RNA–Protein interactions for RNA: ENST00000439450.1

AL035258.1-201, humanhuman

TSL 3 BASIC

Gene AL035258.1, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL035258.1-201ENST00000439450 PROX2Q3B8N5 592 aa12.99□□□□□ -0.33
AL035258.1-201ENST00000439450 LAPTM4BQ86VI4 370 aa12.99□□□□□ -0.33
AL035258.1-201ENST00000439450 COL9A1P20849 921 aa12.98□□□□□ -0.33
AL035258.1-201ENST00000439450 IRX2Q9BZI1 471 aaPredicted RBP12.98□□□□□ -0.33
AL035258.1-201ENST00000439450 EPAS1Q99814 870 aa12.96□□□□□ -0.33
AL035258.1-201ENST00000439450 CADPS2Q86UW7 1296 aa12.95□□□□□ -0.34
AL035258.1-201ENST00000439450 ONECUT3O60422 494 aaPredicted RBP12.94□□□□□ -0.34
AL035258.1-201ENST00000439450 NYAP1Q6ZVC0 841 aa12.94□□□□□ -0.34
AL035258.1-201ENST00000439450 KIAA1468Q9P260 1216 aa12.93□□□□□ -0.34
AL035258.1-201ENST00000439450 SOWAHBA6NEL2 793 aa12.92□□□□□ -0.34
AL035258.1-201ENST00000439450 BCAMP50895 628 aa12.92□□□□□ -0.34
AL035258.1-201ENST00000439450 ITGBL1O95965 494 aaPredicted RBP12.91□□□□□ -0.34
AL035258.1-201ENST00000439450 CAMK2BQ13554 666 aa12.91□□□□□ -0.34
AL035258.1-201ENST00000439450 C6orf132Q5T0Z8 1188 aa12.91□□□□□ -0.34
AL035258.1-201ENST00000439450 ZFRQ96KR1 1074 aaKnown RBP12.91□□□□□ -0.34
AL035258.1-201ENST00000439450 DPYSL4O14531 572 aa12.89□□□□□ -0.35
AL035258.1-201ENST00000439450 TRIM6-TRIM34B2RNG4 842 aa12.85□□□□□ -0.35
AL035258.1-201ENST00000439450 RBM33Q96EV2 1170 aaKnown RBP12.85□□□□□ -0.35
AL035258.1-201ENST00000439450 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
AL035258.1-201ENST00000439450 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
AL035258.1-201ENST00000439450 KCNC4Q03721 635 aa12.83□□□□□ -0.36
AL035258.1-201ENST00000439450 WBP1LQ9NX94 342 aa12.83□□□□□ -0.36
AL035258.1-201ENST00000439450 DDX12PQ92771 950 aa12.81□□□□□ -0.36
AL035258.1-201ENST00000439450 LRCH3Q96II8 777 aa12.81□□□□□ -0.36
AL035258.1-201ENST00000439450 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.81□□□□□ -0.36
AL035258.1-201ENST00000439450 TSR3Q9UJK0 312 aaKnown RBP12.8□□□□□ -0.36
AL035258.1-201ENST00000439450 PACS2Q86VP3 889 aa12.79□□□□□ -0.36
AL035258.1-201ENST00000439450 HPS5Q9UPZ3 1129 aa12.77□□□□□ -0.37
AL035258.1-201ENST00000439450 MAP3K7O43318 606 aa12.76□□□□□ -0.37
AL035258.1-201ENST00000439450 NBR1Q14596 966 aa12.76□□□□□ -0.37
AL035258.1-201ENST00000439450 EN1Q05925 392 aaPredicted RBP12.75□□□□□ -0.37
AL035258.1-201ENST00000439450 BBXQ8WY36 941 aaPredicted RBP12.74□□□□□ -0.37
AL035258.1-201ENST00000439450 SPDYE16A6NNV3 312 aaPredicted RBP12.73□□□□□ -0.37
AL035258.1-201ENST00000439450 PDIA6Q15084 440 aa12.72□□□□□ -0.37
AL035258.1-201ENST00000439450 PPP4CP60510 307 aa12.7□□□□□ -0.38
AL035258.1-201ENST00000439450 TSR1Q2NL82 804 aaKnown RBP12.7□□□□□ -0.38
AL035258.1-201ENST00000439450 Q6ZNB5 142 aa12.7□□□□□ -0.38
AL035258.1-201ENST00000439450 TSKSQ9UJT2 592 aa12.7□□□□□ -0.38
AL035258.1-201ENST00000439450 CERKQ8TCT0 537 aa12.68□□□□□ -0.38
AL035258.1-201ENST00000439450 CDCA7LQ96GN5 454 aa12.66□□□□□ -0.38
AL035258.1-201ENST00000439450 PRSS12P56730 875 aa12.65□□□□□ -0.38
AL035258.1-201ENST00000439450 LAPTM4AQ15012 233 aa12.64□□□□□ -0.39
AL035258.1-201ENST00000439450 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
AL035258.1-201ENST00000439450 NBPF26B4DH59 902 aa12.62□□□□□ -0.39
AL035258.1-201ENST00000439450 E2F4Q16254 413 aa12.62□□□□□ -0.39
AL035258.1-201ENST00000439450 SAMD7Q7Z3H4 446 aa12.62□□□□□ -0.39
AL035258.1-201ENST00000439450 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.62□□□□□ -0.39
AL035258.1-201ENST00000439450 HDGFP51858 240 aaKnown RBP12.61□□□□□ -0.39
AL035258.1-201ENST00000439450 WDR70Q9NW82 654 aa12.61□□□□□ -0.39
AL035258.1-201ENST00000439450 GRXCR2A6NFK2 248 aa12.6□□□□□ -0.39
AL035258.1-201ENST00000439450 SMAPO00193 183 aa12.6□□□□□ -0.39
AL035258.1-201ENST00000439450 TATDN2Q93075 761 aa12.58□□□□□ -0.4
AL035258.1-201ENST00000439450 PNMA3Q9UL41 463 aa12.58□□□□□ -0.4
AL035258.1-201ENST00000439450 TJAP1Q5JTD0 557 aa12.57□□□□□ -0.4
AL035258.1-201ENST00000439450 IL21Q9HBE4 155 aa12.56□□□□□ -0.4
AL035258.1-201ENST00000439450 ARIH1Q9Y4X5 557 aaPredicted RBP12.56□□□□□ -0.4
AL035258.1-201ENST00000439450 FAM198AQ9UFP1 575 aa12.55□□□□□ -0.4
AL035258.1-201ENST00000439450 GFRA3O60609 400 aa12.54□□□□□ -0.4
AL035258.1-201ENST00000439450 MTRQ99707 1265 aa12.54□□□□□ -0.4
AL035258.1-201ENST00000439450 RNF40O75150 1001 aa12.53□□□□□ -0.4
AL035258.1-201ENST00000439450 NECTIN2Q92692 538 aa12.53□□□□□ -0.4
AL035258.1-201ENST00000439450 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
AL035258.1-201ENST00000439450 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
AL035258.1-201ENST00000439450 PRKD2Q9BZL6 878 aa12.51□□□□□ -0.41
AL035258.1-201ENST00000439450 NUDT18Q6ZVK8 323 aa12.5□□□□□ -0.41
AL035258.1-201ENST00000439450 OSBPP22059 807 aa12.48□□□□□ -0.41
AL035258.1-201ENST00000439450 PPP1R18Q6NYC8 613 aa12.48□□□□□ -0.41
AL035258.1-201ENST00000439450 V9GY48 417 aaPredicted RBP12.48□□□□□ -0.41
AL035258.1-201ENST00000439450 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
AL035258.1-201ENST00000439450 TRAF7Q6Q0C0 670 aa12.47□□□□□ -0.41
AL035258.1-201ENST00000439450 CDHR5Q9HBB8 845 aa12.47□□□□□ -0.41
AL035258.1-201ENST00000439450 C3orf80F5H4A9 247 aa12.46□□□□□ -0.41
AL035258.1-201ENST00000439450 CFAP44Q96MT7 982 aa12.46□□□□□ -0.41
AL035258.1-201ENST00000439450 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
AL035258.1-201ENST00000439450 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.45□□□□□ -0.42
AL035258.1-201ENST00000439450 NRG2O14511 850 aaPredicted RBP12.44□□□□□ -0.42
AL035258.1-201ENST00000439450 GGCXP38435 758 aa12.44□□□□□ -0.42
AL035258.1-201ENST00000439450 APLP1P51693 650 aa12.44□□□□□ -0.42
AL035258.1-201ENST00000439450 SLF2Q8IX21 1173 aa12.44□□□□□ -0.42
AL035258.1-201ENST00000439450 ZNF516Q92618 1163 aa12.44□□□□□ -0.42
AL035258.1-201ENST00000439450 SWT1Q5T5J6 900 aaKnown RBP12.4□□□□□ -0.42
AL035258.1-201ENST00000439450 PADI6Q6TGC4 694 aa12.4□□□□□ -0.42
AL035258.1-201ENST00000439450 TTC13Q8NBP0 860 aa12.39□□□□□ -0.43
AL035258.1-201ENST00000439450 PRR14Q9BWN1 585 aa12.38□□□□□ -0.43
AL035258.1-201ENST00000439450 COPS2P61201 443 aa12.37□□□□□ -0.43
AL035258.1-201ENST00000439450 NPDC1Q9NQX5 325 aaPredicted RBP12.36□□□□□ -0.43
AL035258.1-201ENST00000439450 LCE2BO14633 110 aa12.35□□□□□ -0.43
AL035258.1-201ENST00000439450 NKX2-3Q8TAU0 364 aa12.35□□□□□ -0.43
AL035258.1-201ENST00000439450 AMER1Q5JTC6 1135 aaPredicted RBP12.34□□□□□ -0.43
AL035258.1-201ENST00000439450 TMUB1Q9BVT8 246 aa12.34□□□□□ -0.43
AL035258.1-201ENST00000439450 PDZRN3Q9UPQ7 1066 aa12.34□□□□□ -0.43
AL035258.1-201ENST00000439450 ZPR1O75312 459 aa12.31□□□□□ -0.44
AL035258.1-201ENST00000439450 EYA1Q99502 592 aa12.31□□□□□ -0.44
AL035258.1-201ENST00000439450 PCDHB3Q9Y5E6 796 aa12.3□□□□□ -0.44
AL035258.1-201ENST00000439450 ARHGEF1Q92888 912 aaKnown RBP12.25□□□□□ -0.45
AL035258.1-201ENST00000439450 DNAJB2P25686 324 aa12.24□□□□□ -0.45
AL035258.1-201ENST00000439450 RBM46Q8TBY0 533 aaKnown RBP12.24□□□□□ -0.45
AL035258.1-201ENST00000439450 ZNF787Q6DD87 383 aa12.23□□□□□ -0.45
AL035258.1-201ENST00000439450 SLC19A1P41440 591 aa12.21□□□□□ -0.45
AL035258.1-201ENST00000439450 KMT5BQ4FZB7 885 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms