RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 VGFO15240 615 aaPredicted RBP6.97□□□□□ -1.29
CAST-209ENST00000437034 RALBP1Q15311 655 aa6.97□□□□□ -1.29
CAST-209ENST00000437034 NBPF1Q3BBV0 1214 aa6.97□□□□□ -1.29
CAST-209ENST00000437034 NBPF11Q86T75 865 aa6.97□□□□□ -1.29
CAST-209ENST00000437034 EVI5LQ96CN4 794 aa6.97□□□□□ -1.29
CAST-209ENST00000437034 ARID4AP29374 1257 aaPredicted RBP6.97□□□□□ -1.29
CAST-209ENST00000437034 RETREG2Q8NC44 543 aa6.97□□□□□ -1.29
CAST-209ENST00000437034 RGL2O15211 777 aa6.96□□□□□ -1.29
CAST-209ENST00000437034 ECM2O94769 699 aaPredicted RBP6.96□□□□□ -1.29
CAST-209ENST00000437034 TSHZ1Q6ZSZ6 1077 aa6.96□□□□□ -1.29
CAST-209ENST00000437034 CHGAP10645 457 aaKnown RBP6.95□□□□□ -1.3
CAST-209ENST00000437034 IRF5Q13568 498 aa6.95□□□□□ -1.3
CAST-209ENST00000437034 RGL3Q3MIN7 710 aa6.95□□□□□ -1.3
CAST-209ENST00000437034 HSP90AA1P07900 732 aaKnown RBP6.95□□□□□ -1.3
CAST-209ENST00000437034 MICAL1Q8TDZ2 1067 aa6.95□□□□□ -1.3
CAST-209ENST00000437034 BIVM-ERCC5R4GMW8 1640 aa6.95□□□□□ -1.3
CAST-209ENST00000437034 RIOK3O14730 519 aaKnown RBP6.95□□□□□ -1.3
CAST-209ENST00000437034 EGFL6Q8IUX8 553 aa6.94□□□□□ -1.3
CAST-209ENST00000437034 WDR97A6NE52 1622 aa6.94□□□□□ -1.3
CAST-209ENST00000437034 NBPF20Q3BBV1 942 aa6.94□□□□□ -1.3
CAST-209ENST00000437034 NME8Q8N427 588 aa6.94□□□□□ -1.3
CAST-209ENST00000437034 CREBRFQ8IUR6 639 aa6.94□□□□□ -1.3
CAST-209ENST00000437034 SPATA32Q96LK8 384 aa6.94□□□□□ -1.3
CAST-209ENST00000437034 TMEM51Q9NW97 253 aa6.94□□□□□ -1.3
CAST-209ENST00000437034 PNMA2Q9UL42 364 aa6.94□□□□□ -1.3
CAST-209ENST00000437034 KIF4AO95239 1232 aa6.93□□□□□ -1.3
CAST-209ENST00000437034 SUGT1Q9Y2Z0 365 aa6.93□□□□□ -1.3
CAST-209ENST00000437034 ANP32CO43423 234 aa6.93□□□□□ -1.3
CAST-209ENST00000437034 CLUAP1Q96AJ1 413 aa6.93□□□□□ -1.3
CAST-209ENST00000437034 ZBTB12Q9Y330 459 aaPredicted RBP6.93□□□□□ -1.3
CAST-209ENST00000437034 RBM19Q9Y4C8 960 aaKnown RBP6.93□□□□□ -1.3
CAST-209ENST00000437034 DHX16O60231 1041 aaKnown RBP6.92□□□□□ -1.3
CAST-209ENST00000437034 VASPP50552 380 aaPredicted RBP6.92□□□□□ -1.3
CAST-209ENST00000437034 MYBPC2Q14324 1141 aa6.92□□□□□ -1.3
CAST-209ENST00000437034 ATAD2BQ9ULI0 1458 aa6.92□□□□□ -1.3
CAST-209ENST00000437034 PSEN1P49768 467 aa6.92□□□□□ -1.3
CAST-209ENST00000437034 CCER1Q8TC90 406 aaPredicted RBP6.92□□□□□ -1.3
CAST-209ENST00000437034 TESPA1A2RU30 521 aaPredicted RBP6.92□□□□□ -1.3
CAST-209ENST00000437034 CCDC96Q2M329 555 aa6.92□□□□□ -1.3
CAST-209ENST00000437034 ZNF513Q8N8E2 541 aaPredicted RBP6.92□□□□□ -1.3
CAST-209ENST00000437034 TRIM44Q96DX7 344 aaPredicted RBP6.92□□□□□ -1.3
CAST-209ENST00000437034 TMX4Q9H1E5 349 aaPredicted RBP6.92□□□□□ -1.3
CAST-209ENST00000437034 IRF6O14896 467 aa6.91□□□□□ -1.3
CAST-209ENST00000437034 ZNF662Q6ZS27 426 aa6.91□□□□□ -1.3
CAST-209ENST00000437034 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.91□□□□□ -1.3
CAST-209ENST00000437034 CECR2Q9BXF3 1484 aa6.91□□□□□ -1.3
CAST-209ENST00000437034 UNCXA6NJT0 531 aa6.91□□□□□ -1.3
CAST-209ENST00000437034 CCDC181Q5TID7 509 aa6.91□□□□□ -1.3
CAST-209ENST00000437034 P3H3Q8IVL6 736 aa6.91□□□□□ -1.3
CAST-209ENST00000437034 MTA3Q9BTC8 594 aa6.91□□□□□ -1.3
CAST-209ENST00000437034 CARD10Q9BWT7 1032 aa6.91□□□□□ -1.3
CAST-209ENST00000437034 DMRT2Q9Y5R5 561 aa6.91□□□□□ -1.3
CAST-209ENST00000437034 MAP4K4O95819 1239 aaPredicted RBP6.9□□□□□ -1.3
CAST-209ENST00000437034 GET4Q7L5D6 327 aaPredicted RBP6.9□□□□□ -1.3
CAST-209ENST00000437034 RAB11FIP3O75154 756 aa6.89□□□□□ -1.31
CAST-209ENST00000437034 SSFA2P28290 1259 aa6.89□□□□□ -1.31
CAST-209ENST00000437034 DNTTIP2Q5QJE6 756 aaKnown RBP6.89□□□□□ -1.31
CAST-209ENST00000437034 CEP120Q8N960 986 aa6.89□□□□□ -1.31
CAST-209ENST00000437034 SIRT1Q96EB6 747 aa6.89□□□□□ -1.31
CAST-209ENST00000437034 PAX3P23760 479 aa6.89□□□□□ -1.31
CAST-209ENST00000437034 CC2D2AQ9P2K1 1620 aa6.89□□□□□ -1.31
CAST-209ENST00000437034 KRBA2Q6ZNG9 492 aa6.89□□□□□ -1.31
CAST-209ENST00000437034 HSP90AB3PQ58FF7 597 aa6.88□□□□□ -1.31
CAST-209ENST00000437034 ATL2Q8NHH9 583 aa6.88□□□□□ -1.31
CAST-209ENST00000437034 SH3BP5O60239 455 aa6.88□□□□□ -1.31
CAST-209ENST00000437034 ZFYVE27Q5T4F4 411 aa6.88□□□□□ -1.31
CAST-209ENST00000437034 OTUD6BQ8N6M0 293 aa6.88□□□□□ -1.31
CAST-209ENST00000437034 TRIM41Q8WV44 630 aa6.88□□□□□ -1.31
CAST-209ENST00000437034 ZNF777Q9ULD5 760 aaPredicted RBP6.88□□□□□ -1.31
CAST-209ENST00000437034 RPS6KL1Q9Y6S9 549 aa6.88□□□□□ -1.31
CAST-209ENST00000437034 GOLGA6CA6NDK9 693 aa6.88□□□□□ -1.31
CAST-209ENST00000437034 GOLGA6BA6NDN3 693 aa6.88□□□□□ -1.31
CAST-209ENST00000437034 GOLIM4O00461 696 aa6.88□□□□□ -1.31
CAST-209ENST00000437034 TCERG1O14776 1098 aaKnown RBP6.88□□□□□ -1.31
CAST-209ENST00000437034 GOLGA6DP0CG33 693 aa6.88□□□□□ -1.31
CAST-209ENST00000437034 VTI1AQ96AJ9 217 aa6.88□□□□□ -1.31
CAST-209ENST00000437034 GOLGA6AQ9NYA3 693 aa6.88□□□□□ -1.31
CAST-209ENST00000437034 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.87□□□□□ -1.317e-19■■■■■ 104.3
CAST-209ENST00000437034 NGEFQ8N5V2 710 aa6.87□□□□□ -1.31
CAST-209ENST00000437034 ZNF500O60304 480 aaPredicted RBP6.86□□□□□ -1.31
CAST-209ENST00000437034 NBPF9Q3BBW0 867 aa6.86□□□□□ -1.31
CAST-209ENST00000437034 ZNF280DQ6N043 979 aa6.86□□□□□ -1.31
CAST-209ENST00000437034 HIRIP3Q9BW71 556 aaPredicted RBP6.86□□□□□ -1.31
CAST-209ENST00000437034 SUPT16HQ9Y5B9 1047 aaKnown RBP6.86□□□□□ -1.31
CAST-209ENST00000437034 ZC3H15Q8WU90 426 aaKnown RBP6.86□□□□□ -1.31
CAST-209ENST00000437034 LONRF3Q496Y0 759 aa6.86□□□□□ -1.31
CAST-209ENST00000437034 LAMC3Q9Y6N6 1575 aa6.86□□□□□ -1.31
CAST-209ENST00000437034 ERBB3P21860 1342 aa6.86□□□□□ -1.31
CAST-209ENST00000437034 NRDCO43847 1150 aa6.85□□□□□ -1.31
CAST-209ENST00000437034 PPFIA4O75335 1185 aa6.85□□□□□ -1.31
CAST-209ENST00000437034 RHBDL3P58872 404 aa6.85□□□□□ -1.31
CAST-209ENST00000437034 EPB41L2O43491 1005 aaKnown RBP6.85□□□□□ -1.31
CAST-209ENST00000437034 KLHL42Q9P2K6 505 aa6.85□□□□□ -1.31
CAST-209ENST00000437034 SSR1P43307 286 aaKnown RBP6.84□□□□□ -1.31
CAST-209ENST00000437034 HDAC1Q13547 482 aaPredicted RBP6.84□□□□□ -1.31
CAST-209ENST00000437034 PIK3R5Q8WYR1 880 aa6.84□□□□□ -1.31
CAST-209ENST00000437034 SCP2P22307 547 aa6.83□□□□□ -1.32
CAST-209ENST00000437034 WDR78Q5VTH9 848 aa6.83□□□□□ -1.32
CAST-209ENST00000437034 C11orf95C9JLR9 678 aaPredicted RBP6.83□□□□□ -1.32
CAST-209ENST00000437034 DNAJC14Q6Y2X3 702 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms