RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 FCHSD2O94868 740 aa9.05□□□□□ -0.96
TM9SF3-202ENST00000443638 TTLL12Q14166 644 aaPredicted RBP9.05□□□□□ -0.96
TM9SF3-202ENST00000443638 TMUB1Q9BVT8 246 aa9.04□□□□□ -0.96
TM9SF3-202ENST00000443638 TMEM106CQ9BVX2 250 aa9.04□□□□□ -0.96
TM9SF3-202ENST00000443638 REPIN1Q9BWE0 567 aaKnown RBP9.04□□□□□ -0.96
TM9SF3-202ENST00000443638 SERPINA10Q9UK55 444 aa9.04□□□□□ -0.96
TM9SF3-202ENST00000443638 ZNF777Q9ULD5 760 aaPredicted RBP9.04□□□□□ -0.96
TM9SF3-202ENST00000443638 GRXCR2A6NFK2 248 aa9.03□□□□□ -0.96
TM9SF3-202ENST00000443638 GOLGA2Q08379 1002 aa9.03□□□□□ -0.96
TM9SF3-202ENST00000443638 POM121Q96HA1 1249 aa9.02□□□□□ -0.97
TM9SF3-202ENST00000443638 PTGER2P43116 358 aa9.01□□□□□ -0.97
TM9SF3-202ENST00000443638 RGS22Q8NE09 1264 aa9.01□□□□□ -0.97
TM9SF3-202ENST00000443638 PRIM1P49642 420 aaKnown RBP8.99□□□□□ -0.97
TM9SF3-202ENST00000443638 PTGDRQ13258 359 aa8.99□□□□□ -0.97
TM9SF3-202ENST00000443638 CCDC97Q96F63 343 aaPredicted RBP8.99□□□□□ -0.97
TM9SF3-202ENST00000443638 SKIV2LQ15477 1246 aaKnown RBP8.98□□□□□ -0.97
TM9SF3-202ENST00000443638 PLPP6Q8IY26 295 aa8.98□□□□□ -0.97
TM9SF3-202ENST00000443638 KIF3CO14782 793 aa8.96□□□□□ -0.98
TM9SF3-202ENST00000443638 RAD21O60216 631 aa8.96□□□□□ -0.98
TM9SF3-202ENST00000443638 PLCG2P16885 1265 aa8.96□□□□□ -0.98
TM9SF3-202ENST00000443638 MICALL2Q8IY33 904 aa8.96□□□□□ -0.98
TM9SF3-202ENST00000443638 TMC2Q8TDI7 906 aa8.96□□□□□ -0.98
TM9SF3-202ENST00000443638 RETREG2Q8NC44 543 aa8.95□□□□□ -0.98
TM9SF3-202ENST00000443638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.95□□□□□ -0.985e-7■■□□□ 11.4
TM9SF3-202ENST00000443638 COG6Q9Y2V7 657 aa8.95□□□□□ -0.98
TM9SF3-202ENST00000443638 MAP3K9P80192 1104 aa8.94□□□□□ -0.98
TM9SF3-202ENST00000443638 SPDYE5A6NIY4 337 aa8.93□□□□□ -0.98
TM9SF3-202ENST00000443638 CLCN1P35523 988 aa8.93□□□□□ -0.98
TM9SF3-202ENST00000443638 IRX5P78411 483 aaPredicted RBP8.93□□□□□ -0.98
TM9SF3-202ENST00000443638 IRF5Q13568 498 aa8.93□□□□□ -0.98
TM9SF3-202ENST00000443638 AEBP1Q8IUX7 1158 aa8.93□□□□□ -0.98
TM9SF3-202ENST00000443638 PROCA1Q8NCQ7 364 aaPredicted RBP8.93□□□□□ -0.98
TM9SF3-202ENST00000443638 SLAIN1Q8ND83 568 aa8.93□□□□□ -0.98
TM9SF3-202ENST00000443638 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.93□□□□□ -0.98
TM9SF3-202ENST00000443638 DPY19L2Q6NUT2 758 aa8.92□□□□□ -0.98
TM9SF3-202ENST00000443638 DDX12PQ92771 950 aa8.91□□□□□ -0.98
TM9SF3-202ENST00000443638 TMEM121BQ9BXQ6 578 aaPredicted RBP8.91□□□□□ -0.98
TM9SF3-202ENST00000443638 GPCPD1Q9NPB8 672 aa8.91□□□□□ -0.98
TM9SF3-202ENST00000443638 C2orf72A6NCS6 295 aa8.9□□□□□ -0.98
TM9SF3-202ENST00000443638 TMCO4Q5TGY1 634 aa8.9□□□□□ -0.98
TM9SF3-202ENST00000443638 PHOX2BQ99453 314 aa8.9□□□□□ -0.98
TM9SF3-202ENST00000443638 OCEL1Q9H607 264 aa8.9□□□□□ -0.98
TM9SF3-202ENST00000443638 MTMR7Q9Y216 660 aa8.9□□□□□ -0.98
TM9SF3-202ENST00000443638 BANK1Q8NDB2 785 aa8.89□□□□□ -0.99
TM9SF3-202ENST00000443638 SSTR3P32745 418 aaPredicted RBP8.88□□□□□ -0.99
TM9SF3-202ENST00000443638 MDM2Q00987 491 aaPredicted RBP8.88□□□□□ -0.99
TM9SF3-202ENST00000443638 NPDC1Q9NQX5 325 aaPredicted RBP8.88□□□□□ -0.99
TM9SF3-202ENST00000443638 PPP1R15AO75807 674 aaPredicted RBP8.87□□□□□ -0.99
TM9SF3-202ENST00000443638 MFAP1P55081 439 aaKnown RBP8.87□□□□□ -0.99
TM9SF3-202ENST00000443638 CDAN1Q8IWY9 1227 aa8.87□□□□□ -0.99
TM9SF3-202ENST00000443638 PDCD7Q8N8D1 485 aaKnown RBP8.87□□□□□ -0.99
TM9SF3-202ENST00000443638 GZF1Q9H116 711 aaPredicted RBP8.87□□□□□ -0.99
TM9SF3-202ENST00000443638 ST18O60284 1047 aa8.86□□□□□ -0.99
TM9SF3-202ENST00000443638 BEGAINQ9BUH8 593 aa8.86□□□□□ -0.99
TM9SF3-202ENST00000443638 SNRKQ9NRH2 765 aa8.86□□□□□ -0.99
TM9SF3-202ENST00000443638 TBC1D12O60347 775 aa8.85□□□□□ -0.99
TM9SF3-202ENST00000443638 MYSM1Q5VVJ2 828 aa8.85□□□□□ -0.99
TM9SF3-202ENST00000443638 UPF1Q92900 1129 aaKnown RBP eCLIP8.85□□□□□ -0.99
TM9SF3-202ENST00000443638 FAM217BQ9NTX9 383 aaPredicted RBP8.85□□□□□ -0.99
TM9SF3-202ENST00000443638 POLR3EQ9NVU0 708 aa8.84□□□□□ -0.99
TM9SF3-202ENST00000443638 ZNF330Q9Y3S2 320 aaPredicted RBP8.84□□□□□ -0.99
TM9SF3-202ENST00000443638 FBXO31Q5XUX0 539 aaPredicted RBP8.83□□□□□ -1
TM9SF3-202ENST00000443638 CDHR5Q9HBB8 845 aa8.83□□□□□ -1
TM9SF3-202ENST00000443638 LOC105371045A0A1W2PR82 267 aa8.82□□□□□ -1
TM9SF3-202ENST00000443638 SNPHO15079 494 aa8.82□□□□□ -1
TM9SF3-202ENST00000443638 RFC5P40937 340 aa8.82□□□□□ -1
TM9SF3-202ENST00000443638 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.82□□□□□ -1
TM9SF3-202ENST00000443638 EVI5O60447 810 aa8.81□□□□□ -1
TM9SF3-202ENST00000443638 SOCS7O14512 581 aa8.8□□□□□ -1
TM9SF3-202ENST00000443638 CLK2P49760 499 aaKnown RBP8.8□□□□□ -1
TM9SF3-202ENST00000443638 FOXD4L5Q5VV16 416 aaPredicted RBP8.8□□□□□ -1
TM9SF3-202ENST00000443638 PPP2R2DQ66LE6 453 aa8.8□□□□□ -1
TM9SF3-202ENST00000443638 MTMR14Q8NCE2 650 aa8.8□□□□□ -1
TM9SF3-202ENST00000443638 FOXD4L4Q8WXT5 416 aaPredicted RBP8.8□□□□□ -1
TM9SF3-202ENST00000443638 EN1Q05925 392 aaPredicted RBP8.79□□□□□ -1
TM9SF3-202ENST00000443638 TMEM259Q4ZIN3 620 aa8.79□□□□□ -1
TM9SF3-202ENST00000443638 ZNF428Q96B54 188 aa8.79□□□□□ -1
TM9SF3-202ENST00000443638 BOLA1Q9Y3E2 137 aa8.79□□□□□ -1
TM9SF3-202ENST00000443638 IGSF3O75054 1194 aa8.78□□□□□ -1
TM9SF3-202ENST00000443638 PDE4CQ08493 712 aa8.78□□□□□ -1
TM9SF3-202ENST00000443638 ANO8Q9HCE9 1232 aaPredicted RBP8.78□□□□□ -1
TM9SF3-202ENST00000443638 METTL3Q86U44 580 aaKnown RBP8.77□□□□□ -1.01
TM9SF3-202ENST00000443638 GDPD2Q9HCC8 539 aa8.77□□□□□ -1.01
TM9SF3-202ENST00000443638 PATL2C9JE40 543 aaKnown RBP8.76□□□□□ -1.01
TM9SF3-202ENST00000443638 TMEM92Q6UXU6 159 aa8.76□□□□□ -1.01
TM9SF3-202ENST00000443638 L3MBTL3Q96JM7 780 aaPredicted RBP8.76□□□□□ -1.01
TM9SF3-202ENST00000443638 TBC1D2Q9BYX2 928 aa8.76□□□□□ -1.01
TM9SF3-202ENST00000443638 RBM25P49756 843 aaKnown RBP8.75□□□□□ -1.01
TM9SF3-202ENST00000443638 KCNA1Q09470 495 aa8.75□□□□□ -1.01
TM9SF3-202ENST00000443638 FBXW7Q969H0 707 aa8.75□□□□□ -1.01
TM9SF3-202ENST00000443638 GLMNQ92990 594 aa8.74□□□□□ -1.01
TM9SF3-202ENST00000443638 CALR3Q96L12 384 aaKnown RBP8.74□□□□□ -1.01
TM9SF3-202ENST00000443638 POM121CA8CG34 1229 aa8.73□□□□□ -1.01
TM9SF3-202ENST00000443638 PHF14O94880 888 aa8.73□□□□□ -1.01
TM9SF3-202ENST00000443638 BRD1O95696 1058 aa8.73□□□□□ -1.01
TM9SF3-202ENST00000443638 TUSC1Q2TAM9 212 aa8.73□□□□□ -1.01
TM9SF3-202ENST00000443638 C3orf67Q6ZVT6 689 aa8.73□□□□□ -1.01
TM9SF3-202ENST00000443638 EPAS1Q99814 870 aa8.73□□□□□ -1.01
TM9SF3-202ENST00000443638 LIMD1Q9UGP4 676 aa8.73□□□□□ -1.01
TM9SF3-202ENST00000443638 USTQ9Y2C2 406 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms