RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 TYW1BQ6NUM6 668 aa7.96□□□□□ -1.14
HMGB1P12-201ENST00000438594 RABGEF1Q9UJ41 708 aa7.96□□□□□ -1.14
HMGB1P12-201ENST00000438594 MFSD10Q14728 455 aa7.95□□□□□ -1.14
HMGB1P12-201ENST00000438594 PHF14O94880 888 aa7.93□□□□□ -1.14
HMGB1P12-201ENST00000438594 FBXW7Q969H0 707 aa7.93□□□□□ -1.14
HMGB1P12-201ENST00000438594 KIAA1468Q9P260 1216 aa7.93□□□□□ -1.14
HMGB1P12-201ENST00000438594 CADPS2Q86UW7 1296 aa7.92□□□□□ -1.14
HMGB1P12-201ENST00000438594 RBM33Q96EV2 1170 aaKnown RBP7.92□□□□□ -1.14
HMGB1P12-201ENST00000438594 SEPT9Q9UHD8 586 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P12-201ENST00000438594 SOWAHBA6NEL2 793 aa7.9□□□□□ -1.14
HMGB1P12-201ENST00000438594 ZFRQ96KR1 1074 aaKnown RBP7.9□□□□□ -1.14
HMGB1P12-201ENST00000438594 DPYSL4O14531 572 aa7.89□□□□□ -1.15
HMGB1P12-201ENST00000438594 C6orf132Q5T0Z8 1188 aa7.89□□□□□ -1.15
HMGB1P12-201ENST00000438594 LAPTM4BQ86VI4 370 aa7.89□□□□□ -1.15
HMGB1P12-201ENST00000438594 EPAS1Q99814 870 aa7.88□□□□□ -1.15
HMGB1P12-201ENST00000438594 WBP1LQ9NX94 342 aa7.88□□□□□ -1.15
HMGB1P12-201ENST00000438594 DDX12PQ92771 950 aa7.87□□□□□ -1.15
HMGB1P12-201ENST00000438594 ITGBL1O95965 494 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P12-201ENST00000438594 KCNC4Q03721 635 aa7.86□□□□□ -1.15
HMGB1P12-201ENST00000438594 Q6ZNB5 142 aa7.86□□□□□ -1.15
HMGB1P12-201ENST00000438594 TRIM6-TRIM34B2RNG4 842 aa7.85□□□□□ -1.15
HMGB1P12-201ENST00000438594 LRCH3Q96II8 777 aa7.85□□□□□ -1.15
HMGB1P12-201ENST00000438594 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P12-201ENST00000438594 HPS5Q9UPZ3 1129 aa7.85□□□□□ -1.15
HMGB1P12-201ENST00000438594 FAM98CQ17RN3 349 aaKnown RBP7.84□□□□□ -1.15
HMGB1P12-201ENST00000438594 NYAP1Q6ZVC0 841 aa7.84□□□□□ -1.15
HMGB1P12-201ENST00000438594 MAP3K7O43318 606 aa7.83□□□□□ -1.16
HMGB1P12-201ENST00000438594 ONECUT3O60422 494 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P12-201ENST00000438594 NBR1Q14596 966 aa7.83□□□□□ -1.16
HMGB1P12-201ENST00000438594 TSR3Q9UJK0 312 aaKnown RBP7.82□□□□□ -1.16
HMGB1P12-201ENST00000438594 CAMK2BQ13554 666 aa7.8□□□□□ -1.16
HMGB1P12-201ENST00000438594 PACS2Q86VP3 889 aa7.8□□□□□ -1.16
HMGB1P12-201ENST00000438594 PPP4CP60510 307 aa7.79□□□□□ -1.16
HMGB1P12-201ENST00000438594 TSR1Q2NL82 804 aaKnown RBP7.79□□□□□ -1.16
HMGB1P12-201ENST00000438594 SMAPO00193 183 aa7.77□□□□□ -1.17
HMGB1P12-201ENST00000438594 EN1Q05925 392 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P12-201ENST00000438594 TSKSQ9UJT2 592 aa7.77□□□□□ -1.17
HMGB1P12-201ENST00000438594 RNF40O75150 1001 aa7.75□□□□□ -1.17
HMGB1P12-201ENST00000438594 SAMD7Q7Z3H4 446 aa7.75□□□□□ -1.17
HMGB1P12-201ENST00000438594 GRXCR2A6NFK2 248 aa7.74□□□□□ -1.17
HMGB1P12-201ENST00000438594 GFRA3O60609 400 aa7.73□□□□□ -1.17
HMGB1P12-201ENST00000438594 CDCA7LQ96GN5 454 aa7.73□□□□□ -1.17
HMGB1P12-201ENST00000438594 PDIA6Q15084 440 aa7.72□□□□□ -1.17
HMGB1P12-201ENST00000438594 PNMA3Q9UL41 463 aa7.72□□□□□ -1.17
HMGB1P12-201ENST00000438594 SPDYE16A6NNV3 312 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P12-201ENST00000438594 PRSS12P56730 875 aa7.71□□□□□ -1.18
HMGB1P12-201ENST00000438594 LAPTM4AQ15012 233 aa7.71□□□□□ -1.18
HMGB1P12-201ENST00000438594 PRKD2Q9BZL6 878 aa7.71□□□□□ -1.18
HMGB1P12-201ENST00000438594 NBPF26B4DH59 902 aa7.7□□□□□ -1.18
HMGB1P12-201ENST00000438594 HDGFP51858 240 aaKnown RBP7.7□□□□□ -1.18
HMGB1P12-201ENST00000438594 BBXQ8WY36 941 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P12-201ENST00000438594 TJAP1Q5JTD0 557 aa7.69□□□□□ -1.18
HMGB1P12-201ENST00000438594 TATDN2Q93075 761 aa7.69□□□□□ -1.18
HMGB1P12-201ENST00000438594 MTRQ99707 1265 aa7.69□□□□□ -1.18
HMGB1P12-201ENST00000438594 TRAF7Q6Q0C0 670 aa7.68□□□□□ -1.18
HMGB1P12-201ENST00000438594 CERKQ8TCT0 537 aa7.68□□□□□ -1.18
HMGB1P12-201ENST00000438594 IL21Q9HBE4 155 aa7.68□□□□□ -1.18
HMGB1P12-201ENST00000438594 WDR70Q9NW82 654 aa7.68□□□□□ -1.18
HMGB1P12-201ENST00000438594 FAM198AQ9UFP1 575 aa7.68□□□□□ -1.18
HMGB1P12-201ENST00000438594 E2F4Q16254 413 aa7.67□□□□□ -1.18
HMGB1P12-201ENST00000438594 PPP1R18Q6NYC8 613 aa7.67□□□□□ -1.18
HMGB1P12-201ENST00000438594 NUDT18Q6ZVK8 323 aa7.67□□□□□ -1.18
HMGB1P12-201ENST00000438594 C3orf80F5H4A9 247 aa7.66□□□□□ -1.18
HMGB1P12-201ENST00000438594 PRIM1P49642 420 aaKnown RBP7.66□□□□□ -1.18
HMGB1P12-201ENST00000438594 SPRYD3Q8NCJ5 442 aa7.66□□□□□ -1.18
HMGB1P12-201ENST00000438594 ZNF516Q92618 1163 aa7.66□□□□□ -1.18
HMGB1P12-201ENST00000438594 CDHR5Q9HBB8 845 aa7.66□□□□□ -1.18
HMGB1P12-201ENST00000438594 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P12-201ENST00000438594 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.64□□□□□ -1.19
HMGB1P12-201ENST00000438594 APLP1P51693 650 aa7.63□□□□□ -1.19
HMGB1P12-201ENST00000438594 COPS2P61201 443 aa7.63□□□□□ -1.19
HMGB1P12-201ENST00000438594 CFAP44Q96MT7 982 aa7.63□□□□□ -1.19
HMGB1P12-201ENST00000438594 NRG2O14511 850 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P12-201ENST00000438594 NKX2-3Q8TAU0 364 aa7.62□□□□□ -1.19
HMGB1P12-201ENST00000438594 LCE2BO14633 110 aa7.61□□□□□ -1.19
HMGB1P12-201ENST00000438594 OSBPP22059 807 aa7.6□□□□□ -1.19
HMGB1P12-201ENST00000438594 GGCXP38435 758 aa7.6□□□□□ -1.19
HMGB1P12-201ENST00000438594 SLC4A3P48751 1232 aa7.6□□□□□ -1.19
HMGB1P12-201ENST00000438594 SWT1Q5T5J6 900 aaKnown RBP7.6□□□□□ -1.19
HMGB1P12-201ENST00000438594 PDZRN3Q9UPQ7 1066 aa7.6□□□□□ -1.19
HMGB1P12-201ENST00000438594 V9GY48 417 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P12-201ENST00000438594 PADI6Q6TGC4 694 aa7.59□□□□□ -1.19
HMGB1P12-201ENST00000438594 PAXIP1Q6ZW49 1069 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P12-201ENST00000438594 SLF2Q8IX21 1173 aa7.59□□□□□ -1.19
HMGB1P12-201ENST00000438594 NECTIN2Q92692 538 aa7.59□□□□□ -1.19
HMGB1P12-201ENST00000438594 RBM27Q9P2N5 1060 aaKnown RBP7.57□□□□□ -1.2
HMGB1P12-201ENST00000438594 ZNF787Q6DD87 383 aa7.56□□□□□ -1.2
HMGB1P12-201ENST00000438594 ARIH1Q9Y4X5 557 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P12-201ENST00000438594 PCDHB3Q9Y5E6 796 aa7.54□□□□□ -1.2
HMGB1P12-201ENST00000438594 ZPR1O75312 459 aa7.53□□□□□ -1.2
HMGB1P12-201ENST00000438594 PRR14Q9BWN1 585 aa7.52□□□□□ -1.21
HMGB1P12-201ENST00000438594 BLOC1S3Q6QNY0 202 aa7.51□□□□□ -1.21
HMGB1P12-201ENST00000438594 TTC13Q8NBP0 860 aa7.51□□□□□ -1.21
HMGB1P12-201ENST00000438594 NPDC1Q9NQX5 325 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P12-201ENST00000438594 SLC19A1P41440 591 aa7.5□□□□□ -1.21
HMGB1P12-201ENST00000438594 TMUB1Q9BVT8 246 aa7.5□□□□□ -1.21
HMGB1P12-201ENST00000438594 EYA1Q99502 592 aa7.49□□□□□ -1.21
HMGB1P12-201ENST00000438594 RNF223E7ERA6 249 aa7.48□□□□□ -1.21
HMGB1P12-201ENST00000438594 TLL1O43897 1013 aa7.48□□□□□ -1.21
HMGB1P12-201ENST00000438594 PKDCCQ504Y2 493 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms