RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 INO80Q9ULG1 1556 aaPredicted RBP16.92■□□□□ 0.3
CTCFL-209ENST00000433949 MLH3Q9UHC1 1453 aa16.92■□□□□ 0.3
CTCFL-209ENST00000433949 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
CTCFL-209ENST00000433949 NUP155O75694 1391 aa16.91■□□□□ 0.3
CTCFL-209ENST00000433949 HECW2Q9P2P5 1572 aa16.9■□□□□ 0.3
CTCFL-209ENST00000433949 PZPP20742 1482 aa16.9■□□□□ 0.3
CTCFL-209ENST00000433949 PLXNC1O60486 1568 aa16.9■□□□□ 0.3
CTCFL-209ENST00000433949 DUOX2Q9NRD8 1548 aa16.9■□□□□ 0.3
CTCFL-209ENST00000433949 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
CTCFL-209ENST00000433949 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.29
CTCFL-209ENST00000433949 GGT6Q6P531 493 aa16.89■□□□□ 0.29
CTCFL-209ENST00000433949 A2MP01023 1474 aa16.87■□□□□ 0.29
CTCFL-209ENST00000433949 KDM5DQ9BY66 1539 aa16.87■□□□□ 0.29
CTCFL-209ENST00000433949 ABCA6Q8N139 1617 aa16.86■□□□□ 0.29
CTCFL-209ENST00000433949 ERBINQ96RT1 1412 aa16.85■□□□□ 0.29
CTCFL-209ENST00000433949 MLECQ14165 292 aa16.85■□□□□ 0.29
CTCFL-209ENST00000433949 DDX10Q13206 875 aaKnown RBP16.83■□□□□ 0.28
CTCFL-209ENST00000433949 PKD2Q13563 968 aa16.83■□□□□ 0.28
CTCFL-209ENST00000433949 DIP2CQ9Y2E4 1556 aa16.83■□□□□ 0.28
CTCFL-209ENST00000433949 L3MBTL2Q969R5 705 aa16.82■□□□□ 0.28
CTCFL-209ENST00000433949 ARID4BQ4LE39 1312 aaPredicted RBP16.82■□□□□ 0.28
CTCFL-209ENST00000433949 ZMYM4Q5VZL5 1548 aa16.82■□□□□ 0.28
CTCFL-209ENST00000433949 ATP10AO60312 1499 aa16.81■□□□□ 0.28
CTCFL-209ENST00000433949 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
CTCFL-209ENST00000433949 GTF3C3Q9Y5Q9 886 aa16.79■□□□□ 0.28
CTCFL-209ENST00000433949 EIF4G2P78344 907 aaKnown RBP eCLIP16.78■□□□□ 0.28
CTCFL-209ENST00000433949 WASHC2CQ9Y4E1 1318 aa16.76■□□□□ 0.27
CTCFL-209ENST00000433949 HIRIP3Q9BW71 556 aaPredicted RBP16.76■□□□□ 0.27
CTCFL-209ENST00000433949 POLR1AO95602 1720 aaPredicted RBP16.76■□□□□ 0.27
CTCFL-209ENST00000433949 FAM135AQ9P2D6 1515 aa16.75■□□□□ 0.27
CTCFL-209ENST00000433949 KANK1Q14678 1352 aa16.75■□□□□ 0.27
CTCFL-209ENST00000433949 UNC13BO14795 1591 aa16.74■□□□□ 0.27
CTCFL-209ENST00000433949 ANP32CO43423 234 aa16.74■□□□□ 0.27
CTCFL-209ENST00000433949 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
CTCFL-209ENST00000433949 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
CTCFL-209ENST00000433949 ARHGEF40Q8TER5 1519 aa16.73■□□□□ 0.27
CTCFL-209ENST00000433949 SIGLEC1Q9BZZ2 1709 aa16.71■□□□□ 0.27
CTCFL-209ENST00000433949 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
CTCFL-209ENST00000433949 MROH1Q8NDA8 1641 aa16.69■□□□□ 0.26
CTCFL-209ENST00000433949 PLPPR3Q6T4P5 718 aa16.68■□□□□ 0.26
CTCFL-209ENST00000433949 IQGAP3Q86VI3 1631 aa16.68■□□□□ 0.26
CTCFL-209ENST00000433949 DEPDC5O75140 1603 aa16.68■□□□□ 0.26
CTCFL-209ENST00000433949 NBPF8Q3BBV2 869 aa16.68■□□□□ 0.26
CTCFL-209ENST00000433949 ESF1Q9H501 851 aaKnown RBP16.67■□□□□ 0.26
CTCFL-209ENST00000433949 PRDM15P57071 1507 aaPredicted RBP16.67■□□□□ 0.26
CTCFL-209ENST00000433949 UHRF1BP1Q6BDS2 1440 aa16.66■□□□□ 0.26
CTCFL-209ENST00000433949 SPATA31E1Q6ZUB1 1445 aa16.66■□□□□ 0.26
CTCFL-209ENST00000433949 WASHC2AQ641Q2 1341 aa16.66■□□□□ 0.26
CTCFL-209ENST00000433949 RNF17Q9BXT8 1623 aaKnown RBP16.64■□□□□ 0.26
CTCFL-209ENST00000433949 AGLP35573 1532 aa16.63■□□□□ 0.25
CTCFL-209ENST00000433949 CEP152O94986 1710 aa16.63■□□□□ 0.25
CTCFL-209ENST00000433949 VWDEQ8N2E2 1590 aa16.63■□□□□ 0.25
CTCFL-209ENST00000433949 REREQ9P2R6 1566 aa16.63■□□□□ 0.25
CTCFL-209ENST00000433949 ABCC3O15438 1527 aa16.62■□□□□ 0.25
CTCFL-209ENST00000433949 FBXO31Q5XUX0 539 aaPredicted RBP16.62■□□□□ 0.25
CTCFL-209ENST00000433949 CNTLNQ9NXG0 1405 aa16.62■□□□□ 0.25
CTCFL-209ENST00000433949 RALGAPBQ86X10 1494 aa16.61■□□□□ 0.25
CTCFL-209ENST00000433949 CCDC7Q96M83 1385 aa16.61■□□□□ 0.25
CTCFL-209ENST00000433949 CFAP65Q6ZU64 1925 aaKnown RBP16.61■□□□□ 0.25
CTCFL-209ENST00000433949 PLA2R1Q13018 1463 aa16.61■□□□□ 0.25
CTCFL-209ENST00000433949 RGL3Q3MIN7 710 aa16.61■□□□□ 0.25
CTCFL-209ENST00000433949 BCORL1Q5H9F3 1711 aa16.6■□□□□ 0.25
CTCFL-209ENST00000433949 E9PCH4 1651 aa16.6■□□□□ 0.25
CTCFL-209ENST00000433949 CCDC144AA2RUR9 1427 aa16.6■□□□□ 0.25
CTCFL-209ENST00000433949 NPATQ14207 1427 aa16.6■□□□□ 0.25
CTCFL-209ENST00000433949 TET3O43151 1660 aa16.58■□□□□ 0.25
CTCFL-209ENST00000433949 CEBPAP49715 358 aaPredicted RBP16.58■□□□□ 0.25
CTCFL-209ENST00000433949 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
CTCFL-209ENST00000433949 EFCAB6Q5THR3 1501 aa16.57■□□□□ 0.24
CTCFL-209ENST00000433949 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
CTCFL-209ENST00000433949 USP47Q96K76 1375 aa16.56■□□□□ 0.24
CTCFL-209ENST00000433949 LMTK2Q8IWU2 1503 aa16.56■□□□□ 0.24
CTCFL-209ENST00000433949 KDM2AQ9Y2K7 1162 aa16.55■□□□□ 0.24
CTCFL-209ENST00000433949 ZMYM3Q14202 1370 aa16.55■□□□□ 0.24
CTCFL-209ENST00000433949 CLTCQ00610 1675 aaKnown RBP16.55■□□□□ 0.24
CTCFL-209ENST00000433949 UGGT1Q9NYU2 1555 aa16.54■□□□□ 0.24
CTCFL-209ENST00000433949 CAMSAP1Q5T5Y3 1602 aa16.54■□□□□ 0.24
CTCFL-209ENST00000433949 ZNF326Q5BKZ1 582 aaKnown RBP16.54■□□□□ 0.24
CTCFL-209ENST00000433949 KIF7Q2M1P5 1343 aa16.53■□□□□ 0.24
CTCFL-209ENST00000433949 C11orf95C9JLR9 678 aaPredicted RBP16.52■□□□□ 0.24
CTCFL-209ENST00000433949 PTPRTO14522 1441 aa16.52■□□□□ 0.24
CTCFL-209ENST00000433949 DCAF11Q8TEB1 546 aa16.51■□□□□ 0.23
CTCFL-209ENST00000433949 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
CTCFL-209ENST00000433949 IDI1Q13907 227 aa16.5■□□□□ 0.23
CTCFL-209ENST00000433949 ZC3H13Q5T200 1668 aaKnown RBP16.49■□□□□ 0.23
CTCFL-209ENST00000433949 LAMC1P11047 1609 aa16.49■□□□□ 0.23
CTCFL-209ENST00000433949 ARHGAP31Q2M1Z3 1444 aa16.49■□□□□ 0.23
CTCFL-209ENST00000433949 SPHKAPQ2M3C7 1700 aa16.49■□□□□ 0.23
CTCFL-209ENST00000433949 ROCK2O75116 1388 aaKnown RBP16.49■□□□□ 0.23
CTCFL-209ENST00000433949 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
CTCFL-209ENST00000433949 SENP3Q9H4L4 574 aaPredicted RBP16.49■□□□□ 0.23
CTCFL-209ENST00000433949 TRPM2O94759 1503 aa16.48■□□□□ 0.23
CTCFL-209ENST00000433949 PRAG1Q86YV5 1406 aa16.48■□□□□ 0.23
CTCFL-209ENST00000433949 CLTCL1P53675 1640 aa16.46■□□□□ 0.23
CTCFL-209ENST00000433949 NUTM2DQ5VT03 806 aaPredicted RBP16.46■□□□□ 0.23
CTCFL-209ENST00000433949 NOS1P29475 1434 aa16.46■□□□□ 0.23
CTCFL-209ENST00000433949 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
CTCFL-209ENST00000433949 PRKRIP1Q9H875 184 aaPredicted RBP16.45■□□□□ 0.22
CTCFL-209ENST00000433949 ERVK-7P63135 1459 aa16.45■□□□□ 0.22
CTCFL-209ENST00000433949 SYNMO15061 1565 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms