RNA–Protein interactions for RNA: ENST00000445855.1

R3HDM1-211, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-211ENST00000445855 NPDC1Q9NQX5 325 aaPredicted RBP8.3□□□□□ -1.08
R3HDM1-211ENST00000445855 TIMELESSQ9UNS1 1208 aa8.3□□□□□ -1.08
R3HDM1-211ENST00000445855 POTEB2H3BUK9 544 aa8.29□□□□□ -1.08
R3HDM1-211ENST00000445855 TSR1Q2NL82 804 aaKnown RBP8.28□□□□□ -1.08
R3HDM1-211ENST00000445855 PARP9Q8IXQ6 854 aa8.28□□□□□ -1.08
R3HDM1-211ENST00000445855 CERKQ8TCT0 537 aa8.28□□□□□ -1.08
R3HDM1-211ENST00000445855 NUDT7P0C024 238 aa8.27□□□□□ -1.09
R3HDM1-211ENST00000445855 IL27Q8NEV9 243 aa8.27□□□□□ -1.09
R3HDM1-211ENST00000445855 ZDHHC16Q969W1 377 aa8.27□□□□□ -1.09
R3HDM1-211ENST00000445855 ARSIQ5FYB1 569 aa8.26□□□□□ -1.09
R3HDM1-211ENST00000445855 GPR153Q6NV75 609 aa8.26□□□□□ -1.09
R3HDM1-211ENST00000445855 ZNF454Q8N9F8 522 aa8.26□□□□□ -1.09
R3HDM1-211ENST00000445855 DDRGK1Q96HY6 314 aa8.26□□□□□ -1.09
R3HDM1-211ENST00000445855 TTLL12Q14166 644 aaPredicted RBP8.25□□□□□ -1.09
R3HDM1-211ENST00000445855 C6orf132Q5T0Z8 1188 aa8.25□□□□□ -1.09
R3HDM1-211ENST00000445855 ZNF710Q8N1W2 664 aa8.25□□□□□ -1.09
R3HDM1-211ENST00000445855 RBM27Q9P2N5 1060 aaKnown RBP8.24□□□□□ -1.09
R3HDM1-211ENST00000445855 KHSRPQ92945 711 aaKnown RBP eCLIP8.23□□□□□ -1.09
R3HDM1-211ENST00000445855 FAM117AQ9C073 453 aa8.23□□□□□ -1.09
R3HDM1-211ENST00000445855 PSDA5PKW4 1024 aaPredicted RBP8.22□□□□□ -1.09
R3HDM1-211ENST00000445855 SNPHO15079 494 aa8.22□□□□□ -1.09
R3HDM1-211ENST00000445855 C14orf37Q86TY3 774 aa8.22□□□□□ -1.09
R3HDM1-211ENST00000445855 GIGYF2Q6Y7W6 1299 aaKnown RBP8.21□□□□□ -1.1
R3HDM1-211ENST00000445855 ADAM33Q9BZ11 813 aa8.21□□□□□ -1.1
R3HDM1-211ENST00000445855 OATP04181 439 aa8.2□□□□□ -1.1
R3HDM1-211ENST00000445855 CLCN1P35523 988 aa8.2□□□□□ -1.1
R3HDM1-211ENST00000445855 PPP4R3BQ5MIZ7 849 aa8.2□□□□□ -1.1
R3HDM1-211ENST00000445855 PADI6Q6TGC4 694 aa8.2□□□□□ -1.1
R3HDM1-211ENST00000445855 LHX6Q9UPM6 363 aa8.2□□□□□ -1.1
R3HDM1-211ENST00000445855 PLEKHG3A1L390 1219 aa8.19□□□□□ -1.1
R3HDM1-211ENST00000445855 TTC13Q8NBP0 860 aa8.19□□□□□ -1.1
R3HDM1-211ENST00000445855 METTL3Q86U44 580 aaKnown RBP8.18□□□□□ -1.1
R3HDM1-211ENST00000445855 TMUB1Q9BVT8 246 aa8.18□□□□□ -1.1
R3HDM1-211ENST00000445855 GPCPD1Q9NPB8 672 aa8.18□□□□□ -1.1
R3HDM1-211ENST00000445855 PLSCR2Q9NRY7 297 aa8.18□□□□□ -1.1
R3HDM1-211ENST00000445855 HOXB1P14653 301 aaPredicted RBP8.17□□□□□ -1.1
R3HDM1-211ENST00000445855 PRSS12P56730 875 aa8.17□□□□□ -1.1
R3HDM1-211ENST00000445855 MDM2Q00987 491 aaPredicted RBP8.17□□□□□ -1.1
R3HDM1-211ENST00000445855 BCL2L12Q9HB09 334 aa8.17□□□□□ -1.1
R3HDM1-211ENST00000445855 ADGRG1Q9Y653 693 aa8.17□□□□□ -1.1
R3HDM1-211ENST00000445855 MS4A1P11836 297 aa8.16□□□□□ -1.1
R3HDM1-211ENST00000445855 PXYLP1Q8TE99 480 aa8.16□□□□□ -1.1
R3HDM1-211ENST00000445855 PHOX2BQ99453 314 aa8.16□□□□□ -1.1
R3HDM1-211ENST00000445855 REPIN1Q9BWE0 567 aaKnown RBP8.16□□□□□ -1.1
R3HDM1-211ENST00000445855 GOPCQ9HD26 462 aa8.16□□□□□ -1.1
R3HDM1-211ENST00000445855 CDCA7LQ96GN5 454 aa8.15□□□□□ -1.1
R3HDM1-211ENST00000445855 PPP1R3GB7ZBB8 358 aa8.14□□□□□ -1.11
R3HDM1-211ENST00000445855 PTPREP23469 700 aa8.14□□□□□ -1.11
R3HDM1-211ENST00000445855 FAM161AQ3B820 660 aa8.14□□□□□ -1.11
R3HDM1-211ENST00000445855 RBM46Q8TBY0 533 aaKnown RBP8.14□□□□□ -1.11
R3HDM1-211ENST00000445855 SSTR3P32745 418 aaPredicted RBP8.12□□□□□ -1.11
R3HDM1-211ENST00000445855 FAM217BQ9NTX9 383 aaPredicted RBP8.12□□□□□ -1.11
R3HDM1-211ENST00000445855 COL9A1P20849 921 aa8.11□□□□□ -1.11
R3HDM1-211ENST00000445855 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.1□□□□□ -1.11
R3HDM1-211ENST00000445855 SH3D19Q5HYK7 790 aa8.1□□□□□ -1.11
R3HDM1-211ENST00000445855 OTUD5Q96G74 571 aa8.09□□□□□ -1.11
R3HDM1-211ENST00000445855 PCMTD1Q96MG8 357 aaPredicted RBP8.09□□□□□ -1.11
R3HDM1-211ENST00000445855 RSPH6AQ9H0K4 717 aa8.09□□□□□ -1.11
R3HDM1-211ENST00000445855 FAM198AQ9UFP1 575 aa8.09□□□□□ -1.11
R3HDM1-211ENST00000445855 NBPF26B4DH59 902 aa8.08□□□□□ -1.12
R3HDM1-211ENST00000445855 NLRP7Q8WX94 980 aa8.08□□□□□ -1.12
R3HDM1-211ENST00000445855 KCNH8Q96L42 1107 aa8.08□□□□□ -1.12
R3HDM1-211ENST00000445855 BEGAINQ9BUH8 593 aa8.08□□□□□ -1.12
R3HDM1-211ENST00000445855 TSKSQ9UJT2 592 aa8.08□□□□□ -1.12
R3HDM1-211ENST00000445855 TRIM6-TRIM34B2RNG4 842 aa8.07□□□□□ -1.12
R3HDM1-211ENST00000445855 EYA1Q99502 592 aa8.07□□□□□ -1.12
R3HDM1-211ENST00000445855 RCCD1A6NED2 376 aa8.06□□□□□ -1.12
R3HDM1-211ENST00000445855 ONECUT3O60422 494 aaPredicted RBP8.06□□□□□ -1.12
R3HDM1-211ENST00000445855 PACS2Q86VP3 889 aa8.06□□□□□ -1.12
R3HDM1-211ENST00000445855 SKIV2LQ15477 1246 aaKnown RBP8.05□□□□□ -1.12
R3HDM1-211ENST00000445855 NUDT18Q6ZVK8 323 aa8.05□□□□□ -1.12
R3HDM1-211ENST00000445855 KCNK17Q96T54 332 aa8.05□□□□□ -1.12
R3HDM1-211ENST00000445855 DNAJB2P25686 324 aa8.04□□□□□ -1.12
R3HDM1-211ENST00000445855 DIXDC1Q155Q3 683 aa8.04□□□□□ -1.12
R3HDM1-211ENST00000445855 TATDN2Q93075 761 aa8.04□□□□□ -1.12
R3HDM1-211ENST00000445855 PNMA3Q9UL41 463 aa8.04□□□□□ -1.12
R3HDM1-211ENST00000445855 FLIIQ13045 1269 aa8.03□□□□□ -1.12
R3HDM1-211ENST00000445855 SULF1Q8IWU6 871 aa8.03□□□□□ -1.12
R3HDM1-211ENST00000445855 LHX8Q68G74 356 aa8.02□□□□□ -1.13
R3HDM1-211ENST00000445855 TMEM134Q9H6X4 195 aa8.02□□□□□ -1.13
R3HDM1-211ENST00000445855 C3orf80F5H4A9 247 aa8.01□□□□□ -1.13
R3HDM1-211ENST00000445855 PROX2Q3B8N5 592 aa8.01□□□□□ -1.13
R3HDM1-211ENST00000445855 MYSM1Q5VVJ2 828 aa8.01□□□□□ -1.13
R3HDM1-211ENST00000445855 ZBED2Q9BTP6 218 aa8.01□□□□□ -1.13
R3HDM1-211ENST00000445855 CD46P15529 392 aa8□□□□□ -1.13
R3HDM1-211ENST00000445855 ZMYND15Q9H091 742 aa8□□□□□ -1.13
R3HDM1-211ENST00000445855 ERBB3P21860 1342 aa8□□□□□ -1.13
R3HDM1-211ENST00000445855 ARHGAP33O14559 1287 aa7.99□□□□□ -1.13
R3HDM1-211ENST00000445855 VARS2Q5ST30 1063 aaKnown RBP7.99□□□□□ -1.13
R3HDM1-211ENST00000445855 SLC4A5Q9BY07 1137 aa7.99□□□□□ -1.13
R3HDM1-211ENST00000445855 TBC1D2Q9BYX2 928 aa7.99□□□□□ -1.13
R3HDM1-211ENST00000445855 PBX2P40425 430 aa7.98□□□□□ -1.13
R3HDM1-211ENST00000445855 CLK2P49760 499 aaKnown RBP7.98□□□□□ -1.13
R3HDM1-211ENST00000445855 POLR3EQ9NVU0 708 aa7.98□□□□□ -1.13
R3HDM1-211ENST00000445855 KIAA1468Q9P260 1216 aa7.98□□□□□ -1.13
R3HDM1-211ENST00000445855 DDX11L8A8MPP1 907 aa7.97□□□□□ -1.13
R3HDM1-211ENST00000445855 SMAPO00193 183 aa7.97□□□□□ -1.13
R3HDM1-211ENST00000445855 PSEN2P49810 448 aa7.97□□□□□ -1.13
R3HDM1-211ENST00000445855 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.97□□□□□ -1.13
R3HDM1-211ENST00000445855 RABGEF1Q9UJ41 708 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms