RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 BCL11BQ9C0K0 894 aaPredicted RBP6.41□□□□□ -1.38
SCN11A-202ENST00000444237 GRPEL1Q9HAV7 217 aa6.41□□□□□ -1.38
SCN11A-202ENST00000444237 TRAK2O60296 914 aa6.41□□□□□ -1.38
SCN11A-202ENST00000444237 PMFBP1Q8TBY8 1022 aa6.41□□□□□ -1.38
SCN11A-202ENST00000444237 ZSCAN30Q86W11 494 aa6.41□□□□□ -1.38
SCN11A-202ENST00000444237 EXOC6Q8TAG9 804 aa6.41□□□□□ -1.38
SCN11A-202ENST00000444237 GAPVD1Q14C86 1478 aa6.4□□□□□ -1.38
SCN11A-202ENST00000444237 SETD5Q9C0A6 1442 aa6.4□□□□□ -1.38
SCN11A-202ENST00000444237 PPP1R15AO75807 674 aaPredicted RBP6.4□□□□□ -1.38
SCN11A-202ENST00000444237 DNAJC2Q99543 621 aaKnown RBP6.4□□□□□ -1.38
SCN11A-202ENST00000444237 HSPA5P11021 654 aaKnown RBP6.4□□□□□ -1.38
SCN11A-202ENST00000444237 KIF3AQ9Y496 699 aa6.4□□□□□ -1.38
SCN11A-202ENST00000444237 GTPBP4Q9BZE4 634 aaKnown RBP6.4□□□□□ -1.39
SCN11A-202ENST00000444237 IFT140Q96RY7 1462 aa6.4□□□□□ -1.39
SCN11A-202ENST00000444237 SENP3-EIF4A1A0A087X0R7 540 aa6.4□□□□□ -1.39
SCN11A-202ENST00000444237 RWDD1Q9H446 243 aaPredicted RBP6.4□□□□□ -1.39
SCN11A-202ENST00000444237 CALCOCO1Q9P1Z2 691 aa6.39□□□□□ -1.39
SCN11A-202ENST00000444237 VPS8Q8N3P4 1428 aa6.39□□□□□ -1.39
SCN11A-202ENST00000444237 PATL2C9JE40 543 aaKnown RBP6.39□□□□□ -1.39
SCN11A-202ENST00000444237 PRDM10Q9NQV6 1147 aa6.39□□□□□ -1.39
SCN11A-202ENST00000444237 PDCL2Q8N4E4 241 aa6.39□□□□□ -1.39
SCN11A-202ENST00000444237 DYNC1I1O14576 645 aa6.39□□□□□ -1.39
SCN11A-202ENST00000444237 CGNQ9P2M7 1197 aaKnown RBP6.39□□□□□ -1.39
SCN11A-202ENST00000444237 KIF16BQ96L93 1317 aa6.38□□□□□ -1.39
SCN11A-202ENST00000444237 MFAP1P55081 439 aaKnown RBP6.38□□□□□ -1.39
SCN11A-202ENST00000444237 AAMPQ13685 434 aa6.38□□□□□ -1.39
SCN11A-202ENST00000444237 PAXIP1Q6ZW49 1069 aaPredicted RBP6.38□□□□□ -1.39
SCN11A-202ENST00000444237 STAG3Q9UJ98 1225 aa6.38□□□□□ -1.39
SCN11A-202ENST00000444237 TOPBP1Q92547 1522 aa6.38□□□□□ -1.39
SCN11A-202ENST00000444237 GOLGA6L4A6NEF3 574 aa6.38□□□□□ -1.39
SCN11A-202ENST00000444237 TPM3P06753 285 aa6.38□□□□□ -1.39
SCN11A-202ENST00000444237 SASS6Q6UVJ0 657 aa6.38□□□□□ -1.39
SCN11A-202ENST00000444237 RALBP1Q15311 655 aa6.38□□□□□ -1.39
SCN11A-202ENST00000444237 AEBP1Q8IUX7 1158 aa6.38□□□□□ -1.39
SCN11A-202ENST00000444237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.37□□□□□ -1.39
SCN11A-202ENST00000444237 CC2D1BQ5T0F9 858 aaKnown RBP6.37□□□□□ -1.39
SCN11A-202ENST00000444237 ARGLU1Q9NWB6 273 aaPredicted RBP6.37□□□□□ -1.39
SCN11A-202ENST00000444237 PHLDB1Q86UU1 1377 aa6.37□□□□□ -1.39
SCN11A-202ENST00000444237 KIF20AO95235 890 aa6.37□□□□□ -1.39
SCN11A-202ENST00000444237 HOMEZQ8IX15 550 aa6.37□□□□□ -1.39
SCN11A-202ENST00000444237 DNMBPQ6XZF7 1577 aa6.37□□□□□ -1.39
SCN11A-202ENST00000444237 TPRNQ4KMQ1 711 aa6.37□□□□□ -1.39
SCN11A-202ENST00000444237 DEF6Q9H4E7 631 aa6.37□□□□□ -1.39
SCN11A-202ENST00000444237 CHIC2Q9UKJ5 165 aa6.37□□□□□ -1.39
SCN11A-202ENST00000444237 RAPGEF2Q9Y4G8 1499 aa6.36□□□□□ -1.39
SCN11A-202ENST00000444237 CHGAP10645 457 aaKnown RBP6.36□□□□□ -1.39
SCN11A-202ENST00000444237 MCCP23508 829 aa6.36□□□□□ -1.39
SCN11A-202ENST00000444237 RAB3GAP2Q9H2M9 1393 aa6.36□□□□□ -1.39
SCN11A-202ENST00000444237 PRKRIP1Q9H875 184 aaPredicted RBP6.36□□□□□ -1.39
SCN11A-202ENST00000444237 ZNF526Q8TF50 670 aaPredicted RBP6.36□□□□□ -1.39
SCN11A-202ENST00000444237 IPO4Q8TEX9 1081 aaKnown RBP6.35□□□□□ -1.39
SCN11A-202ENST00000444237 GRIN2BQ13224 1484 aa6.35□□□□□ -1.39
SCN11A-202ENST00000444237 JPH4Q96JJ6 628 aa6.35□□□□□ -1.39
SCN11A-202ENST00000444237 POGKQ9P215 609 aa6.35□□□□□ -1.39
SCN11A-202ENST00000444237 PEG3Q9GZU2 1588 aa6.35□□□□□ -1.39
SCN11A-202ENST00000444237 SNAPC4Q5SXM2 1469 aa6.35□□□□□ -1.39
SCN11A-202ENST00000444237 BRD2P25440 801 aaKnown RBP6.35□□□□□ -1.39
SCN11A-202ENST00000444237 TIGD1Q96MW7 591 aa6.35□□□□□ -1.39
SCN11A-202ENST00000444237 USP8P40818 1118 aa6.34□□□□□ -1.39
SCN11A-202ENST00000444237 CBX1P83916 185 aa6.34□□□□□ -1.39
SCN11A-202ENST00000444237 AXDND1Q5T1B0 1012 aaPredicted RBP6.34□□□□□ -1.39
SCN11A-202ENST00000444237 CRBNQ96SW2 442 aa6.34□□□□□ -1.39
SCN11A-202ENST00000444237 MCM4P33991 863 aa6.34□□□□□ -1.39
SCN11A-202ENST00000444237 MAPK8IP2Q13387 824 aaPredicted RBP6.34□□□□□ -1.39
SCN11A-202ENST00000444237 TSPY4P0CV99 314 aa6.34□□□□□ -1.39
SCN11A-202ENST00000444237 TSPY10P0CW01 314 aa6.34□□□□□ -1.39
SCN11A-202ENST00000444237 CUX1P39880 1505 aa6.34□□□□□ -1.4
SCN11A-202ENST00000444237 MCM5P33992 734 aa6.34□□□□□ -1.4
SCN11A-202ENST00000444237 NBPF1Q3BBV0 1214 aa6.34□□□□□ -1.4
SCN11A-202ENST00000444237 CCDC94Q9BW85 323 aaPredicted RBP6.33□□□□□ -1.4
SCN11A-202ENST00000444237 ROCK2O75116 1388 aaKnown RBP6.33□□□□□ -1.4
SCN11A-202ENST00000444237 POLA1P09884 1462 aaPredicted RBP6.33□□□□□ -1.4
SCN11A-202ENST00000444237 KIF21AQ7Z4S6 1674 aa6.33□□□□□ -1.4
SCN11A-202ENST00000444237 CLGNO14967 610 aa6.33□□□□□ -1.4
SCN11A-202ENST00000444237 NUCB2P80303 420 aa6.33□□□□□ -1.4
SCN11A-202ENST00000444237 KNSTRNQ9Y448 316 aa6.33□□□□□ -1.4
SCN11A-202ENST00000444237 RDXP35241 583 aaKnown RBP6.33□□□□□ -1.4
SCN11A-202ENST00000444237 KCNJ4P48050 445 aa6.33□□□□□ -1.4
SCN11A-202ENST00000444237 AK7Q96M32 723 aa6.33□□□□□ -1.4
SCN11A-202ENST00000444237 SMG6Q86US8 1419 aaKnown RBP6.33□□□□□ -1.4
SCN11A-202ENST00000444237 SYNJ1O43426 1573 aa6.33□□□□□ -1.4
SCN11A-202ENST00000444237 ST18O60284 1047 aa6.32□□□□□ -1.4
SCN11A-202ENST00000444237 CDCA8Q53HL2 280 aa6.32□□□□□ -1.4
SCN11A-202ENST00000444237 LEKR1Q6ZMV7 388 aa6.32□□□□□ -1.4
SCN11A-202ENST00000444237 PLCD3Q8N3E9 789 aa6.32□□□□□ -1.4
SCN11A-202ENST00000444237 CFDP1Q9UEE9 299 aaPredicted RBP6.32□□□□□ -1.4
SCN11A-202ENST00000444237 CGNL1Q0VF96 1302 aa6.32□□□□□ -1.4
SCN11A-202ENST00000444237 TERF1P54274 439 aa6.32□□□□□ -1.4
SCN11A-202ENST00000444237 TPM4P67936 248 aa6.32□□□□□ -1.4
SCN11A-202ENST00000444237 PPP4R3BQ5MIZ7 849 aa6.32□□□□□ -1.4
SCN11A-202ENST00000444237 CARD11Q9BXL7 1154 aa6.32□□□□□ -1.4
SCN11A-202ENST00000444237 MLECQ14165 292 aa6.32□□□□□ -1.4
SCN11A-202ENST00000444237 CTR9Q6PD62 1173 aa6.32□□□□□ -1.4
SCN11A-202ENST00000444237 CENPJQ9HC77 1338 aaPredicted RBP6.32□□□□□ -1.4
SCN11A-202ENST00000444237 EIF3AQ14152 1382 aaKnown RBP6.32□□□□□ -1.4
SCN11A-202ENST00000444237 ZNF592Q92610 1267 aa6.31□□□□□ -1.4
SCN11A-202ENST00000444237 ACBD3Q9H3P7 528 aa6.31□□□□□ -1.4
SCN11A-202ENST00000444237 SENP3Q9H4L4 574 aaPredicted RBP6.31□□□□□ -1.4
SCN11A-202ENST00000444237 URB2Q14146 1524 aaKnown RBP6.31□□□□□ -1.4
SCN11A-202ENST00000444237 E9PSI1 815 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms