RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 FOXK1P85037 733 aa6.74□□□□□ -1.33
PTPN12-206ENST00000435495 PTGDRQ13258 359 aa6.74□□□□□ -1.33
PTPN12-206ENST00000435495 PAK3O75914 559 aaPredicted RBP6.73□□□□□ -1.33
PTPN12-206ENST00000435495 PCMTD1Q96MG8 357 aaPredicted RBP6.73□□□□□ -1.33
PTPN12-206ENST00000435495 MAP3K9P80192 1104 aa6.72□□□□□ -1.33
PTPN12-206ENST00000435495 SPDYE16A6NNV3 312 aaPredicted RBP6.72□□□□□ -1.33
PTPN12-206ENST00000435495 BRD2P25440 801 aaKnown RBP6.72□□□□□ -1.33
PTPN12-206ENST00000435495 RGS22Q8NE09 1264 aa6.71□□□□□ -1.34
PTPN12-206ENST00000435495 GZF1Q9H116 711 aaPredicted RBP6.71□□□□□ -1.34
PTPN12-206ENST00000435495 GOPCQ9HD26 462 aa6.71□□□□□ -1.34
PTPN12-206ENST00000435495 COG6Q9Y2V7 657 aa6.71□□□□□ -1.34
PTPN12-206ENST00000435495 TTLL13PA6NNM8 815 aa6.71□□□□□ -1.34
PTPN12-206ENST00000435495 TMC2Q8TDI7 906 aa6.71□□□□□ -1.34
PTPN12-206ENST00000435495 BEGAINQ9BUH8 593 aa6.71□□□□□ -1.34
PTPN12-206ENST00000435495 PLSCR2Q9NRY7 297 aa6.71□□□□□ -1.34
PTPN12-206ENST00000435495 CCDC97Q96F63 343 aaPredicted RBP6.7□□□□□ -1.34
PTPN12-206ENST00000435495 FCHSD2O94868 740 aa6.7□□□□□ -1.34
PTPN12-206ENST00000435495 CD44P16070 742 aaKnown RBP6.7□□□□□ -1.34
PTPN12-206ENST00000435495 RBM25P49756 843 aaKnown RBP6.7□□□□□ -1.34
PTPN12-206ENST00000435495 TMEM92Q6UXU6 159 aa6.7□□□□□ -1.34
PTPN12-206ENST00000435495 ILDR1Q86SU0 546 aaPredicted RBP6.69□□□□□ -1.34
PTPN12-206ENST00000435495 GDPD2Q9HCC8 539 aa6.69□□□□□ -1.34
PTPN12-206ENST00000435495 POM121CA8CG34 1229 aa6.69□□□□□ -1.34
PTPN12-206ENST00000435495 TSR1Q2NL82 804 aaKnown RBP6.69□□□□□ -1.34
PTPN12-206ENST00000435495 PDCD7Q8N8D1 485 aaKnown RBP6.69□□□□□ -1.34
PTPN12-206ENST00000435495 TRIM35Q9UPQ4 493 aa6.69□□□□□ -1.34
PTPN12-206ENST00000435495 SH3D19Q5HYK7 790 aa6.68□□□□□ -1.34
PTPN12-206ENST00000435495 NPDC1Q9NQX5 325 aaPredicted RBP6.68□□□□□ -1.34
PTPN12-206ENST00000435495 FXR2P51116 673 aaKnown RBP eCLIP6.67□□□□□ -1.34
PTPN12-206ENST00000435495 SSTR3P32745 418 aaPredicted RBP6.67□□□□□ -1.34
PTPN12-206ENST00000435495 MFAP1P55081 439 aaKnown RBP6.67□□□□□ -1.34
PTPN12-206ENST00000435495 KIF3CO14782 793 aa6.66□□□□□ -1.34
PTPN12-206ENST00000435495 RBM33Q96EV2 1170 aaKnown RBP6.66□□□□□ -1.34
PTPN12-206ENST00000435495 TRAIPQ9BWF2 469 aa6.66□□□□□ -1.34
PTPN12-206ENST00000435495 ZNF330Q9Y3S2 320 aaPredicted RBP6.66□□□□□ -1.34
PTPN12-206ENST00000435495 TMCO4Q5TGY1 634 aa6.66□□□□□ -1.34
PTPN12-206ENST00000435495 MYSM1Q5VVJ2 828 aa6.66□□□□□ -1.34
PTPN12-206ENST00000435495 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTPN12-206ENST00000435495 BMP2KQ9NSY1 1161 aaPredicted RBP6.66□□□□□ -1.34
PTPN12-206ENST00000435495 PIP4P2Q8N4L2 257 aa6.65□□□□□ -1.34
PTPN12-206ENST00000435495 TMUB1Q9BVT8 246 aa6.65□□□□□ -1.35
PTPN12-206ENST00000435495 GPCPD1Q9NPB8 672 aa6.64□□□□□ -1.35
PTPN12-206ENST00000435495 RFX1P22670 979 aa6.64□□□□□ -1.35
PTPN12-206ENST00000435495 SKIV2LQ15477 1246 aaKnown RBP6.64□□□□□ -1.35
PTPN12-206ENST00000435495 CSPP1Q1MSJ5 1256 aa6.64□□□□□ -1.35
PTPN12-206ENST00000435495 MTMR14Q8NCE2 650 aa6.64□□□□□ -1.35
PTPN12-206ENST00000435495 SERPINA10Q9UK55 444 aa6.64□□□□□ -1.35
PTPN12-206ENST00000435495 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.63□□□□□ -1.35
PTPN12-206ENST00000435495 LIMD1Q9UGP4 676 aa6.63□□□□□ -1.35
PTPN12-206ENST00000435495 FAM9AQ8IZU1 332 aaPredicted RBP6.62□□□□□ -1.35
PTPN12-206ENST00000435495 EVI5O60447 810 aa6.62□□□□□ -1.35
PTPN12-206ENST00000435495 PDE4CQ08493 712 aa6.62□□□□□ -1.35
PTPN12-206ENST00000435495 MAP3K7O43318 606 aa6.61□□□□□ -1.35
PTPN12-206ENST00000435495 RFC5P40937 340 aa6.61□□□□□ -1.35
PTPN12-206ENST00000435495 FBXW7Q969H0 707 aa6.61□□□□□ -1.35
PTPN12-206ENST00000435495 POLR3GLQ9BT43 218 aa6.61□□□□□ -1.35
PTPN12-206ENST00000435495 TBC1D2BQ9UPU7 963 aa6.61□□□□□ -1.35
PTPN12-206ENST00000435495 GALR2O43603 387 aaPredicted RBP6.61□□□□□ -1.35
PTPN12-206ENST00000435495 TBC1D12O60347 775 aa6.61□□□□□ -1.35
PTPN12-206ENST00000435495 ABL2P42684 1182 aa6.61□□□□□ -1.35
PTPN12-206ENST00000435495 GLMNQ92990 594 aa6.61□□□□□ -1.35
PTPN12-206ENST00000435495 CLCN1P35523 988 aa6.6□□□□□ -1.35
PTPN12-206ENST00000435495 FAM217BQ9NTX9 383 aaPredicted RBP6.6□□□□□ -1.35
PTPN12-206ENST00000435495 QPCTQ16769 361 aa6.6□□□□□ -1.35
PTPN12-206ENST00000435495 METTL3Q86U44 580 aaKnown RBP6.6□□□□□ -1.35
PTPN12-206ENST00000435495 ADAMTS19Q8TE59 1207 aa6.6□□□□□ -1.35
PTPN12-206ENST00000435495 CLK2P49760 499 aaKnown RBP6.59□□□□□ -1.35
PTPN12-206ENST00000435495 CALR3Q96L12 384 aaKnown RBP6.59□□□□□ -1.35
PTPN12-206ENST00000435495 BOLA1Q9Y3E2 137 aa6.58□□□□□ -1.36
PTPN12-206ENST00000435495 SPDYE5A6NIY4 337 aa6.57□□□□□ -1.36
PTPN12-206ENST00000435495 PTGER2P43116 358 aa6.57□□□□□ -1.36
PTPN12-206ENST00000435495 TAF7LQ5H9L4 462 aa6.57□□□□□ -1.36
PTPN12-206ENST00000435495 TBC1D2Q9BYX2 928 aa6.57□□□□□ -1.36
PTPN12-206ENST00000435495 CHRDL2Q6WN34 429 aa6.56□□□□□ -1.36
PTPN12-206ENST00000435495 TMEM121BQ9BXQ6 578 aaPredicted RBP6.56□□□□□ -1.36
PTPN12-206ENST00000435495 EN1Q05925 392 aaPredicted RBP6.56□□□□□ -1.36
PTPN12-206ENST00000435495 BCL11AQ9H165 835 aa6.56□□□□□ -1.36
PTPN12-206ENST00000435495 USP35Q9P2H5 1018 aa6.56□□□□□ -1.36
PTPN12-206ENST00000435495 ATN1P54259 1190 aaPredicted RBP6.55□□□□□ -1.36
PTPN12-206ENST00000435495 PADI6Q6TGC4 694 aa6.55□□□□□ -1.36
PTPN12-206ENST00000435495 PCDHGA10Q9Y5H3 936 aa6.55□□□□□ -1.36
PTPN12-206ENST00000435495 FAM177A1Q8N128 213 aaPredicted RBP6.54□□□□□ -1.36
PTPN12-206ENST00000435495 TIE1P35590 1138 aa6.53□□□□□ -1.36
PTPN12-206ENST00000435495 IRX5P78411 483 aaPredicted RBP6.53□□□□□ -1.36
PTPN12-206ENST00000435495 CDCA8Q53HL2 280 aa6.53□□□□□ -1.36
PTPN12-206ENST00000435495 PCDHB15Q9Y5E8 787 aa6.53□□□□□ -1.36
PTPN12-206ENST00000435495 PXYLP1Q8TE99 480 aa6.52□□□□□ -1.37
PTPN12-206ENST00000435495 HMX1Q9NP08 348 aaPredicted RBP6.52□□□□□ -1.37
PTPN12-206ENST00000435495 GPR37L1O60883 481 aa6.51□□□□□ -1.37
PTPN12-206ENST00000435495 NDUFV2P19404 249 aa6.51□□□□□ -1.37
PTPN12-206ENST00000435495 E9PSI1 815 aa6.51□□□□□ -1.37
PTPN12-206ENST00000435495 C3orf80F5H4A9 247 aa6.51□□□□□ -1.37
PTPN12-206ENST00000435495 AP1G2O75843 785 aa6.5□□□□□ -1.37
PTPN12-206ENST00000435495 MOXD2PA6NHM9 499 aa6.5□□□□□ -1.37
PTPN12-206ENST00000435495 RTL5Q5HYW3 569 aaPredicted RBP6.5□□□□□ -1.37
PTPN12-206ENST00000435495 CFAP70Q5T0N1 1121 aa6.5□□□□□ -1.37
PTPN12-206ENST00000435495 HDGFL1Q5TGJ6 251 aa6.5□□□□□ -1.37
PTPN12-206ENST00000435495 CABLES1Q8TDN4 633 aa6.5□□□□□ -1.37
PTPN12-206ENST00000435495 ADGRG1Q9Y653 693 aa6.5□□□□□ -1.37
PTPN12-206ENST00000435495 HLA-CQ95604 372 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms