RNA–Protein interactions for RNA: ENST00000436722.1

LINC00411-201, long intergenic non-protein coding RNA 411, humanhuman

TSL 3 BASIC

Gene LINC00411, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00411-201ENST00000436722 LAPTM4BQ86VI4 370 aa11.66□□□□□ -0.54
LINC00411-201ENST00000436722 NYAP1Q6ZVC0 841 aa11.64□□□□□ -0.55
LINC00411-201ENST00000436722 KCNC4Q03721 635 aa11.63□□□□□ -0.55
LINC00411-201ENST00000436722 ZFRQ96KR1 1074 aaKnown RBP11.63□□□□□ -0.55
LINC00411-201ENST00000436722 WBP1LQ9NX94 342 aa11.63□□□□□ -0.55
LINC00411-201ENST00000436722 KIAA1468Q9P260 1216 aa11.63□□□□□ -0.55
LINC00411-201ENST00000436722 EMILIN3Q9NT22 766 aa11.62□□□□□ -0.55
LINC00411-201ENST00000436722 TYW1BQ6NUM6 668 aa11.61□□□□□ -0.55
LINC00411-201ENST00000436722 FBXW7Q969H0 707 aa11.61□□□□□ -0.55
LINC00411-201ENST00000436722 MFSD10Q14728 455 aa11.6□□□□□ -0.55
LINC00411-201ENST00000436722 PHF14O94880 888 aa11.59□□□□□ -0.55
LINC00411-201ENST00000436722 ONECUT3O60422 494 aaPredicted RBP11.57□□□□□ -0.56
LINC00411-201ENST00000436722 SEPT9Q9UHD8 586 aaPredicted RBP11.57□□□□□ -0.56
LINC00411-201ENST00000436722 GTPBP6O43824 516 aaPredicted RBP11.56□□□□□ -0.56
LINC00411-201ENST00000436722 LAPTM4AQ15012 233 aa11.54□□□□□ -0.56
LINC00411-201ENST00000436722 C6orf132Q5T0Z8 1188 aa11.53□□□□□ -0.56
LINC00411-201ENST00000436722 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.52□□□□□ -0.57
LINC00411-201ENST00000436722 TSR3Q9UJK0 312 aaKnown RBP11.52□□□□□ -0.57
LINC00411-201ENST00000436722 TRIM6-TRIM34B2RNG4 842 aa11.51□□□□□ -0.57
LINC00411-201ENST00000436722 FAM98CQ17RN3 349 aaKnown RBP11.51□□□□□ -0.57
LINC00411-201ENST00000436722 HPS5Q9UPZ3 1129 aa11.51□□□□□ -0.57
LINC00411-201ENST00000436722 GFRA3O60609 400 aa11.5□□□□□ -0.57
LINC00411-201ENST00000436722 LRCH3Q96II8 777 aa11.5□□□□□ -0.57
LINC00411-201ENST00000436722 EPAS1Q99814 870 aa11.5□□□□□ -0.57
LINC00411-201ENST00000436722 LCE2BO14633 110 aa11.49□□□□□ -0.57
LINC00411-201ENST00000436722 TRAF7Q6Q0C0 670 aa11.49□□□□□ -0.57
LINC00411-201ENST00000436722 RBM33Q96EV2 1170 aaKnown RBP11.46□□□□□ -0.57
LINC00411-201ENST00000436722 PPP4CP60510 307 aa11.42□□□□□ -0.58
LINC00411-201ENST00000436722 CADPS2Q86UW7 1296 aa11.42□□□□□ -0.58
LINC00411-201ENST00000436722 DPYSL4O14531 572 aa11.41□□□□□ -0.58
LINC00411-201ENST00000436722 PRKD2Q9BZL6 878 aa11.41□□□□□ -0.58
LINC00411-201ENST00000436722 PACS2Q86VP3 889 aa11.4□□□□□ -0.58
LINC00411-201ENST00000436722 TJAP1Q5JTD0 557 aa11.39□□□□□ -0.59
LINC00411-201ENST00000436722 DDX12PQ92771 950 aa11.39□□□□□ -0.59
LINC00411-201ENST00000436722 CAMK2BQ13554 666 aa11.38□□□□□ -0.59
LINC00411-201ENST00000436722 TSKSQ9UJT2 592 aa11.38□□□□□ -0.59
LINC00411-201ENST00000436722 NRG2O14511 850 aaPredicted RBP11.37□□□□□ -0.59
LINC00411-201ENST00000436722 PPP1R18Q6NYC8 613 aa11.34□□□□□ -0.59
LINC00411-201ENST00000436722 TSR1Q2NL82 804 aaKnown RBP11.33□□□□□ -0.6
LINC00411-201ENST00000436722 SAMD7Q7Z3H4 446 aa11.33□□□□□ -0.6
LINC00411-201ENST00000436722 MAP3K7O43318 606 aa11.32□□□□□ -0.6
LINC00411-201ENST00000436722 EN1Q05925 392 aaPredicted RBP11.32□□□□□ -0.6
LINC00411-201ENST00000436722 MTRQ99707 1265 aa11.32□□□□□ -0.6
LINC00411-201ENST00000436722 IL21Q9HBE4 155 aa11.32□□□□□ -0.6
LINC00411-201ENST00000436722 V9GY48 417 aaPredicted RBP11.32□□□□□ -0.6
LINC00411-201ENST00000436722 SMAPO00193 183 aa11.31□□□□□ -0.6
LINC00411-201ENST00000436722 NBR1Q14596 966 aa11.31□□□□□ -0.6
LINC00411-201ENST00000436722 ZNF787Q6DD87 383 aa11.29□□□□□ -0.6
LINC00411-201ENST00000436722 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
LINC00411-201ENST00000436722 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.28□□□□□ -0.6
LINC00411-201ENST00000436722 ZNF516Q92618 1163 aa11.27□□□□□ -0.61
LINC00411-201ENST00000436722 DCAF8L2P0C7V8 631 aa11.25□□□□□ -0.61
LINC00411-201ENST00000436722 PRSS12P56730 875 aa11.25□□□□□ -0.61
LINC00411-201ENST00000436722 FAM198AQ9UFP1 575 aa11.25□□□□□ -0.61
LINC00411-201ENST00000436722 PDZRN3Q9UPQ7 1066 aa11.25□□□□□ -0.61
LINC00411-201ENST00000436722 TATDN2Q93075 761 aa11.23□□□□□ -0.61
LINC00411-201ENST00000436722 PNMA3Q9UL41 463 aa11.23□□□□□ -0.61
LINC00411-201ENST00000436722 C3orf80F5H4A9 247 aa11.22□□□□□ -0.61
LINC00411-201ENST00000436722 RNF40O75150 1001 aa11.21□□□□□ -0.61
LINC00411-201ENST00000436722 PDIA6Q15084 440 aa11.21□□□□□ -0.61
LINC00411-201ENST00000436722 NKX2-3Q8TAU0 364 aa11.21□□□□□ -0.61
LINC00411-201ENST00000436722 CERKQ8TCT0 537 aa11.21□□□□□ -0.61
LINC00411-201ENST00000436722 NBPF26B4DH59 902 aa11.2□□□□□ -0.62
LINC00411-201ENST00000436722 APLP1P51693 650 aa11.2□□□□□ -0.62
LINC00411-201ENST00000436722 HDGFP51858 240 aaKnown RBP11.2□□□□□ -0.62
LINC00411-201ENST00000436722 ZNF775Q96BV0 537 aaPredicted RBP11.19□□□□□ -0.62
LINC00411-201ENST00000436722 SPDYE16A6NNV3 312 aaPredicted RBP11.18□□□□□ -0.62
LINC00411-201ENST00000436722 GGCXP38435 758 aa11.17□□□□□ -0.62
LINC00411-201ENST00000436722 PRIM1P49642 420 aaKnown RBP11.16□□□□□ -0.62
LINC00411-201ENST00000436722 NUDT18Q6ZVK8 323 aa11.16□□□□□ -0.62
LINC00411-201ENST00000436722 GRXCR2A6NFK2 248 aa11.13□□□□□ -0.63
LINC00411-201ENST00000436722 COPS2P61201 443 aa11.13□□□□□ -0.63
LINC00411-201ENST00000436722 TMUB1Q9BVT8 246 aa11.12□□□□□ -0.63
LINC00411-201ENST00000436722 NECTIN2Q92692 538 aa11.1□□□□□ -0.63
LINC00411-201ENST00000436722 CDHR5Q9HBB8 845 aa11.09□□□□□ -0.63
LINC00411-201ENST00000436722 SWT1Q5T5J6 900 aaKnown RBP11.08□□□□□ -0.64
LINC00411-201ENST00000436722 ZPR1O75312 459 aa11.07□□□□□ -0.64
LINC00411-201ENST00000436722 SLF2Q8IX21 1173 aa11.07□□□□□ -0.64
LINC00411-201ENST00000436722 RBM27Q9P2N5 1060 aaKnown RBP11.07□□□□□ -0.64
LINC00411-201ENST00000436722 TRIM67Q6ZTA4 783 aa11.06□□□□□ -0.64
LINC00411-201ENST00000436722 SLC19A1P41440 591 aa11.05□□□□□ -0.64
LINC00411-201ENST00000436722 OSBPP22059 807 aa11.04□□□□□ -0.64
LINC00411-201ENST00000436722 PKDCCQ504Y2 493 aa11.04□□□□□ -0.64
LINC00411-201ENST00000436722 RNF223E7ERA6 249 aa11.02□□□□□ -0.65
LINC00411-201ENST00000436722 SLC4A3P48751 1232 aa11.02□□□□□ -0.65
LINC00411-201ENST00000436722 MYT1Q01538 1121 aa11.02□□□□□ -0.65
LINC00411-201ENST00000436722 E2F4Q16254 413 aa11.02□□□□□ -0.65
LINC00411-201ENST00000436722 DGAT1O75907 488 aa11.01□□□□□ -0.65
LINC00411-201ENST00000436722 PADI6Q6TGC4 694 aa11.01□□□□□ -0.65
LINC00411-201ENST00000436722 TTC13Q8NBP0 860 aa11.01□□□□□ -0.65
LINC00411-201ENST00000436722 EMID1Q96A84 441 aaPredicted RBP11.01□□□□□ -0.65
LINC00411-201ENST00000436722 POTECB2RU33 542 aa11□□□□□ -0.65
LINC00411-201ENST00000436722 ARIH1Q9Y4X5 557 aaPredicted RBP11□□□□□ -0.65
LINC00411-201ENST00000436722 PCDHB3Q9Y5E6 796 aa11□□□□□ -0.65
LINC00411-201ENST00000436722 PRR14Q9BWN1 585 aa10.99□□□□□ -0.65
LINC00411-201ENST00000436722 SPRYD7Q5W111 196 aa10.98□□□□□ -0.65
LINC00411-201ENST00000436722 ZNF598Q86UK7 904 aaKnown RBP10.98□□□□□ -0.65
LINC00411-201ENST00000436722 BLOC1S3Q6QNY0 202 aa10.97□□□□□ -0.65
LINC00411-201ENST00000436722 NPDC1Q9NQX5 325 aaPredicted RBP10.97□□□□□ -0.65
LINC00411-201ENST00000436722 PRR20EP86478 221 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms