RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CENPJQ9HC77 1338 aaPredicted RBP21.25■□□□□ 0.99
TCOF1-206ENST00000445265 CASC1Q6TDU7 716 aa21.25■□□□□ 0.99
TCOF1-206ENST00000445265 PLIN1O60240 522 aa21.24■□□□□ 0.99
TCOF1-206ENST00000445265 GLIPR1L2Q4G1C9 344 aa21.24■□□□□ 0.99
TCOF1-206ENST00000445265 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
TCOF1-206ENST00000445265 STAC3Q96MF2 364 aa21.24■□□□□ 0.99
TCOF1-206ENST00000445265 IPO8O15397 1037 aaKnown RBP21.23■□□□□ 0.99
TCOF1-206ENST00000445265 RTN4Q9NQC3 1192 aaKnown RBP21.23■□□□□ 0.99
TCOF1-206ENST00000445265 CRBNQ96SW2 442 aa21.23■□□□□ 0.99
TCOF1-206ENST00000445265 PTPN23Q9H3S7 1636 aa21.22■□□□□ 0.99
TCOF1-206ENST00000445265 SAFB2Q14151 953 aaKnown RBP eCLIP21.22■□□□□ 0.99
TCOF1-206ENST00000445265 MRC2Q9UBG0 1479 aa21.22■□□□□ 0.99
TCOF1-206ENST00000445265 HSCBQ8IWL3 235 aa21.21■□□□□ 0.99
TCOF1-206ENST00000445265 NGEFQ8N5V2 710 aa21.21■□□□□ 0.99
TCOF1-206ENST00000445265 IFT140Q96RY7 1462 aa21.21■□□□□ 0.99
TCOF1-206ENST00000445265 E9PSI1 815 aa21.2■□□□□ 0.98
TCOF1-206ENST00000445265 CCDC184Q52MB2 194 aa21.2■□□□□ 0.98
TCOF1-206ENST00000445265 HDGFL2Q7Z4V5 671 aaPredicted RBP21.2■□□□□ 0.98
TCOF1-206ENST00000445265 PRG4Q92954 1404 aaPredicted RBP21.19■□□□□ 0.98
TCOF1-206ENST00000445265 HSP90AB1P08238 724 aaKnown RBP21.19■□□□□ 0.98
TCOF1-206ENST00000445265 WASHC2CQ9Y4E1 1318 aa21.19■□□□□ 0.98
TCOF1-206ENST00000445265 FAM161AQ3B820 660 aa21.18■□□□□ 0.98
TCOF1-206ENST00000445265 PLPPR3Q6T4P5 718 aa21.18■□□□□ 0.98
TCOF1-206ENST00000445265 CDK13Q14004 1512 aaKnown RBP21.18■□□□□ 0.98
TCOF1-206ENST00000445265 ANKRD30BQ9BXX2 1392 aa21.18■□□□□ 0.98
TCOF1-206ENST00000445265 L1TD1Q5T7N2 865 aaKnown RBP21.17■□□□□ 0.98
TCOF1-206ENST00000445265 PNISRQ8TF01 805 aaKnown RBP21.17■□□□□ 0.98
TCOF1-206ENST00000445265 LAMC3Q9Y6N6 1575 aa21.17■□□□□ 0.98
TCOF1-206ENST00000445265 C9orf84Q5VXU9 1444 aa21.17■□□□□ 0.98
TCOF1-206ENST00000445265 IQGAP2Q13576 1575 aa21.17■□□□□ 0.98
TCOF1-206ENST00000445265 SMG6Q86US8 1419 aaKnown RBP21.17■□□□□ 0.98
TCOF1-206ENST00000445265 STK26Q9P289 416 aa21.16■□□□□ 0.98
TCOF1-206ENST00000445265 KIAA0586Q9BVV6 1533 aa21.15■□□□□ 0.98
TCOF1-206ENST00000445265 CGNL1Q0VF96 1302 aa21.15■□□□□ 0.98
TCOF1-206ENST00000445265 HAP1P54257 671 aaPredicted RBP21.15■□□□□ 0.98
TCOF1-206ENST00000445265 NCLP19338 710 aaKnown RBP21.14■□□□□ 0.97
TCOF1-206ENST00000445265 CALD1Q05682 793 aaKnown RBP21.13■□□□□ 0.97
TCOF1-206ENST00000445265 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
TCOF1-206ENST00000445265 APAF1O14727 1248 aa21.13■□□□□ 0.97
TCOF1-206ENST00000445265 CFAP44Q96MT7 982 aa21.12■□□□□ 0.97
TCOF1-206ENST00000445265 ITPRIPQ8IWB1 547 aa21.12■□□□□ 0.97
TCOF1-206ENST00000445265 TERF2IPQ9NYB0 399 aa21.12■□□□□ 0.97
TCOF1-206ENST00000445265 TRAK1Q9UPV9 953 aa21.12■□□□□ 0.97
TCOF1-206ENST00000445265 SMC4Q9NTJ3 1288 aa21.11■□□□□ 0.97
TCOF1-206ENST00000445265 AKNAQ7Z591 1439 aa21.11■□□□□ 0.97
TCOF1-206ENST00000445265 SLKQ9H2G2 1235 aaPredicted RBP21.1■□□□□ 0.97
TCOF1-206ENST00000445265 CLUAP1Q96AJ1 413 aa21.09■□□□□ 0.97
TCOF1-206ENST00000445265 NCOA1Q15788 1441 aa21.09■□□□□ 0.97
TCOF1-206ENST00000445265 C11orf95C9JLR9 678 aaPredicted RBP21.09■□□□□ 0.97
TCOF1-206ENST00000445265 ABCC5O15440 1437 aa21.09■□□□□ 0.97
TCOF1-206ENST00000445265 HDGFP51858 240 aaKnown RBP21.08■□□□□ 0.97
TCOF1-206ENST00000445265 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
TCOF1-206ENST00000445265 RPRD2Q5VT52 1461 aaKnown RBP21.06■□□□□ 0.96
TCOF1-206ENST00000445265 THOC2Q8NI27 1593 aaKnown RBP21.06■□□□□ 0.96
TCOF1-206ENST00000445265 SPRYD3Q8NCJ5 442 aa21.06■□□□□ 0.96
TCOF1-206ENST00000445265 NBPF1Q3BBV0 1214 aa21.05■□□□□ 0.96
TCOF1-206ENST00000445265 C14orf37Q86TY3 774 aa21.05■□□□□ 0.96
TCOF1-206ENST00000445265 ADAMTS8Q9UP79 889 aa21.04■□□□□ 0.96
TCOF1-206ENST00000445265 RRP7AQ9Y3A4 280 aaKnown RBP21.04■□□□□ 0.96
TCOF1-206ENST00000445265 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
TCOF1-206ENST00000445265 ARHGAP5Q13017 1502 aa21.03■□□□□ 0.96
TCOF1-206ENST00000445265 CDCA7LQ96GN5 454 aa21.03■□□□□ 0.96
TCOF1-206ENST00000445265 PTPRKQ15262 1439 aa21.03■□□□□ 0.96
TCOF1-206ENST00000445265 EVC2Q86UK5 1308 aa21.01■□□□□ 0.95
TCOF1-206ENST00000445265 VGFO15240 615 aaPredicted RBP21.01■□□□□ 0.95
TCOF1-206ENST00000445265 COG6Q9Y2V7 657 aa21.01■□□□□ 0.95
TCOF1-206ENST00000445265 CAMSAP2Q08AD1 1489 aa21■□□□□ 0.95
TCOF1-206ENST00000445265 MFAP1P55081 439 aaKnown RBP21■□□□□ 0.95
TCOF1-206ENST00000445265 PLEKHH2Q8IVE3 1493 aa20.99■□□□□ 0.95
TCOF1-206ENST00000445265 GBP4Q96PP9 640 aa20.99■□□□□ 0.95
TCOF1-206ENST00000445265 ZKSCAN2Q63HK3 967 aa20.99■□□□□ 0.95
TCOF1-206ENST00000445265 PPP2R1AP30153 589 aa20.98■□□□□ 0.95
TCOF1-206ENST00000445265 CFAP43Q8NDM7 1665 aa20.98■□□□□ 0.95
TCOF1-206ENST00000445265 PTMSP20962 102 aa20.98■□□□□ 0.95
TCOF1-206ENST00000445265 SLC4A3P48751 1232 aa20.98■□□□□ 0.95
TCOF1-206ENST00000445265 UGGT2Q9NYU1 1516 aa20.97■□□□□ 0.95
TCOF1-206ENST00000445265 NAP1L5Q96NT1 182 aaPredicted RBP20.97■□□□□ 0.95
TCOF1-206ENST00000445265 GSE1Q14687 1217 aa20.97■□□□□ 0.95
TCOF1-206ENST00000445265 BCL2L13Q9BXK5 485 aa20.96■□□□□ 0.95
TCOF1-206ENST00000445265 NUTM2DQ5VT03 806 aaPredicted RBP20.96■□□□□ 0.95
TCOF1-206ENST00000445265 RUNDC1Q96C34 613 aa20.96■□□□□ 0.95
TCOF1-206ENST00000445265 ZBTB7CA1YPR0 619 aa20.95■□□□□ 0.95
TCOF1-206ENST00000445265 AAMPQ13685 434 aa20.95■□□□□ 0.95
TCOF1-206ENST00000445265 PTMAP06454 111 aaKnown RBP20.93■□□□□ 0.94
TCOF1-206ENST00000445265 ERBINQ96RT1 1412 aa20.93■□□□□ 0.94
TCOF1-206ENST00000445265 LMOD3Q0VAK6 560 aa20.93■□□□□ 0.94
TCOF1-206ENST00000445265 MLECQ14165 292 aa20.93■□□□□ 0.94
TCOF1-206ENST00000445265 RTF1Q92541 710 aaKnown RBP20.92■□□□□ 0.94
TCOF1-206ENST00000445265 MCCP23508 829 aa20.91■□□□□ 0.94
TCOF1-206ENST00000445265 MAGI1Q96QZ7 1491 aaPredicted RBP20.9■□□□□ 0.94
TCOF1-206ENST00000445265 AFAP1Q8N556 730 aa20.9■□□□□ 0.94
TCOF1-206ENST00000445265 BACH2Q9BYV9 841 aa20.9■□□□□ 0.94
TCOF1-206ENST00000445265 GOLGA6L3A6NEY3 463 aa20.89■□□□□ 0.93
TCOF1-206ENST00000445265 GZF1Q9H116 711 aaPredicted RBP20.89■□□□□ 0.93
TCOF1-206ENST00000445265 CTTNBP2Q8WZ74 1663 aa20.89■□□□□ 0.93
TCOF1-206ENST00000445265 PLB1Q6P1J6 1458 aa20.89■□□□□ 0.93
TCOF1-206ENST00000445265 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
TCOF1-206ENST00000445265 CCDC141Q6ZP82 1450 aa20.88■□□□□ 0.93
TCOF1-206ENST00000445265 DDX19BQ9UMR2 479 aa20.88■□□□□ 0.93
TCOF1-206ENST00000445265 PAK3O75914 559 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms