RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 HRCP23327 699 aa6.73□□□□□ -1.33
PMS1-216ENST00000447734 GPBP1L1Q9HC44 474 aaPredicted RBP6.73□□□□□ -1.33
PMS1-216ENST00000447734 BARGINQ6ZT62 677 aa6.72□□□□□ -1.33
PMS1-216ENST00000447734 IL27Q8NEV9 243 aa6.72□□□□□ -1.33
PMS1-216ENST00000447734 PSDA5PKW4 1024 aaPredicted RBP6.71□□□□□ -1.34
PMS1-216ENST00000447734 KCTD12Q96CX2 325 aaKnown RBP6.71□□□□□ -1.34
PMS1-216ENST00000447734 AK7Q96M32 723 aa6.71□□□□□ -1.34
PMS1-216ENST00000447734 FOXK1P85037 733 aa6.7□□□□□ -1.34
PMS1-216ENST00000447734 PLPP6Q8IY26 295 aa6.68□□□□□ -1.34
PMS1-216ENST00000447734 KRI1Q8N9T8 703 aaKnown RBP6.68□□□□□ -1.34
PMS1-216ENST00000447734 KDM4CQ9H3R0 1056 aa6.68□□□□□ -1.34
PMS1-216ENST00000447734 DSG2Q14126 1118 aa6.67□□□□□ -1.34
PMS1-216ENST00000447734 PPP4R3BQ5MIZ7 849 aa6.66□□□□□ -1.34
PMS1-216ENST00000447734 GPIHBP1Q8IV16 184 aa6.66□□□□□ -1.34
PMS1-216ENST00000447734 GPHNQ9NQX3 736 aaPredicted RBP6.66□□□□□ -1.34
PMS1-216ENST00000447734 VPS9D1Q9Y2B5 631 aa6.66□□□□□ -1.34
PMS1-216ENST00000447734 KCNK17Q96T54 332 aa6.65□□□□□ -1.34
PMS1-216ENST00000447734 C1orf115Q9H7X2 142 aa6.65□□□□□ -1.34
PMS1-216ENST00000447734 ZBTB7CA1YPR0 619 aa6.64□□□□□ -1.35
PMS1-216ENST00000447734 BHMG1C9JSJ3 638 aaPredicted RBP6.64□□□□□ -1.35
PMS1-216ENST00000447734 IFFO2Q5TF58 517 aa6.64□□□□□ -1.35
PMS1-216ENST00000447734 PDIA4P13667 645 aaKnown RBP6.63□□□□□ -1.35
PMS1-216ENST00000447734 CCDC9Q9Y3X0 531 aaKnown RBP6.63□□□□□ -1.35
PMS1-216ENST00000447734 ARID3CA6NKF2 412 aa6.62□□□□□ -1.35
PMS1-216ENST00000447734 APBB1O00213 710 aa6.62□□□□□ -1.35
PMS1-216ENST00000447734 PTPN5P54829 565 aa6.62□□□□□ -1.35
PMS1-216ENST00000447734 PDE4DQ08499 809 aa6.62□□□□□ -1.35
PMS1-216ENST00000447734 LARP6Q9BRS8 491 aaKnown RBP6.62□□□□□ -1.35
PMS1-216ENST00000447734 TRIM66O15016 1216 aa6.61□□□□□ -1.35
PMS1-216ENST00000447734 THSD4Q6ZMP0 1018 aa6.61□□□□□ -1.35
PMS1-216ENST00000447734 OXER1Q8TDS5 423 aa6.61□□□□□ -1.35
PMS1-216ENST00000447734 ARIH1Q9Y4X5 557 aaPredicted RBP6.61□□□□□ -1.35
PMS1-216ENST00000447734 NCKAP5LQ9HCH0 1330 aa6.6□□□□□ -1.35
PMS1-216ENST00000447734 PDE4AP27815 886 aa6.6□□□□□ -1.35
PMS1-216ENST00000447734 RBM26Q5T8P6 1007 aaKnown RBP6.6□□□□□ -1.35
PMS1-216ENST00000447734 SLC4A5Q9BY07 1137 aa6.6□□□□□ -1.35
PMS1-216ENST00000447734 BCL2L12Q9HB09 334 aa6.6□□□□□ -1.35
PMS1-216ENST00000447734 A0A0G2JS52 829 aa6.59□□□□□ -1.35
PMS1-216ENST00000447734 RGS20O76081 388 aa6.59□□□□□ -1.35
PMS1-216ENST00000447734 FLIIQ13045 1269 aa6.59□□□□□ -1.35
PMS1-216ENST00000447734 UPF1Q92900 1129 aaKnown RBP eCLIP6.59□□□□□ -1.35
PMS1-216ENST00000447734 MFSD10Q14728 455 aa6.58□□□□□ -1.36
PMS1-216ENST00000447734 DDX27Q96GQ7 796 aaKnown RBP6.58□□□□□ -1.36
PMS1-216ENST00000447734 ZBED2Q9BTP6 218 aa6.58□□□□□ -1.36
PMS1-216ENST00000447734 FOSBP53539 338 aa6.57□□□□□ -1.36
PMS1-216ENST00000447734 ZNF454Q8N9F8 522 aa6.57□□□□□ -1.36
PMS1-216ENST00000447734 TBC1D12O60347 775 aa6.56□□□□□ -1.36
PMS1-216ENST00000447734 MLLT3P42568 568 aaPredicted RBP6.56□□□□□ -1.36
PMS1-216ENST00000447734 STAC3Q96MF2 364 aa6.56□□□□□ -1.36
PMS1-216ENST00000447734 IRX2Q9BZI1 471 aaPredicted RBP6.56□□□□□ -1.36
PMS1-216ENST00000447734 FAM117AQ9C073 453 aa6.56□□□□□ -1.36
PMS1-216ENST00000447734 DDRGK1Q96HY6 314 aa6.55□□□□□ -1.36
PMS1-216ENST00000447734 CRISPLD2Q9H0B8 497 aa6.55□□□□□ -1.36
PMS1-216ENST00000447734 CAMK2BQ13554 666 aa6.54□□□□□ -1.36
PMS1-216ENST00000447734 CCDC82Q8N4S0 544 aa6.54□□□□□ -1.36
PMS1-216ENST00000447734 WNT2BQ93097 391 aa6.53□□□□□ -1.36
PMS1-216ENST00000447734 KCNH8Q96L42 1107 aa6.53□□□□□ -1.36
PMS1-216ENST00000447734 ADAM33Q9BZ11 813 aa6.53□□□□□ -1.36
PMS1-216ENST00000447734 ANO8Q9HCE9 1232 aaPredicted RBP6.53□□□□□ -1.36
PMS1-216ENST00000447734 PTPREP23469 700 aa6.52□□□□□ -1.37
PMS1-216ENST00000447734 PLEKHG3A1L390 1219 aa6.51□□□□□ -1.37
PMS1-216ENST00000447734 NECTIN2Q92692 538 aa6.51□□□□□ -1.37
PMS1-216ENST00000447734 JPH4Q96JJ6 628 aa6.51□□□□□ -1.37
PMS1-216ENST00000447734 PPP1R15BQ5SWA1 713 aa6.5□□□□□ -1.37
PMS1-216ENST00000447734 MRPL50Q8N5N7 158 aaKnown RBP6.5□□□□□ -1.37
PMS1-216ENST00000447734 A6NJR5 290 aa6.49□□□□□ -1.37
PMS1-216ENST00000447734 ITGBL1O95965 494 aaPredicted RBP6.49□□□□□ -1.37
PMS1-216ENST00000447734 LCE2BO14633 110 aa6.48□□□□□ -1.37
PMS1-216ENST00000447734 TRAK2O60296 914 aa6.48□□□□□ -1.37
PMS1-216ENST00000447734 ZDHHC16Q969W1 377 aa6.48□□□□□ -1.37
PMS1-216ENST00000447734 CLUAP1Q96AJ1 413 aa6.48□□□□□ -1.37
PMS1-216ENST00000447734 MINK1Q8N4C8 1332 aaPredicted RBP6.48□□□□□ -1.37
PMS1-216ENST00000447734 ONECUT3O60422 494 aaPredicted RBP6.47□□□□□ -1.37
PMS1-216ENST00000447734 EVI5O60447 810 aa6.47□□□□□ -1.37
PMS1-216ENST00000447734 PROX2Q3B8N5 592 aa6.47□□□□□ -1.37
PMS1-216ENST00000447734 CCDC102AQ96A19 550 aa6.47□□□□□ -1.37
PMS1-216ENST00000447734 GPR37O15354 613 aa6.46□□□□□ -1.38
PMS1-216ENST00000447734 COL9A1P20849 921 aa6.46□□□□□ -1.38
PMS1-216ENST00000447734 PARP9Q8IXQ6 854 aa6.46□□□□□ -1.38
PMS1-216ENST00000447734 KCTD17Q8N5Z5 321 aa6.46□□□□□ -1.38
PMS1-216ENST00000447734 GOPCQ9HD26 462 aa6.46□□□□□ -1.38
PMS1-216ENST00000447734 GOLGA8CPA6NN73 597 aa6.45□□□□□ -1.38
PMS1-216ENST00000447734 SPDYE16A6NNV3 312 aaPredicted RBP6.45□□□□□ -1.38
PMS1-216ENST00000447734 DPYSL4O14531 572 aa6.45□□□□□ -1.38
PMS1-216ENST00000447734 BCAMP50895 628 aa6.45□□□□□ -1.38
PMS1-216ENST00000447734 MAP2K5Q13163 448 aa6.45□□□□□ -1.38
PMS1-216ENST00000447734 AMHR2Q16671 573 aa6.45□□□□□ -1.38
PMS1-216ENST00000447734 NBPF3Q9H094 633 aa6.45□□□□□ -1.38
PMS1-216ENST00000447734 PCDHGA10Q9Y5H3 936 aa6.45□□□□□ -1.38
PMS1-216ENST00000447734 PPP1R3GB7ZBB8 358 aa6.44□□□□□ -1.38
PMS1-216ENST00000447734 RABGEF1Q9UJ41 708 aa6.44□□□□□ -1.38
PMS1-216ENST00000447734 PDIA6Q15084 440 aa6.43□□□□□ -1.38
PMS1-216ENST00000447734 PCMTD1Q96MG8 357 aaPredicted RBP6.43□□□□□ -1.38
PMS1-216ENST00000447734 TRAIPQ9BWF2 469 aa6.43□□□□□ -1.38
PMS1-216ENST00000447734 EMILIN3Q9NT22 766 aa6.43□□□□□ -1.38
PMS1-216ENST00000447734 SOWAHBA6NEL2 793 aa6.42□□□□□ -1.38
PMS1-216ENST00000447734 IRF6O14896 467 aa6.42□□□□□ -1.38
PMS1-216ENST00000447734 NUTM2FA1L443 756 aa6.41□□□□□ -1.38
PMS1-216ENST00000447734 TTLL12Q14166 644 aaPredicted RBP6.41□□□□□ -1.38
PMS1-216ENST00000447734 MCM6Q14566 821 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms