RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 CFAP70Q5T0N1 1121 aa19.69■□□□□ 0.74
SCAP-207ENST00000441517 TROQ12816 1431 aaPredicted RBP19.69■□□□□ 0.74
SCAP-207ENST00000441517 NCOA1Q15788 1441 aa19.69■□□□□ 0.74
SCAP-207ENST00000441517 MIA2Q96PC5 1412 aa19.69■□□□□ 0.74
SCAP-207ENST00000441517 KIAA1107Q9UPP5 1409 aa19.68■□□□□ 0.74
SCAP-207ENST00000441517 C20orf194Q5TEA3 1177 aa19.68■□□□□ 0.74
SCAP-207ENST00000441517 SOX12O15370 315 aa19.67■□□□□ 0.74
SCAP-207ENST00000441517 C9orf84Q5VXU9 1444 aa19.67■□□□□ 0.74
SCAP-207ENST00000441517 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
SCAP-207ENST00000441517 PDE4AP27815 886 aa19.65■□□□□ 0.74
SCAP-207ENST00000441517 MORC1Q86VD1 984 aa19.64■□□□□ 0.74
SCAP-207ENST00000441517 UGGT2Q9NYU1 1516 aa19.64■□□□□ 0.73
SCAP-207ENST00000441517 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.63■□□□□ 0.73
SCAP-207ENST00000441517 CUL7Q14999 1698 aa19.63■□□□□ 0.73
SCAP-207ENST00000441517 IPO9Q96P70 1041 aaKnown RBP19.63■□□□□ 0.73
SCAP-207ENST00000441517 CAMSAP2Q08AD1 1489 aa19.63■□□□□ 0.73
SCAP-207ENST00000441517 HECW1Q76N89 1606 aa19.62■□□□□ 0.73
SCAP-207ENST00000441517 NUP153P49790 1475 aaKnown RBP19.62■□□□□ 0.73
SCAP-207ENST00000441517 RPRD2Q5VT52 1461 aaKnown RBP19.62■□□□□ 0.73
SCAP-207ENST00000441517 KIAA0586Q9BVV6 1533 aa19.62■□□□□ 0.73
SCAP-207ENST00000441517 LAMC3Q9Y6N6 1575 aa19.6■□□□□ 0.73
SCAP-207ENST00000441517 SRPK2P78362 688 aaKnown RBP19.6■□□□□ 0.73
SCAP-207ENST00000441517 GOLGA2Q08379 1002 aa19.6■□□□□ 0.73
SCAP-207ENST00000441517 NUTM2FA1L443 756 aa19.59■□□□□ 0.73
SCAP-207ENST00000441517 ERICH6BQ5W0A0 696 aa19.59■□□□□ 0.73
SCAP-207ENST00000441517 FANCIQ9NVI1 1328 aa19.59■□□□□ 0.73
SCAP-207ENST00000441517 U2AF1L5P0DN76 240 aaPredicted RBP19.59■□□□□ 0.73
SCAP-207ENST00000441517 U2AF1Q01081 240 aaKnown RBP eCLIP19.59■□□□□ 0.73
SCAP-207ENST00000441517 COG6Q9Y2V7 657 aa19.59■□□□□ 0.73
SCAP-207ENST00000441517 CFAP43Q8NDM7 1665 aa19.58■□□□□ 0.72
SCAP-207ENST00000441517 GPATCH8Q9UKJ3 1502 aaKnown RBP19.57■□□□□ 0.72
SCAP-207ENST00000441517 BCAR3O75815 825 aa19.57■□□□□ 0.72
SCAP-207ENST00000441517 GRIN2AQ12879 1464 aa19.56■□□□□ 0.72
SCAP-207ENST00000441517 TCERG1O14776 1098 aaKnown RBP19.55■□□□□ 0.72
SCAP-207ENST00000441517 CDCA8Q53HL2 280 aa19.55■□□□□ 0.72
SCAP-207ENST00000441517 SLKQ9H2G2 1235 aaPredicted RBP19.55■□□□□ 0.72
SCAP-207ENST00000441517 POGKQ9P215 609 aa19.54■□□□□ 0.72
SCAP-207ENST00000441517 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
SCAP-207ENST00000441517 SLC12A5Q9H2X9 1139 aa19.54■□□□□ 0.72
SCAP-207ENST00000441517 KIF21AQ7Z4S6 1674 aa19.53■□□□□ 0.72
SCAP-207ENST00000441517 PANK1Q8TE04 598 aa19.53■□□□□ 0.72
SCAP-207ENST00000441517 CTTNBP2Q8WZ74 1663 aa19.53■□□□□ 0.72
SCAP-207ENST00000441517 ELL2O00472 640 aaPredicted RBP19.52■□□□□ 0.72
SCAP-207ENST00000441517 PPP2R1AP30153 589 aa19.52■□□□□ 0.72
SCAP-207ENST00000441517 EIF5BO60841 1220 aaKnown RBP19.52■□□□□ 0.71
SCAP-207ENST00000441517 ROCK1Q13464 1354 aa19.51■□□□□ 0.71
SCAP-207ENST00000441517 DISP3Q9P2K9 1392 aa19.5■□□□□ 0.71
SCAP-207ENST00000441517 ARHGAP5Q13017 1502 aa19.5■□□□□ 0.71
SCAP-207ENST00000441517 WASHC2CQ9Y4E1 1318 aa19.49■□□□□ 0.71
SCAP-207ENST00000441517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.49■□□□□ 0.71
SCAP-207ENST00000441517 FTSJ3Q8IY81 847 aaKnown RBP19.49■□□□□ 0.71
SCAP-207ENST00000441517 RSPH4AQ5TD94 716 aa19.49■□□□□ 0.71
SCAP-207ENST00000441517 DENND4BO75064 1496 aaPredicted RBP19.47■□□□□ 0.71
SCAP-207ENST00000441517 PLEKHH2Q8IVE3 1493 aa19.46■□□□□ 0.71
SCAP-207ENST00000441517 MAGI1Q96QZ7 1491 aaPredicted RBP19.46■□□□□ 0.71
SCAP-207ENST00000441517 DHX29Q7Z478 1369 aaKnown RBP19.46■□□□□ 0.71
SCAP-207ENST00000441517 CABP2Q9NPB3 220 aa19.46■□□□□ 0.71
SCAP-207ENST00000441517 MINK1Q8N4C8 1332 aaPredicted RBP19.45■□□□□ 0.7
SCAP-207ENST00000441517 DISP1Q96F81 1524 aa19.45■□□□□ 0.7
SCAP-207ENST00000441517 ATP10BO94823 1461 aa19.45■□□□□ 0.7
SCAP-207ENST00000441517 BRD4O60885 1362 aaPredicted RBP19.44■□□□□ 0.7
SCAP-207ENST00000441517 PZPP20742 1482 aa19.44■□□□□ 0.7
SCAP-207ENST00000441517 APBB1O00213 710 aa19.44■□□□□ 0.7
SCAP-207ENST00000441517 KANK1Q14678 1352 aa19.44■□□□□ 0.7
SCAP-207ENST00000441517 GGNBP2Q9H3C7 697 aa19.43■□□□□ 0.7
SCAP-207ENST00000441517 ESF1Q9H501 851 aaKnown RBP19.43■□□□□ 0.7
SCAP-207ENST00000441517 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
SCAP-207ENST00000441517 SMG6Q86US8 1419 aaKnown RBP19.43■□□□□ 0.7
SCAP-207ENST00000441517 ZBTB7CA1YPR0 619 aa19.43■□□□□ 0.7
SCAP-207ENST00000441517 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
SCAP-207ENST00000441517 SCAPERQ9BY12 1400 aa19.43■□□□□ 0.7
SCAP-207ENST00000441517 FBLN1P23142 703 aa19.42■□□□□ 0.7
SCAP-207ENST00000441517 PDE3BQ13370 1112 aa19.42■□□□□ 0.7
SCAP-207ENST00000441517 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
SCAP-207ENST00000441517 WDR62O43379 1518 aa19.41■□□□□ 0.7
SCAP-207ENST00000441517 UPF2Q9HAU5 1272 aaKnown RBP19.4■□□□□ 0.7
SCAP-207ENST00000441517 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
SCAP-207ENST00000441517 MTHFSP49914 203 aa19.39■□□□□ 0.7
SCAP-207ENST00000441517 ADGRF5Q8IZF2 1346 aa19.39■□□□□ 0.7
SCAP-207ENST00000441517 HSP90AA1P07900 732 aaKnown RBP19.39■□□□□ 0.69
SCAP-207ENST00000441517 TPRNQ4KMQ1 711 aa19.39■□□□□ 0.69
SCAP-207ENST00000441517 MAPK8IP3Q9UPT6 1336 aa19.38■□□□□ 0.69
SCAP-207ENST00000441517 GZF1Q9H116 711 aaPredicted RBP19.38■□□□□ 0.69
SCAP-207ENST00000441517 TEX14Q8IWB6 1497 aa19.37■□□□□ 0.69
SCAP-207ENST00000441517 TESK2Q96S53 571 aa19.37■□□□□ 0.69
SCAP-207ENST00000441517 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.37■□□□□ 0.69
SCAP-207ENST00000441517 TCOF1Q13428 1488 aaKnown RBP19.37■□□□□ 0.69
SCAP-207ENST00000441517 CENPJQ9HC77 1338 aaPredicted RBP19.37■□□□□ 0.69
SCAP-207ENST00000441517 SPINK5Q9NQ38 1064 aaPredicted RBP19.37■□□□□ 0.69
SCAP-207ENST00000441517 ABCA5Q8WWZ7 1642 aa19.37■□□□□ 0.69
SCAP-207ENST00000441517 ARID4BQ4LE39 1312 aaPredicted RBP19.36■□□□□ 0.69
SCAP-207ENST00000441517 TSR2Q969E8 191 aaKnown RBP19.36■□□□□ 0.69
SCAP-207ENST00000441517 ITPRIPQ8IWB1 547 aa19.36■□□□□ 0.69
SCAP-207ENST00000441517 SAMD9Q5K651 1589 aa19.36■□□□□ 0.69
SCAP-207ENST00000441517 PER1O15534 1290 aaPredicted RBP19.36■□□□□ 0.69
SCAP-207ENST00000441517 KIF14Q15058 1648 aa19.35■□□□□ 0.69
SCAP-207ENST00000441517 ERBINQ96RT1 1412 aa19.35■□□□□ 0.69
SCAP-207ENST00000441517 C14orf37Q86TY3 774 aa19.34■□□□□ 0.69
SCAP-207ENST00000441517 FOXD4L1Q9NU39 408 aa19.34■□□□□ 0.69
SCAP-207ENST00000441517 TCP11L2Q8N4U5 519 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms