.87
SSXP1-201ENST00000453640 CDCA7LQ96GN5 454 aa9.62□□□□□ -0.87
SSXP1-201ENST00000453640 NUTM2FA1L443 756 aa9.61□□□□□ -0.87
SSXP1-201ENST00000453640 ONECUT3O60422 494 aaPredicted RBP9.61□□□□□ -0.87
SSXP1-201ENST00000453640 RNF166Q96A37 237 aaPredicted RBP9.61□□□□□ -0.87
SSXP1-201ENST00000453640 C3orf80F5H4A9 247 aa9.6□□□□□ -0.87
SSXP1-201ENST00000453640 PTGDRQ13258 359 aa9.6□□□□□ -0.87
SSXP1-201ENST00000453640 PADI6Q6TGC4 694 aa9.58□□□□□ -0.88
SSXP1-201ENST00000453640 MRPL50Q8N5N7 158 aaKnown RBP9.58□□□□□ -0.88
SSXP1-201ENST00000453640 TTC13Q8NBP0 860 aa9.58□□□□□ -0.88
SSXP1-201ENST00000453640 GPR37O15354 613 aa9.57□□□□□ -0.88
SSXP1-201ENST00000453640 STAC3Q96MF2 364 aa9.57□□□□□ -0.88
SSXP1-201ENST00000453640 NBPF3Q9H094 633 aa9.57□□□□□ -0.88
SSXP1-201ENST00000453640 RBM27Q9P2N5 1060 aaKnown RBP9.57□□□□□ -0.88
SSXP1-201ENST00000453640 SEPT9Q9UHD8 586 aaPredicted RBP9.57□□□□□ -0.88
SSXP1-201ENST00000453640 PACS2Q86VP3 889 aa9.56□□□□□ -0.88
SSXP1-201ENST00000453640 FCHSD2O94868 740 aa9.55□□□□□ -0.88
SSXP1-201ENST00000453640 SMAPO00193 183 aa9.54□□□□□ -0.88
SSXP1-201ENST00000453640 KCTD12Q96CX2 325 aaKnown RBP9.54□□□□□ -0.88
SSXP1-201ENST00000453640 LAPTM4BQ86VI4 370 aa9.53□□□□□ -0.88
SSXP1-201ENST00000453640 TATDN2Q93075 761 aa9.53□□□□□ -0.88
SSXP1-201ENST00000453640 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.52□□□□□ -0.89
SSXP1-201ENST00000453640 FECHP22830 423 aa9.51□□□□□ -0.89
SSXP1-201ENST00000453640 FAM98CQ17RN3 349 aaKnown RBP9.51□□□□□ -0.89
SSXP1-201ENST00000453640 NUDT18Q6ZVK8 323 aa9.51□□□□□ -0.89
SSXP1-201ENST00000453640 GPIHBP1Q8IV16 184 aa9.51□□□□□ -0.89
SSXP1-201ENST00000453640 ZFRQ96KR1 1074 aaKnown RBP9.51□□□□□ -0.89
SSXP1-201ENST00000453640 PNMA3Q9UL41 463 aa9.51□□□□□ -0.89
SSXP1-201ENST00000453640 GOLGA8CPA6NN73 597 aa9.5□□□□□ -0.89
SSXP1-201ENST00000453640 NBPF26B4DH59 902 aa9.5□□□□□ -0.89
SSXP1-201ENST00000453640 HIC1Q14526 733 aa9.5□□□□□ -0.89
SSXP1-201ENST00000453640 WNT2BQ93097 391 aa9.5□□□□□ -0.89
SSXP1-201ENST00000453640 TULP1O00294 542 aaPredicted RBP9.49□□□□□ -0.89
SSXP1-201ENST00000453640 FAM161AQ3B820 660 aa9.49□□□□□ -0.89
SSXP1-201ENST00000453640 GNPATO15228 680 aa9.48□□□□□ -0.89
SSXP1-201ENST00000453640 THSD4Q6ZMP0 1018 aa9.48□□□□□ -0.89
SSXP1-201ENST00000453640 EYA1Q99502 592 aa9.48□□□□□ -0.89
SSXP1-201ENST00000453640 ADGRG1Q9Y653 693 aa9.48□□□□□ -0.89
SSXP1-201ENST00000453640 LMOD2Q6P5Q4 547 aa9.47□□□□□ -0.89
SSXP1-201ENST00000453640 BCAMP50895 628 aa9.46□□□□□ -0.9
SSXP1-201ENST00000453640 ANKK1Q8NFD2 765 aa9.46□□□□□ -0.9
SSXP1-201ENST00000453640 SOWAHBA6NEL2 793 aa9.44□□□□□ -0.9
SSXP1-201ENST00000453640 PTPN5P54829 565 aa9.44□□□□□ -0.9
SSXP1-201ENST00000453640 HCSTQ9UBK5 93 aa9.44□□□□□ -0.9
SSXP1-201ENST00000453640 SAMD7Q7Z3H4 446 aa9.43□□□□□ -0.9
SSXP1-201ENST00000453640 RBM46Q8TBY0 533 aaKnown RBP9.41□□□□□ -0.9
SSXP1-201ENST00000453640 LRCH3Q96II8 777 aa9.41□□□□□ -0.9
SSXP1-201ENST00000453640 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.41□□□□□ -0.9
SSXP1-201ENST00000453640 PXYLP1Q8TE99 480 aa9.4□□□□□ -0.9
SSXP1-201ENST00000453640 RCCD1A6NED2 376 aa9.39□□□□□ -0.91
SSXP1-201ENST00000453640 SWT1Q5T5J6 900 aaKnown RBP9.39□□□□□ -0.91
SSXP1-201ENST00000453640 METTL3Q86U44 580 aaKnown RBP9.39□□□□□ -0.91
SSXP1-201ENST00000453640 ZC3H15Q8WU90 426 aaKnown RBP9.38□□□□□ -0.91
SSXP1-201ENST00000453640 BCANQ96GW7 911 aa9.38□□□□□ -0.91
SSXP1-201ENST00000453640 WBP1LQ9NX94 342 aa9.38□□□□□ -0.91
SSXP1-201ENST00000453640 HPS5Q9UPZ3 1129 aa9.38□□□□□ -0.91
SSXP1-201ENST00000453640 OATP04181 439 aa9.37□□□□□ -0.91
SSXP1-201ENST00000453640 DNAJB2P25686 324 aa9.37□□□□□ -0.91
SSXP1-201ENST00000453640 PHOX2BQ99453 314 aa9.37□□□□□ -0.91
SSXP1-201ENST00000453640 TMEM134Q9H6X4 195 aa9.36□□□□□ -0.91
SSXP1-201ENST00000453640 TSR3Q9UJK0 312 aaKnown RBP9.36□□□□□ -0.91
SSXP1-201ENST00000453640 MAP2K5Q13163 448 aa9.35□□□□□ -0.91
SSXP1-201ENST00000453640 NLRP7Q8WX94 980 aa9.35□□□□□ -0.91
SSXP1-201ENST00000453640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.34□□□□□ -0.91
SSXP1-201ENST00000453640 IRF6O14896 467 aa9.34□□□□□ -0.91
SSXP1-201ENST00000453640 ZMYND10O75800 440 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms