RNA–Protein interactions for RNA: ENST00000438097.6

UBE3A-204, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 8,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-204ENST00000438097 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.29■□□□□ 0.36
UBE3A-204ENST00000438097 SYNE3Q6ZMZ3 975 aa17.29■□□□□ 0.36
UBE3A-204ENST00000438097 CCDC43Q96MW1 224 aaKnown RBP17.27■□□□□ 0.36
UBE3A-204ENST00000438097 PDE4CQ08493 712 aa17.27■□□□□ 0.36
UBE3A-204ENST00000438097 WWC1Q8IX03 1113 aa17.27■□□□□ 0.36
UBE3A-204ENST00000438097 FMN1Q68DA7 1419 aa17.27■□□□□ 0.35
UBE3A-204ENST00000438097 CCDC18Q5T9S5 1454 aa17.26■□□□□ 0.35
UBE3A-204ENST00000438097 MLECQ14165 292 aa17.26■□□□□ 0.35
UBE3A-204ENST00000438097 CWC22Q9HCG8 908 aaKnown RBP17.26■□□□□ 0.35
UBE3A-204ENST00000438097 CDR1P51861 262 aa17.26■□□□□ 0.35
UBE3A-204ENST00000438097 DDX11L8A8MPP1 907 aa17.26■□□□□ 0.35
UBE3A-204ENST00000438097 CPLX2Q6PUV4 134 aaKnown RBP17.26■□□□□ 0.35
UBE3A-204ENST00000438097 TNIKQ9UKE5 1360 aa17.25■□□□□ 0.35
UBE3A-204ENST00000438097 APBB1O00213 710 aa17.25■□□□□ 0.35
UBE3A-204ENST00000438097 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
UBE3A-204ENST00000438097 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.352e-7■■■■□ 25
UBE3A-204ENST00000438097 ROCK1Q13464 1354 aa17.23■□□□□ 0.35
UBE3A-204ENST00000438097 GOLGA6L3A6NEY3 463 aa17.23■□□□□ 0.35
UBE3A-204ENST00000438097 SPRYD3Q8NCJ5 442 aa17.23■□□□□ 0.35
UBE3A-204ENST00000438097 TOMM22Q9NS69 142 aa17.23■□□□□ 0.35
UBE3A-204ENST00000438097 CCER2I3L3R5 266 aa17.23■□□□□ 0.35
UBE3A-204ENST00000438097 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
UBE3A-204ENST00000438097 TRIM29Q14134 588 aa17.23■□□□□ 0.35
UBE3A-204ENST00000438097 ODF2Q5BJF6 829 aa17.22■□□□□ 0.35
UBE3A-204ENST00000438097 MYO6Q9UM54 1294 aa17.22■□□□□ 0.35
UBE3A-204ENST00000438097 FAM184AQ8NB25 1140 aa17.21■□□□□ 0.35
UBE3A-204ENST00000438097 ANKRD30AQ9BXX3 1397 aa17.21■□□□□ 0.35
UBE3A-204ENST00000438097 AMER1Q5JTC6 1135 aaPredicted RBP17.21■□□□□ 0.34
UBE3A-204ENST00000438097 STK26Q9P289 416 aa17.2■□□□□ 0.34
UBE3A-204ENST00000438097 AMPHP49418 695 aa17.2■□□□□ 0.34
UBE3A-204ENST00000438097 SETD5Q9C0A6 1442 aa17.2■□□□□ 0.34
UBE3A-204ENST00000438097 TEX35Q5T0J7 233 aa17.19■□□□□ 0.34
UBE3A-204ENST00000438097 C1orf141Q5JVX7 400 aa17.19■□□□□ 0.34
UBE3A-204ENST00000438097 VPS37DQ86XT2 251 aa17.19■□□□□ 0.34
UBE3A-204ENST00000438097 NEXNQ0ZGT2 675 aa17.19■□□□□ 0.34
UBE3A-204ENST00000438097 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■■■□□ 15.5
UBE3A-204ENST00000438097 RTN4Q9NQC3 1192 aaKnown RBP17.19■□□□□ 0.34
UBE3A-204ENST00000438097 R3HCC1Q9Y3T6 440 aaKnown RBP17.18■□□□□ 0.34
UBE3A-204ENST00000438097 NGDNQ8NEJ9 315 aaKnown RBP17.18■□□□□ 0.34
UBE3A-204ENST00000438097 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.18■□□□□ 0.348e-7■■■■■ 64.5
UBE3A-204ENST00000438097 RCAN3Q9UKA8 241 aa17.18■□□□□ 0.34
UBE3A-204ENST00000438097 AK7Q96M32 723 aa17.17■□□□□ 0.34
UBE3A-204ENST00000438097 RUFY2Q8WXA3 655 aa17.17■□□□□ 0.34
UBE3A-204ENST00000438097 SKOR2Q2VWA4 1001 aaPredicted RBP17.17■□□□□ 0.34
UBE3A-204ENST00000438097 WWC2Q6AWC2 1192 aa17.17■□□□□ 0.34
UBE3A-204ENST00000438097 BECN2A8MW95 431 aa17.16■□□□□ 0.34
UBE3A-204ENST00000438097 CT47A1Q5JQC4 288 aaPredicted RBP17.16■□□□□ 0.34
UBE3A-204ENST00000438097 EVA1CP58658 441 aa17.16■□□□□ 0.34
UBE3A-204ENST00000438097 RUFY1Q96T51 708 aa17.15■□□□□ 0.34
UBE3A-204ENST00000438097 B4GALNT3Q6L9W6 998 aa17.15■□□□□ 0.34
UBE3A-204ENST00000438097 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
UBE3A-204ENST00000438097 AEBP2Q6ZN18 517 aaPredicted RBP17.14■□□□□ 0.33
UBE3A-204ENST00000438097 CCDC173Q0VFZ6 552 aa17.14■□□□□ 0.33
UBE3A-204ENST00000438097 ZRSR2Q15696 482 aaKnown RBP17.14■□□□□ 0.33
UBE3A-204ENST00000438097 EPS15P42566 896 aa17.14■□□□□ 0.33
UBE3A-204ENST00000438097 CUX2O14529 1486 aa17.14■□□□□ 0.33
UBE3A-204ENST00000438097 ERICH2A1L162 156 aa17.14■□□□□ 0.33
UBE3A-204ENST00000438097 ACBD3Q9H3P7 528 aa17.14■□□□□ 0.33
UBE3A-204ENST00000438097 RSPH4AQ5TD94 716 aa17.13■□□□□ 0.33
UBE3A-204ENST00000438097 PCMTD1Q96MG8 357 aaPredicted RBP17.13■□□□□ 0.33
UBE3A-204ENST00000438097 MEX3CQ5U5Q3 659 aaKnown RBP17.13■□□□□ 0.33
UBE3A-204ENST00000438097 GGT6Q6P531 493 aa17.13■□□□□ 0.33
UBE3A-204ENST00000438097 NOM1Q5C9Z4 860 aaKnown RBP17.13■□□□□ 0.33
UBE3A-204ENST00000438097 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
UBE3A-204ENST00000438097 TRDNQ13061 729 aa17.12■□□□□ 0.33
UBE3A-204ENST00000438097 TTC5Q8N0Z6 440 aa17.12■□□□□ 0.33
UBE3A-204ENST00000438097 FOXD1Q16676 465 aa17.11■□□□□ 0.33
UBE3A-204ENST00000438097 SLC4A10Q6U841 1118 aa17.11■□□□□ 0.33
UBE3A-204ENST00000438097 GZF1Q9H116 711 aaPredicted RBP17.11■□□□□ 0.33
UBE3A-204ENST00000438097 CENPJQ9HC77 1338 aaPredicted RBP17.11■□□□□ 0.33
UBE3A-204ENST00000438097 RNF20Q5VTR2 975 aa17.11■□□□□ 0.33
UBE3A-204ENST00000438097 BRMS1Q9HCU9 246 aa17.1■□□□□ 0.33
UBE3A-204ENST00000438097 CCAR2Q8N163 923 aaKnown RBP17.1■□□□□ 0.33
UBE3A-204ENST00000438097 REC8O95072 547 aa17.09■□□□□ 0.33
UBE3A-204ENST00000438097 ZKSCAN1P17029 563 aaPredicted RBP17.09■□□□□ 0.33
UBE3A-204ENST00000438097 MFAP1P55081 439 aaKnown RBP17.09■□□□□ 0.33
UBE3A-204ENST00000438097 EFCAB2Q5VUJ9 269 aa17.08■□□□□ 0.33
UBE3A-204ENST00000438097 DIAPH3Q9NSV4 1193 aa17.08■□□□□ 0.33
UBE3A-204ENST00000438097 CARMIL1Q5VZK9 1371 aa17.08■□□□□ 0.32
UBE3A-204ENST00000438097 CGNL1Q0VF96 1302 aa17.07■□□□□ 0.32
UBE3A-204ENST00000438097 PDE3BQ13370 1112 aa17.07■□□□□ 0.32
UBE3A-204ENST00000438097 DDX58O95786 925 aaKnown RBP17.07■□□□□ 0.32
UBE3A-204ENST00000438097 CPLX1O14810 134 aa17.06■□□□□ 0.32
UBE3A-204ENST00000438097 NAT10Q9H0A0 1025 aaKnown RBP17.06■□□□□ 0.32
UBE3A-204ENST00000438097 NUP155O75694 1391 aa17.06■□□□□ 0.32
UBE3A-204ENST00000438097 SAFBQ15424 915 aaKnown RBP eCLIP17.06■□□□□ 0.32
UBE3A-204ENST00000438097 DEKP35659 375 aaKnown RBP17.06■□□□□ 0.32
UBE3A-204ENST00000438097 SLKQ9H2G2 1235 aaPredicted RBP17.06■□□□□ 0.32
UBE3A-204ENST00000438097 KIF15Q9NS87 1388 aa17.06■□□□□ 0.32
UBE3A-204ENST00000438097 XBP1P17861 261 aa17.05■□□□□ 0.32
UBE3A-204ENST00000438097 MCTP1Q6DN14 999 aa17.05■□□□□ 0.32
UBE3A-204ENST00000438097 MSH5O43196 834 aa17.04■□□□□ 0.32
UBE3A-204ENST00000438097 C9orf78Q9NZ63 289 aaPredicted RBP17.04■□□□□ 0.32
UBE3A-204ENST00000438097 RAD21O60216 631 aa17.04■□□□□ 0.32
UBE3A-204ENST00000438097 WASHC2CQ9Y4E1 1318 aa17.03■□□□□ 0.32
UBE3A-204ENST00000438097 DHX16O60231 1041 aaKnown RBP17.03■□□□□ 0.32
UBE3A-204ENST00000438097 CCDC191Q8NCU4 936 aa17.03■□□□□ 0.32
UBE3A-204ENST00000438097 HMGB2P26583 209 aaKnown RBP17.02■□□□□ 0.32
UBE3A-204ENST00000438097 ARGLU1Q9NWB6 273 aaPredicted RBP17.02■□□□□ 0.32
UBE3A-204ENST00000438097 RBM33Q96EV2 1170 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms