RNA–Protein interactions for RNA: ENST00000446015.6

AP1S3-208, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene AP1S3, Length 499 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-208ENST00000446015 LSM11P83369 360 aaKnown RBP eCLIP8.94□□□□□ -0.98
AP1S3-208ENST00000446015 KCNK17Q96T54 332 aa8.94□□□□□ -0.98
AP1S3-208ENST00000446015 SLC4A5Q9BY07 1137 aa8.94□□□□□ -0.98
AP1S3-208ENST00000446015 OSBPP22059 807 aa8.93□□□□□ -0.98
AP1S3-208ENST00000446015 C6orf132Q5T0Z8 1188 aa8.93□□□□□ -0.98
AP1S3-208ENST00000446015 MLLT3P42568 568 aaPredicted RBP8.91□□□□□ -0.98
AP1S3-208ENST00000446015 KRTAP3-3Q9BYR6 98 aa8.91□□□□□ -0.98
AP1S3-208ENST00000446015 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
AP1S3-208ENST00000446015 RBM27Q9P2N5 1060 aaKnown RBP8.91□□□□□ -0.98
AP1S3-208ENST00000446015 ONECUT3O60422 494 aaPredicted RBP8.9□□□□□ -0.98
AP1S3-208ENST00000446015 RBM33Q96EV2 1170 aaKnown RBP8.89□□□□□ -0.99
AP1S3-208ENST00000446015 BCANQ96GW7 911 aa8.89□□□□□ -0.99
AP1S3-208ENST00000446015 PSEN2P49810 448 aa8.87□□□□□ -0.99
AP1S3-208ENST00000446015 ADGRD1Q6QNK2 874 aa8.87□□□□□ -0.99
AP1S3-208ENST00000446015 POTEEQ6S8J3 1075 aa8.87□□□□□ -0.99
AP1S3-208ENST00000446015 ZBED2Q9BTP6 218 aa8.87□□□□□ -0.99
AP1S3-208ENST00000446015 NBPF3Q9H094 633 aa8.87□□□□□ -0.99
AP1S3-208ENST00000446015 AXIN2Q9Y2T1 843 aa8.87□□□□□ -0.99
AP1S3-208ENST00000446015 ANKRD13DQ6ZTN6 518 aa8.85□□□□□ -0.99
AP1S3-208ENST00000446015 STAC3Q96MF2 364 aa8.85□□□□□ -0.99
AP1S3-208ENST00000446015 FCHSD2O94868 740 aa8.84□□□□□ -0.99
AP1S3-208ENST00000446015 TSR1Q2NL82 804 aaKnown RBP8.84□□□□□ -0.99
AP1S3-208ENST00000446015 DMRTA1Q5VZB9 504 aa8.84□□□□□ -0.99
AP1S3-208ENST00000446015 RABGEF1Q9UJ41 708 aa8.84□□□□□ -0.99
AP1S3-208ENST00000446015 NUTM2FA1L443 756 aa8.83□□□□□ -1
AP1S3-208ENST00000446015 VPS9D1Q9Y2B5 631 aa8.83□□□□□ -1
AP1S3-208ENST00000446015 TRIM6-TRIM34B2RNG4 842 aa8.82□□□□□ -1
AP1S3-208ENST00000446015 COL9A1P20849 921 aa8.82□□□□□ -1
AP1S3-208ENST00000446015 PRSS12P56730 875 aa8.82□□□□□ -1
AP1S3-208ENST00000446015 HIC1Q14526 733 aa8.82□□□□□ -1
AP1S3-208ENST00000446015 PACS2Q86VP3 889 aa8.82□□□□□ -1
AP1S3-208ENST00000446015 GPIHBP1Q8IV16 184 aa8.82□□□□□ -1
AP1S3-208ENST00000446015 PLSCR2Q9NRY7 297 aa8.82□□□□□ -1
AP1S3-208ENST00000446015 PTGDRQ13258 359 aa8.81□□□□□ -1
AP1S3-208ENST00000446015 LAPTM4BQ86VI4 370 aa8.81□□□□□ -1
AP1S3-208ENST00000446015 NBPF26B4DH59 902 aa8.8□□□□□ -1
AP1S3-208ENST00000446015 PRIM1P49642 420 aaKnown RBP8.8□□□□□ -1
AP1S3-208ENST00000446015 CDCA7LQ96GN5 454 aa8.8□□□□□ -1
AP1S3-208ENST00000446015 HRO43593 1189 aa8.79□□□□□ -1
AP1S3-208ENST00000446015 RBM26Q5T8P6 1007 aaKnown RBP8.79□□□□□ -1
AP1S3-208ENST00000446015 MRPL50Q8N5N7 158 aaKnown RBP8.79□□□□□ -1
AP1S3-208ENST00000446015 CDHR5Q9HBB8 845 aa8.79□□□□□ -1
AP1S3-208ENST00000446015 LMOD2Q6P5Q4 547 aa8.78□□□□□ -1
AP1S3-208ENST00000446015 SPNS2Q8IVW8 549 aa8.78□□□□□ -1
AP1S3-208ENST00000446015 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.77□□□□□ -1.01
AP1S3-208ENST00000446015 MYT1LQ9UL68 1186 aa8.77□□□□□ -1.01
AP1S3-208ENST00000446015 BHMG1C9JSJ3 638 aaPredicted RBP8.76□□□□□ -1.01
AP1S3-208ENST00000446015 GNPATO15228 680 aa8.76□□□□□ -1.01
AP1S3-208ENST00000446015 PROX2Q3B8N5 592 aa8.76□□□□□ -1.01
AP1S3-208ENST00000446015 NPDC1Q9NQX5 325 aaPredicted RBP8.76□□□□□ -1.01
AP1S3-208ENST00000446015 GOLGA8CPA6NN73 597 aa8.75□□□□□ -1.01
AP1S3-208ENST00000446015 TTC13Q8NBP0 860 aa8.75□□□□□ -1.01
AP1S3-208ENST00000446015 FAM98CQ17RN3 349 aaKnown RBP8.74□□□□□ -1.01
AP1S3-208ENST00000446015 PADI6Q6TGC4 694 aa8.74□□□□□ -1.01
AP1S3-208ENST00000446015 KIAA1468Q9P260 1216 aa8.74□□□□□ -1.01
AP1S3-208ENST00000446015 TSKSQ9UJT2 592 aa8.73□□□□□ -1.01
AP1S3-208ENST00000446015 RBM46Q8TBY0 533 aaKnown RBP8.72□□□□□ -1.01
AP1S3-208ENST00000446015 NECTIN2Q92692 538 aa8.72□□□□□ -1.01
AP1S3-208ENST00000446015 RNF166Q96A37 237 aaPredicted RBP8.72□□□□□ -1.01
AP1S3-208ENST00000446015 GPR37O15354 613 aa8.71□□□□□ -1.02
AP1S3-208ENST00000446015 OATP04181 439 aa8.71□□□□□ -1.02
AP1S3-208ENST00000446015 SLC4A3P48751 1232 aa8.71□□□□□ -1.02
AP1S3-208ENST00000446015 HDGFP51858 240 aaKnown RBP8.71□□□□□ -1.02
AP1S3-208ENST00000446015 TATDN2Q93075 761 aa8.71□□□□□ -1.02
AP1S3-208ENST00000446015 PNMA3Q9UL41 463 aa8.71□□□□□ -1.02
AP1S3-208ENST00000446015 MMRN1Q13201 1228 aa8.7□□□□□ -1.02
AP1S3-208ENST00000446015 ANKK1Q8NFD2 765 aa8.7□□□□□ -1.02
AP1S3-208ENST00000446015 MAP2K5Q13163 448 aa8.68□□□□□ -1.02
AP1S3-208ENST00000446015 NUDT18Q6ZVK8 323 aa8.68□□□□□ -1.02
AP1S3-208ENST00000446015 WNT2BQ93097 391 aa8.67□□□□□ -1.02
AP1S3-208ENST00000446015 ZFRQ96KR1 1074 aaKnown RBP8.67□□□□□ -1.02
AP1S3-208ENST00000446015 ADGRG1Q9Y653 693 aa8.67□□□□□ -1.02
AP1S3-208ENST00000446015 MINK1Q8N4C8 1332 aaPredicted RBP8.66□□□□□ -1.02
AP1S3-208ENST00000446015 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.66□□□□□ -1.02
AP1S3-208ENST00000446015 DNAJB2P25686 324 aa8.66□□□□□ -1.02
AP1S3-208ENST00000446015 NYAP1Q6ZVC0 841 aa8.66□□□□□ -1.02
AP1S3-208ENST00000446015 FAM198AQ9UFP1 575 aa8.66□□□□□ -1.02
AP1S3-208ENST00000446015 SEPT9Q9UHD8 586 aaPredicted RBP8.66□□□□□ -1.02
AP1S3-208ENST00000446015 LRCH3Q96II8 777 aa8.65□□□□□ -1.02
AP1S3-208ENST00000446015 ZC3H15Q8WU90 426 aaKnown RBP8.64□□□□□ -1.03
AP1S3-208ENST00000446015 HCSTQ9UBK5 93 aa8.64□□□□□ -1.03
AP1S3-208ENST00000446015 SLF2Q8IX21 1173 aa8.63□□□□□ -1.03
AP1S3-208ENST00000446015 KCTD12Q96CX2 325 aaKnown RBP8.63□□□□□ -1.03
AP1S3-208ENST00000446015 EYA1Q99502 592 aa8.63□□□□□ -1.03
AP1S3-208ENST00000446015 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.63□□□□□ -1.03
AP1S3-208ENST00000446015 SOWAHBA6NEL2 793 aa8.62□□□□□ -1.03
AP1S3-208ENST00000446015 ZMYND10O75800 440 aa8.62□□□□□ -1.03
AP1S3-208ENST00000446015 THSD4Q6ZMP0 1018 aa8.62□□□□□ -1.03
AP1S3-208ENST00000446015 BARGINQ6ZT62 677 aa8.62□□□□□ -1.03
AP1S3-208ENST00000446015 METTL3Q86U44 580 aaKnown RBP8.62□□□□□ -1.03
AP1S3-208ENST00000446015 PXYLP1Q8TE99 480 aa8.62□□□□□ -1.03
AP1S3-208ENST00000446015 IRF6O14896 467 aa8.6□□□□□ -1.03
AP1S3-208ENST00000446015 RSPH4AQ5TD94 716 aa8.6□□□□□ -1.03
AP1S3-208ENST00000446015 KRI1Q8N9T8 703 aaKnown RBP8.6□□□□□ -1.03
AP1S3-208ENST00000446015 PRR14Q9BWN1 585 aa8.6□□□□□ -1.03
AP1S3-208ENST00000446015 TMEM134Q9H6X4 195 aa8.6□□□□□ -1.03
AP1S3-208ENST00000446015 SMAPO00193 183 aa8.59□□□□□ -1.03
AP1S3-208ENST00000446015 TSR3Q9UJK0 312 aaKnown RBP8.59□□□□□ -1.03
AP1S3-208ENST00000446015 RCCD1A6NED2 376 aa8.58□□□□□ -1.04
AP1S3-208ENST00000446015 FECHP22830 423 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms