RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 NPDC1Q9NQX5 325 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P16-201ENST00000447155 ZNF454Q8N9F8 522 aa9.13□□□□□ -0.95
HMGB1P16-201ENST00000447155 KHSRPQ92945 711 aaKnown RBP eCLIP9.13□□□□□ -0.95
HMGB1P16-201ENST00000447155 DAXXQ9UER7 740 aaPredicted RBP9.13□□□□□ -0.95
HMGB1P16-201ENST00000447155 GTF3C3Q9Y5Q9 886 aa9.13□□□□□ -0.95
HMGB1P16-201ENST00000447155 SNPHO15079 494 aa9.12□□□□□ -0.95
HMGB1P16-201ENST00000447155 AMHR2Q16671 573 aa9.12□□□□□ -0.95
HMGB1P16-201ENST00000447155 TSR1Q2NL82 804 aaKnown RBP9.12□□□□□ -0.95
HMGB1P16-201ENST00000447155 ZDHHC16Q969W1 377 aa9.12□□□□□ -0.95
HMGB1P16-201ENST00000447155 KDM4CQ9H3R0 1056 aa9.12□□□□□ -0.95
HMGB1P16-201ENST00000447155 CERKQ8TCT0 537 aa9.1□□□□□ -0.95
HMGB1P16-201ENST00000447155 C6orf132Q5T0Z8 1188 aa9.09□□□□□ -0.95
HMGB1P16-201ENST00000447155 PSDA5PKW4 1024 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P16-201ENST00000447155 ADAM33Q9BZ11 813 aa9.07□□□□□ -0.96
HMGB1P16-201ENST00000447155 LHX6Q9UPM6 363 aa9.07□□□□□ -0.96
HMGB1P16-201ENST00000447155 PPP4R3BQ5MIZ7 849 aa9.06□□□□□ -0.96
HMGB1P16-201ENST00000447155 PARP9Q8IXQ6 854 aa9.06□□□□□ -0.96
HMGB1P16-201ENST00000447155 RBM27Q9P2N5 1060 aaKnown RBP9.06□□□□□ -0.96
HMGB1P16-201ENST00000447155 HOXB1P14653 301 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P16-201ENST00000447155 TTLL12Q14166 644 aaPredicted RBP9.03□□□□□ -0.96
HMGB1P16-201ENST00000447155 IL27Q8NEV9 243 aa9.03□□□□□ -0.96
HMGB1P16-201ENST00000447155 OTUD5Q96G74 571 aa9.03□□□□□ -0.96
HMGB1P16-201ENST00000447155 BCL2L12Q9HB09 334 aa9.03□□□□□ -0.96
HMGB1P16-201ENST00000447155 PADI6Q6TGC4 694 aa9.02□□□□□ -0.97
HMGB1P16-201ENST00000447155 TTC13Q8NBP0 860 aa9.02□□□□□ -0.97
HMGB1P16-201ENST00000447155 DDRGK1Q96HY6 314 aa9.02□□□□□ -0.97
HMGB1P16-201ENST00000447155 OATP04181 439 aa9.01□□□□□ -0.97
HMGB1P16-201ENST00000447155 ERICH6Q7L0X2 663 aa9.01□□□□□ -0.97
HMGB1P16-201ENST00000447155 FAM117AQ9C073 453 aa9.01□□□□□ -0.97
HMGB1P16-201ENST00000447155 PRSS12P56730 875 aa9□□□□□ -0.97
HMGB1P16-201ENST00000447155 CLCN1P35523 988 aa8.99□□□□□ -0.97
HMGB1P16-201ENST00000447155 GIGYF2Q6Y7W6 1299 aaKnown RBP8.99□□□□□ -0.97
HMGB1P16-201ENST00000447155 CDCA7LQ96GN5 454 aa8.99□□□□□ -0.97
HMGB1P16-201ENST00000447155 ADGRG1Q9Y653 693 aa8.99□□□□□ -0.97
HMGB1P16-201ENST00000447155 PPP1R3GB7ZBB8 358 aa8.98□□□□□ -0.97
HMGB1P16-201ENST00000447155 PTPREP23469 700 aa8.98□□□□□ -0.97
HMGB1P16-201ENST00000447155 LHX8Q68G74 356 aa8.98□□□□□ -0.97
HMGB1P16-201ENST00000447155 METTL3Q86U44 580 aaKnown RBP8.98□□□□□ -0.97
HMGB1P16-201ENST00000447155 TMUB1Q9BVT8 246 aa8.98□□□□□ -0.97
HMGB1P16-201ENST00000447155 MDM2Q00987 491 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P16-201ENST00000447155 FAM161AQ3B820 660 aa8.97□□□□□ -0.97
HMGB1P16-201ENST00000447155 PXYLP1Q8TE99 480 aa8.97□□□□□ -0.97
HMGB1P16-201ENST00000447155 PHOX2BQ99453 314 aa8.97□□□□□ -0.97
HMGB1P16-201ENST00000447155 REPIN1Q9BWE0 567 aaKnown RBP8.97□□□□□ -0.97
HMGB1P16-201ENST00000447155 GPCPD1Q9NPB8 672 aa8.97□□□□□ -0.97
HMGB1P16-201ENST00000447155 PLEKHG3A1L390 1219 aa8.96□□□□□ -0.98
HMGB1P16-201ENST00000447155 COL9A1P20849 921 aa8.96□□□□□ -0.98
HMGB1P16-201ENST00000447155 RBM46Q8TBY0 533 aaKnown RBP8.95□□□□□ -0.98
HMGB1P16-201ENST00000447155 TIMELESSQ9UNS1 1208 aa8.95□□□□□ -0.98
HMGB1P16-201ENST00000447155 MS4A1P11836 297 aa8.94□□□□□ -0.98
HMGB1P16-201ENST00000447155 FAM198AQ9UFP1 575 aa8.93□□□□□ -0.98
HMGB1P16-201ENST00000447155 KCNH8Q96L42 1107 aa8.92□□□□□ -0.98
HMGB1P16-201ENST00000447155 TRIM6-TRIM34B2RNG4 842 aa8.91□□□□□ -0.98
HMGB1P16-201ENST00000447155 SSTR3P32745 418 aaPredicted RBP8.91□□□□□ -0.98
HMGB1P16-201ENST00000447155 GOPCQ9HD26 462 aa8.91□□□□□ -0.98
HMGB1P16-201ENST00000447155 TSKSQ9UJT2 592 aa8.91□□□□□ -0.98
HMGB1P16-201ENST00000447155 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.9□□□□□ -0.98
HMGB1P16-201ENST00000447155 NBPF26B4DH59 902 aa8.9□□□□□ -0.98
HMGB1P16-201ENST00000447155 ONECUT3O60422 494 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P16-201ENST00000447155 PACS2Q86VP3 889 aa8.9□□□□□ -0.98
HMGB1P16-201ENST00000447155 NLRP7Q8WX94 980 aa8.9□□□□□ -0.98
HMGB1P16-201ENST00000447155 KCNK17Q96T54 332 aa8.9□□□□□ -0.98
HMGB1P16-201ENST00000447155 EYA1Q99502 592 aa8.9□□□□□ -0.98
HMGB1P16-201ENST00000447155 FAM217BQ9NTX9 383 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P16-201ENST00000447155 ERBB3P21860 1342 aa8.89□□□□□ -0.99
HMGB1P16-201ENST00000447155 PLSCR2Q9NRY7 297 aa8.89□□□□□ -0.99
HMGB1P16-201ENST00000447155 C14orf37Q86TY3 774 aa8.88□□□□□ -0.99
HMGB1P16-201ENST00000447155 RCCD1A6NED2 376 aa8.87□□□□□ -0.99
HMGB1P16-201ENST00000447155 VARS2Q5ST30 1063 aaKnown RBP8.87□□□□□ -0.99
HMGB1P16-201ENST00000447155 NUDT18Q6ZVK8 323 aa8.87□□□□□ -0.99
HMGB1P16-201ENST00000447155 TATDN2Q93075 761 aa8.87□□□□□ -0.99
HMGB1P16-201ENST00000447155 ST18O60284 1047 aa8.86□□□□□ -0.99
HMGB1P16-201ENST00000447155 PROX2Q3B8N5 592 aa8.86□□□□□ -0.99
HMGB1P16-201ENST00000447155 BEGAINQ9BUH8 593 aa8.86□□□□□ -0.99
HMGB1P16-201ENST00000447155 PNMA3Q9UL41 463 aa8.86□□□□□ -0.99
HMGB1P16-201ENST00000447155 C3orf80F5H4A9 247 aa8.85□□□□□ -0.99
HMGB1P16-201ENST00000447155 ARHGAP33O14559 1287 aa8.85□□□□□ -0.99
HMGB1P16-201ENST00000447155 DNAJB2P25686 324 aa8.85□□□□□ -0.99
HMGB1P16-201ENST00000447155 EMP3P54852 163 aa8.85□□□□□ -0.99
HMGB1P16-201ENST00000447155 ZBED2Q9BTP6 218 aa8.85□□□□□ -0.99
HMGB1P16-201ENST00000447155 RSPH6AQ9H0K4 717 aa8.85□□□□□ -0.99
HMGB1P16-201ENST00000447155 PBX2P40425 430 aa8.84□□□□□ -0.99
HMGB1P16-201ENST00000447155 PSEN2P49810 448 aa8.84□□□□□ -0.99
HMGB1P16-201ENST00000447155 SH3D19Q5HYK7 790 aa8.84□□□□□ -0.99
HMGB1P16-201ENST00000447155 PCMTD1Q96MG8 357 aaPredicted RBP8.84□□□□□ -0.99
HMGB1P16-201ENST00000447155 SLC4A5Q9BY07 1137 aa8.84□□□□□ -0.99
HMGB1P16-201ENST00000447155 TMEM134Q9H6X4 195 aa8.83□□□□□ -1
HMGB1P16-201ENST00000447155 KIAA1468Q9P260 1216 aa8.83□□□□□ -1
HMGB1P16-201ENST00000447155 SULF1Q8IWU6 871 aa8.82□□□□□ -1
HMGB1P16-201ENST00000447155 SKIV2LQ15477 1246 aaKnown RBP8.81□□□□□ -1
HMGB1P16-201ENST00000447155 POTEEQ6S8J3 1075 aa8.81□□□□□ -1
HMGB1P16-201ENST00000447155 MARVELD3Q96A59 401 aa8.81□□□□□ -1
HMGB1P16-201ENST00000447155 SMAPO00193 183 aa8.8□□□□□ -1
HMGB1P16-201ENST00000447155 DIXDC1Q155Q3 683 aa8.8□□□□□ -1
HMGB1P16-201ENST00000447155 ZNF687Q8N1G0 1237 aa8.8□□□□□ -1
HMGB1P16-201ENST00000447155 RABGEF1Q9UJ41 708 aa8.8□□□□□ -1
HMGB1P16-201ENST00000447155 FAM205CA6NFA0 338 aa8.79□□□□□ -1
HMGB1P16-201ENST00000447155 CD46P15529 392 aa8.79□□□□□ -1
HMGB1P16-201ENST00000447155 DDX11L8A8MPP1 907 aa8.78□□□□□ -1
HMGB1P16-201ENST00000447155 DMRTA1Q5VZB9 504 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms