RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 GNPATO15228 680 aa10.94□□□□□ -0.66
PFDN4-202ENST00000441080 C6orf132Q5T0Z8 1188 aa10.93□□□□□ -0.66
PFDN4-202ENST00000441080 FAM163AQ96GL9 167 aaPredicted RBP10.92□□□□□ -0.66
PFDN4-202ENST00000441080 EMP3P54852 163 aa10.91□□□□□ -0.66
PFDN4-202ENST00000441080 NPDC1Q9NQX5 325 aaPredicted RBP10.91□□□□□ -0.66
PFDN4-202ENST00000441080 ERBB3P21860 1342 aa10.9□□□□□ -0.66
PFDN4-202ENST00000441080 BCL2L12Q9HB09 334 aa10.9□□□□□ -0.66
PFDN4-202ENST00000441080 MAP2K5Q13163 448 aa10.89□□□□□ -0.67
PFDN4-202ENST00000441080 CERKQ8TCT0 537 aa10.89□□□□□ -0.67
PFDN4-202ENST00000441080 MARVELD3Q96A59 401 aa10.89□□□□□ -0.67
PFDN4-202ENST00000441080 FECHP22830 423 aa10.88□□□□□ -0.67
PFDN4-202ENST00000441080 VARS2Q5ST30 1063 aaKnown RBP10.88□□□□□ -0.67
PFDN4-202ENST00000441080 AK7Q96M32 723 aa10.88□□□□□ -0.67
PFDN4-202ENST00000441080 MINK1Q8N4C8 1332 aaPredicted RBP10.87□□□□□ -0.67
PFDN4-202ENST00000441080 PTPREP23469 700 aa10.87□□□□□ -0.67
PFDN4-202ENST00000441080 IRF6O14896 467 aa10.84□□□□□ -0.67
PFDN4-202ENST00000441080 CCDC102AQ96A19 550 aa10.84□□□□□ -0.67
PFDN4-202ENST00000441080 KCNH8Q96L42 1107 aa10.84□□□□□ -0.67
PFDN4-202ENST00000441080 FAM205CA6NFA0 338 aa10.83□□□□□ -0.68
PFDN4-202ENST00000441080 PPP1R3GB7ZBB8 358 aa10.83□□□□□ -0.68
PFDN4-202ENST00000441080 COL9A1P20849 921 aa10.83□□□□□ -0.68
PFDN4-202ENST00000441080 KCNK17Q96T54 332 aa10.83□□□□□ -0.68
PFDN4-202ENST00000441080 PADI6Q6TGC4 694 aa10.82□□□□□ -0.68
PFDN4-202ENST00000441080 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
PFDN4-202ENST00000441080 PRSS12P56730 875 aa10.81□□□□□ -0.68
PFDN4-202ENST00000441080 CDCA7LQ96GN5 454 aa10.81□□□□□ -0.68
PFDN4-202ENST00000441080 TRIM66O15016 1216 aa10.8□□□□□ -0.68
PFDN4-202ENST00000441080 LCE2DQ5TA82 110 aaPredicted RBP10.8□□□□□ -0.68
PFDN4-202ENST00000441080 NEUROD2Q15784 382 aa10.79□□□□□ -0.68
PFDN4-202ENST00000441080 BRPF1P55201 1214 aaPredicted RBP10.78□□□□□ -0.68
PFDN4-202ENST00000441080 HS3ST6Q96QI5 342 aa10.78□□□□□ -0.68
PFDN4-202ENST00000441080 ARHGAP33O14559 1287 aa10.77□□□□□ -0.69
PFDN4-202ENST00000441080 PSEN2P49810 448 aa10.77□□□□□ -0.69
PFDN4-202ENST00000441080 ZNF687Q8N1G0 1237 aa10.77□□□□□ -0.69
PFDN4-202ENST00000441080 PBX2P40425 430 aa10.76□□□□□ -0.69
PFDN4-202ENST00000441080 PDE4DQ08499 809 aa10.76□□□□□ -0.69
PFDN4-202ENST00000441080 TTC13Q8NBP0 860 aa10.76□□□□□ -0.69
PFDN4-202ENST00000441080 FAM161AQ3B820 660 aa10.75□□□□□ -0.69
PFDN4-202ENST00000441080 AXIN2Q9Y2T1 843 aa10.75□□□□□ -0.69
PFDN4-202ENST00000441080 POTEB3A0JP26 581 aa10.74□□□□□ -0.69
PFDN4-202ENST00000441080 TRIM6-TRIM34B2RNG4 842 aa10.74□□□□□ -0.69
PFDN4-202ENST00000441080 PROX2Q3B8N5 592 aa10.74□□□□□ -0.69
PFDN4-202ENST00000441080 POTEBQ6S5H4 581 aa10.74□□□□□ -0.69
PFDN4-202ENST00000441080 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
PFDN4-202ENST00000441080 FAM198AQ9UFP1 575 aa10.74□□□□□ -0.69
PFDN4-202ENST00000441080 TSKSQ9UJT2 592 aa10.74□□□□□ -0.69
PFDN4-202ENST00000441080 ADGRG1Q9Y653 693 aa10.74□□□□□ -0.69
PFDN4-202ENST00000441080 OATP04181 439 aa10.73□□□□□ -0.69
PFDN4-202ENST00000441080 AMHR2Q16671 573 aa10.73□□□□□ -0.69
PFDN4-202ENST00000441080 ZBED2Q9BTP6 218 aa10.73□□□□□ -0.69
PFDN4-202ENST00000441080 DMRTA1Q5VZB9 504 aa10.71□□□□□ -0.69
PFDN4-202ENST00000441080 METTL3Q86U44 580 aaKnown RBP10.71□□□□□ -0.69
PFDN4-202ENST00000441080 PACS2Q86VP3 889 aa10.71□□□□□ -0.69
PFDN4-202ENST00000441080 GPBP1L1Q9HC44 474 aaPredicted RBP10.71□□□□□ -0.69
PFDN4-202ENST00000441080 NBPF26B4DH59 902 aa10.7□□□□□ -0.7
PFDN4-202ENST00000441080 TTLL12Q14166 644 aaPredicted RBP10.7□□□□□ -0.7
PFDN4-202ENST00000441080 RBM46Q8TBY0 533 aaKnown RBP10.7□□□□□ -0.7
PFDN4-202ENST00000441080 PXYLP1Q8TE99 480 aa10.7□□□□□ -0.7
PFDN4-202ENST00000441080 ONECUT3O60422 494 aaPredicted RBP10.69□□□□□ -0.7
PFDN4-202ENST00000441080 PHOX2BQ99453 314 aa10.69□□□□□ -0.7
PFDN4-202ENST00000441080 NUDT18Q6ZVK8 323 aa10.68□□□□□ -0.7
PFDN4-202ENST00000441080 PARP9Q8IXQ6 854 aa10.68□□□□□ -0.7
PFDN4-202ENST00000441080 SLC4A5Q9BY07 1137 aa10.68□□□□□ -0.7
PFDN4-202ENST00000441080 PNMA3Q9UL41 463 aa10.68□□□□□ -0.7
PFDN4-202ENST00000441080 TATDN2Q93075 761 aa10.67□□□□□ -0.7
PFDN4-202ENST00000441080 KDM4CQ9H3R0 1056 aa10.67□□□□□ -0.7
PFDN4-202ENST00000441080 KIAA1468Q9P260 1216 aa10.67□□□□□ -0.7
PFDN4-202ENST00000441080 MDM2Q00987 491 aaPredicted RBP10.66□□□□□ -0.7
PFDN4-202ENST00000441080 C3orf80F5H4A9 247 aa10.65□□□□□ -0.7
PFDN4-202ENST00000441080 CLCN1P35523 988 aa10.65□□□□□ -0.7
PFDN4-202ENST00000441080 NLRP7Q8WX94 980 aa10.65□□□□□ -0.7
PFDN4-202ENST00000441080 EYA1Q99502 592 aa10.65□□□□□ -0.7
PFDN4-202ENST00000441080 SMAPO00193 183 aa10.64□□□□□ -0.71
PFDN4-202ENST00000441080 RABGEF1Q9UJ41 708 aa10.64□□□□□ -0.71
PFDN4-202ENST00000441080 VPS9D1Q9Y2B5 631 aa10.64□□□□□ -0.71
PFDN4-202ENST00000441080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.63□□□□□ -0.71
PFDN4-202ENST00000441080 LSM11P83369 360 aaKnown RBP eCLIP10.63□□□□□ -0.71
PFDN4-202ENST00000441080 GPCPD1Q9NPB8 672 aa10.63□□□□□ -0.71
PFDN4-202ENST00000441080 RCCD1A6NED2 376 aa10.62□□□□□ -0.71
PFDN4-202ENST00000441080 GIGYF2Q6Y7W6 1299 aaKnown RBP10.62□□□□□ -0.71
PFDN4-202ENST00000441080 TK2O00142 265 aa10.61□□□□□ -0.71
PFDN4-202ENST00000441080 DNAJB2P25686 324 aa10.61□□□□□ -0.71
PFDN4-202ENST00000441080 REPIN1Q9BWE0 567 aaKnown RBP10.61□□□□□ -0.71
PFDN4-202ENST00000441080 SEPT9Q9UHD8 586 aaPredicted RBP10.61□□□□□ -0.71
PFDN4-202ENST00000441080 TMUB1Q9BVT8 246 aa10.6□□□□□ -0.71
PFDN4-202ENST00000441080 POTEMA6NI47 508 aa10.59□□□□□ -0.71
PFDN4-202ENST00000441080 TMEM132AQ24JP5 1023 aa10.59□□□□□ -0.71
PFDN4-202ENST00000441080 POTEGQ6S5H5 508 aa10.59□□□□□ -0.71
PFDN4-202ENST00000441080 NBPF3Q9H094 633 aa10.59□□□□□ -0.71
PFDN4-202ENST00000441080 ADGRD1Q6QNK2 874 aa10.58□□□□□ -0.72
PFDN4-202ENST00000441080 TMEM134Q9H6X4 195 aa10.57□□□□□ -0.72
PFDN4-202ENST00000441080 DAXXQ9UER7 740 aaPredicted RBP10.57□□□□□ -0.72
PFDN4-202ENST00000441080 MS4A1P11836 297 aa10.56□□□□□ -0.72
PFDN4-202ENST00000441080 FAM98CQ17RN3 349 aaKnown RBP10.56□□□□□ -0.72
PFDN4-202ENST00000441080 ANKRD13DQ6ZTN6 518 aa10.56□□□□□ -0.72
PFDN4-202ENST00000441080 IL27Q8NEV9 243 aa10.56□□□□□ -0.72
PFDN4-202ENST00000441080 FAM217BQ9NTX9 383 aaPredicted RBP10.56□□□□□ -0.72
PFDN4-202ENST00000441080 SSTR3P32745 418 aaPredicted RBP10.55□□□□□ -0.72
PFDN4-202ENST00000441080 LAPTM4BQ86VI4 370 aa10.55□□□□□ -0.72
PFDN4-202ENST00000441080 DDRGK1Q96HY6 314 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms