RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 THSD4Q6ZMP0 1018 aa7.36□□□□□ -1.23
LRCH3-209ENST00000452660 LAPTM4BQ86VI4 370 aa7.36□□□□□ -1.23
LRCH3-209ENST00000452660 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.36□□□□□ -1.23
LRCH3-209ENST00000452660 ARIH1Q9Y4X5 557 aaPredicted RBP7.36□□□□□ -1.23
LRCH3-209ENST00000452660 GOLGA8CPA6NN73 597 aa7.35□□□□□ -1.23
LRCH3-209ENST00000452660 SPRYD3Q8NCJ5 442 aa7.35□□□□□ -1.23
LRCH3-209ENST00000452660 SPDYE16A6NNV3 312 aaPredicted RBP7.34□□□□□ -1.23
LRCH3-209ENST00000452660 NYAP1Q6ZVC0 841 aa7.33□□□□□ -1.24
LRCH3-209ENST00000452660 WNT2BQ93097 391 aa7.33□□□□□ -1.24
LRCH3-209ENST00000452660 PDIA6Q15084 440 aa7.32□□□□□ -1.24
LRCH3-209ENST00000452660 C6orf132Q5T0Z8 1188 aa7.31□□□□□ -1.24
LRCH3-209ENST00000452660 DPYSL4O14531 572 aa7.3□□□□□ -1.24
LRCH3-209ENST00000452660 COL9A1P20849 921 aa7.29□□□□□ -1.24
LRCH3-209ENST00000452660 ANKK1Q8NFD2 765 aa7.29□□□□□ -1.24
LRCH3-209ENST00000452660 PTPN5P54829 565 aa7.28□□□□□ -1.24
LRCH3-209ENST00000452660 TRIM6-TRIM34B2RNG4 842 aa7.27□□□□□ -1.25
LRCH3-209ENST00000452660 EN1Q05925 392 aaPredicted RBP7.27□□□□□ -1.25
LRCH3-209ENST00000452660 E2F4Q16254 413 aa7.27□□□□□ -1.25
LRCH3-209ENST00000452660 CERKQ8TCT0 537 aa7.27□□□□□ -1.25
LRCH3-209ENST00000452660 SOWAHBA6NEL2 793 aa7.26□□□□□ -1.25
LRCH3-209ENST00000452660 ITGBL1O95965 494 aaPredicted RBP7.26□□□□□ -1.25
LRCH3-209ENST00000452660 PROX2Q3B8N5 592 aa7.26□□□□□ -1.25
LRCH3-209ENST00000452660 FAM98CQ17RN3 349 aaKnown RBP7.25□□□□□ -1.25
LRCH3-209ENST00000452660 ZFRQ96KR1 1074 aaKnown RBP7.24□□□□□ -1.25
LRCH3-209ENST00000452660 WDR70Q9NW82 654 aa7.24□□□□□ -1.25
LRCH3-209ENST00000452660 KIAA1468Q9P260 1216 aa7.24□□□□□ -1.25
LRCH3-209ENST00000452660 A0A0G2JS52 829 aa7.23□□□□□ -1.25
LRCH3-209ENST00000452660 PACS2Q86VP3 889 aa7.22□□□□□ -1.25
LRCH3-209ENST00000452660 RBM27Q9P2N5 1060 aaKnown RBP7.22□□□□□ -1.25
LRCH3-209ENST00000452660 NBR1Q14596 966 aa7.21□□□□□ -1.26
LRCH3-209ENST00000452660 DDX12PQ92771 950 aa7.21□□□□□ -1.26
LRCH3-209ENST00000452660 MAP3K7O43318 606 aa7.2□□□□□ -1.26
LRCH3-209ENST00000452660 RTN4Q9NQC3 1192 aaKnown RBP7.2□□□□□ -1.26
LRCH3-209ENST00000452660 PAXIP1Q6ZW49 1069 aaPredicted RBP7.19□□□□□ -1.26
LRCH3-209ENST00000452660 RBM33Q96EV2 1170 aaKnown RBP7.19□□□□□ -1.26
LRCH3-209ENST00000452660 TSR3Q9UJK0 312 aaKnown RBP7.19□□□□□ -1.26
LRCH3-209ENST00000452660 PRSS12P56730 875 aa7.18□□□□□ -1.26
LRCH3-209ENST00000452660 LRCH3Q96II8 777 aa7.18□□□□□ -1.26
LRCH3-209ENST00000452660 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.18□□□□□ -1.26
LRCH3-209ENST00000452660 BCAMP50895 628 aa7.17□□□□□ -1.26
LRCH3-209ENST00000452660 TSKSQ9UJT2 592 aa7.17□□□□□ -1.26
LRCH3-209ENST00000452660 TSR1Q2NL82 804 aaKnown RBP7.16□□□□□ -1.26
LRCH3-209ENST00000452660 CDCA7LQ96GN5 454 aa7.16□□□□□ -1.26
LRCH3-209ENST00000452660 CFAP44Q96MT7 982 aa7.16□□□□□ -1.26
LRCH3-209ENST00000452660 SEPT9Q9UHD8 586 aaPredicted RBP7.16□□□□□ -1.26
LRCH3-209ENST00000452660 NBPF26B4DH59 902 aa7.15□□□□□ -1.26
LRCH3-209ENST00000452660 KCNC4Q03721 635 aa7.15□□□□□ -1.26
LRCH3-209ENST00000452660 NECTIN2Q92692 538 aa7.15□□□□□ -1.26
LRCH3-209ENST00000452660 OSBPP22059 807 aa7.14□□□□□ -1.27
LRCH3-209ENST00000452660 ARHGEF1Q92888 912 aaKnown RBP7.14□□□□□ -1.27
LRCH3-209ENST00000452660 WBP1LQ9NX94 342 aa7.14□□□□□ -1.27
LRCH3-209ENST00000452660 TTC13Q8NBP0 860 aa7.13□□□□□ -1.27
LRCH3-209ENST00000452660 HPS5Q9UPZ3 1129 aa7.13□□□□□ -1.27
LRCH3-209ENST00000452660 TATDN2Q93075 761 aa7.12□□□□□ -1.27
LRCH3-209ENST00000452660 GRXCR2A6NFK2 248 aa7.11□□□□□ -1.27
LRCH3-209ENST00000452660 PPP4CP60510 307 aa7.11□□□□□ -1.27
LRCH3-209ENST00000452660 PRIM1P49642 420 aaKnown RBP7.1□□□□□ -1.27
LRCH3-209ENST00000452660 HDGFP51858 240 aaKnown RBP7.1□□□□□ -1.27
LRCH3-209ENST00000452660 IRX2Q9BZI1 471 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-209ENST00000452660 FAM198AQ9UFP1 575 aa7.09□□□□□ -1.27
LRCH3-209ENST00000452660 PNMA3Q9UL41 463 aa7.08□□□□□ -1.28
LRCH3-209ENST00000452660 SAMD7Q7Z3H4 446 aa7.07□□□□□ -1.28
LRCH3-209ENST00000452660 NPDC1Q9NQX5 325 aaPredicted RBP7.07□□□□□ -1.28
LRCH3-209ENST00000452660 TJAP1Q5JTD0 557 aa7.06□□□□□ -1.28
LRCH3-209ENST00000452660 P3H3Q8IVL6 736 aa7.06□□□□□ -1.28
LRCH3-209ENST00000452660 CDHR5Q9HBB8 845 aa7.06□□□□□ -1.28
LRCH3-209ENST00000452660 SLC4A3P48751 1232 aa7.05□□□□□ -1.28
LRCH3-209ENST00000452660 SLF2Q8IX21 1173 aa7.05□□□□□ -1.28
LRCH3-209ENST00000452660 IL21Q9HBE4 155 aa7.05□□□□□ -1.28
LRCH3-209ENST00000452660 LAPTM4AQ15012 233 aa7.04□□□□□ -1.28
LRCH3-209ENST00000452660 NUDT18Q6ZVK8 323 aa7.04□□□□□ -1.28
LRCH3-209ENST00000452660 PRR14Q9BWN1 585 aa7.04□□□□□ -1.28
LRCH3-209ENST00000452660 SMAPO00193 183 aa7.03□□□□□ -1.28
LRCH3-209ENST00000452660 C3orf80F5H4A9 247 aa7.02□□□□□ -1.29
LRCH3-209ENST00000452660 PADI6Q6TGC4 694 aa7.02□□□□□ -1.29
LRCH3-209ENST00000452660 EYA1Q99502 592 aa7.02□□□□□ -1.29
LRCH3-209ENST00000452660 KCNV2Q8TDN2 545 aa7.01□□□□□ -1.29
LRCH3-209ENST00000452660 MTRQ99707 1265 aa7.01□□□□□ -1.29
LRCH3-209ENST00000452660 TSHZ2Q9NRE2 1034 aa7.01□□□□□ -1.29
LRCH3-209ENST00000452660 PTGDRQ13258 359 aa7□□□□□ -1.29
LRCH3-209ENST00000452660 V9GY48 417 aaPredicted RBP7□□□□□ -1.29
LRCH3-209ENST00000452660 TMUB1Q9BVT8 246 aa6.99□□□□□ -1.29
LRCH3-209ENST00000452660 DNAJB2P25686 324 aa6.98□□□□□ -1.29
LRCH3-209ENST00000452660 APLP1P51693 650 aa6.98□□□□□ -1.29
LRCH3-209ENST00000452660 SWT1Q5T5J6 900 aaKnown RBP6.98□□□□□ -1.29
LRCH3-209ENST00000452660 RBM46Q8TBY0 533 aaKnown RBP6.98□□□□□ -1.29
LRCH3-209ENST00000452660 GGCXP38435 758 aa6.97□□□□□ -1.29
LRCH3-209ENST00000452660 MLLT3P42568 568 aaPredicted RBP6.97□□□□□ -1.29
LRCH3-209ENST00000452660 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.96□□□□□ -1.3
LRCH3-209ENST00000452660 TMEM134Q9H6X4 195 aa6.95□□□□□ -1.3
LRCH3-209ENST00000452660 ADGRG1Q9Y653 693 aa6.95□□□□□ -1.3
LRCH3-209ENST00000452660 RNF40O75150 1001 aa6.94□□□□□ -1.3
LRCH3-209ENST00000452660 FCHSD2O94868 740 aa6.94□□□□□ -1.3
LRCH3-209ENST00000452660 PPP1R18Q6NYC8 613 aa6.94□□□□□ -1.3
LRCH3-209ENST00000452660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.93□□□□□ -1.3
LRCH3-209ENST00000452660 ZPR1O75312 459 aa6.93□□□□□ -1.3
LRCH3-209ENST00000452660 OATP04181 439 aa6.92□□□□□ -1.3
LRCH3-209ENST00000452660 SMYD5Q6GMV2 418 aa6.92□□□□□ -1.3
LRCH3-209ENST00000452660 NRG2O14511 850 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-209ENST00000452660 ACTN4O43707 911 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms