RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 TIMELESSQ9UNS1 1208 aa10.79□□□□□ -0.68
PTP4A1P3-201ENST00000433661 MAP3K7O43318 606 aa10.78□□□□□ -0.68
PTP4A1P3-201ENST00000433661 GPR153Q6NV75 609 aa10.78□□□□□ -0.68
PTP4A1P3-201ENST00000433661 CDHR5Q9HBB8 845 aa10.78□□□□□ -0.68
PTP4A1P3-201ENST00000433661 SCUBE2Q9NQ36 999 aa10.78□□□□□ -0.68
PTP4A1P3-201ENST00000433661 PARP9Q8IXQ6 854 aa10.77□□□□□ -0.69
PTP4A1P3-201ENST00000433661 DDRGK1Q96HY6 314 aa10.76□□□□□ -0.69
PTP4A1P3-201ENST00000433661 TMUB1Q9BVT8 246 aa10.76□□□□□ -0.69
PTP4A1P3-201ENST00000433661 TTC13Q8NBP0 860 aa10.75□□□□□ -0.69
PTP4A1P3-201ENST00000433661 ZDHHC16Q969W1 377 aa10.75□□□□□ -0.69
PTP4A1P3-201ENST00000433661 PSDA5PKW4 1024 aaPredicted RBP10.74□□□□□ -0.69
PTP4A1P3-201ENST00000433661 GOPCQ9HD26 462 aa10.74□□□□□ -0.69
PTP4A1P3-201ENST00000433661 TSR1Q2NL82 804 aaKnown RBP10.73□□□□□ -0.69
PTP4A1P3-201ENST00000433661 C6orf132Q5T0Z8 1188 aa10.72□□□□□ -0.69
PTP4A1P3-201ENST00000433661 PLEKHG3A1L390 1219 aa10.7□□□□□ -0.7
PTP4A1P3-201ENST00000433661 NUDT7P0C024 238 aa10.7□□□□□ -0.7
PTP4A1P3-201ENST00000433661 ARSIQ5FYB1 569 aa10.7□□□□□ -0.7
PTP4A1P3-201ENST00000433661 FAM117AQ9C073 453 aa10.7□□□□□ -0.7
PTP4A1P3-201ENST00000433661 SNPHO15079 494 aa10.69□□□□□ -0.7
PTP4A1P3-201ENST00000433661 OATP04181 439 aa10.69□□□□□ -0.7
PTP4A1P3-201ENST00000433661 ZNF454Q8N9F8 522 aa10.69□□□□□ -0.7
PTP4A1P3-201ENST00000433661 IL27Q8NEV9 243 aa10.69□□□□□ -0.7
PTP4A1P3-201ENST00000433661 RBM33Q96EV2 1170 aaKnown RBP10.69□□□□□ -0.7
PTP4A1P3-201ENST00000433661 CLCN1P35523 988 aa10.68□□□□□ -0.7
PTP4A1P3-201ENST00000433661 GIGYF2Q6Y7W6 1299 aaKnown RBP10.67□□□□□ -0.7
PTP4A1P3-201ENST00000433661 ADAM33Q9BZ11 813 aa10.67□□□□□ -0.7
PTP4A1P3-201ENST00000433661 BCL2L12Q9HB09 334 aa10.67□□□□□ -0.7
PTP4A1P3-201ENST00000433661 METTL3Q86U44 580 aaKnown RBP10.66□□□□□ -0.7
PTP4A1P3-201ENST00000433661 GPCPD1Q9NPB8 672 aa10.66□□□□□ -0.7
PTP4A1P3-201ENST00000433661 ADGRG1Q9Y653 693 aa10.66□□□□□ -0.7
PTP4A1P3-201ENST00000433661 HOXB1P14653 301 aaPredicted RBP10.65□□□□□ -0.7
PTP4A1P3-201ENST00000433661 TTLL12Q14166 644 aaPredicted RBP10.65□□□□□ -0.7
PTP4A1P3-201ENST00000433661 ZNF710Q8N1W2 664 aa10.65□□□□□ -0.7
PTP4A1P3-201ENST00000433661 PRSS12P56730 875 aa10.64□□□□□ -0.71
PTP4A1P3-201ENST00000433661 PPP4R3BQ5MIZ7 849 aa10.64□□□□□ -0.71
PTP4A1P3-201ENST00000433661 PXYLP1Q8TE99 480 aa10.64□□□□□ -0.71
PTP4A1P3-201ENST00000433661 KHSRPQ92945 711 aaKnown RBP eCLIP10.64□□□□□ -0.71
PTP4A1P3-201ENST00000433661 PHOX2BQ99453 314 aa10.64□□□□□ -0.71
PTP4A1P3-201ENST00000433661 REPIN1Q9BWE0 567 aaKnown RBP10.64□□□□□ -0.71
PTP4A1P3-201ENST00000433661 PADI6Q6TGC4 694 aa10.63□□□□□ -0.71
PTP4A1P3-201ENST00000433661 LHX6Q9UPM6 363 aa10.63□□□□□ -0.71
PTP4A1P3-201ENST00000433661 MS4A1P11836 297 aa10.62□□□□□ -0.71
PTP4A1P3-201ENST00000433661 PPP1R3GB7ZBB8 358 aa10.6□□□□□ -0.71
PTP4A1P3-201ENST00000433661 C14orf37Q86TY3 774 aa10.6□□□□□ -0.71
PTP4A1P3-201ENST00000433661 CDCA7LQ96GN5 454 aa10.6□□□□□ -0.71
PTP4A1P3-201ENST00000433661 ONECUT3O60422 494 aaPredicted RBP10.59□□□□□ -0.71
PTP4A1P3-201ENST00000433661 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
PTP4A1P3-201ENST00000433661 FAM217BQ9NTX9 383 aaPredicted RBP10.58□□□□□ -0.72
PTP4A1P3-201ENST00000433661 MDM2Q00987 491 aaPredicted RBP10.57□□□□□ -0.72
PTP4A1P3-201ENST00000433661 RBM46Q8TBY0 533 aaKnown RBP10.57□□□□□ -0.72
PTP4A1P3-201ENST00000433661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.56□□□□□ -0.72
PTP4A1P3-201ENST00000433661 PTPREP23469 700 aa10.56□□□□□ -0.72
PTP4A1P3-201ENST00000433661 SSTR3P32745 418 aaPredicted RBP10.55□□□□□ -0.72
PTP4A1P3-201ENST00000433661 EYA1Q99502 592 aa10.55□□□□□ -0.72
PTP4A1P3-201ENST00000433661 COL9A1P20849 921 aa10.54□□□□□ -0.72
PTP4A1P3-201ENST00000433661 OTUD5Q96G74 571 aa10.54□□□□□ -0.72
PTP4A1P3-201ENST00000433661 RSPH6AQ9H0K4 717 aa10.54□□□□□ -0.72
PTP4A1P3-201ENST00000433661 FAM198AQ9UFP1 575 aa10.54□□□□□ -0.72
PTP4A1P3-201ENST00000433661 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
PTP4A1P3-201ENST00000433661 TSKSQ9UJT2 592 aa10.51□□□□□ -0.73
PTP4A1P3-201ENST00000433661 SKIV2LQ15477 1246 aaKnown RBP10.5□□□□□ -0.73
PTP4A1P3-201ENST00000433661 DIXDC1Q155Q3 683 aa10.5□□□□□ -0.73
PTP4A1P3-201ENST00000433661 FAM161AQ3B820 660 aa10.5□□□□□ -0.73
PTP4A1P3-201ENST00000433661 SLC4A5Q9BY07 1137 aa10.5□□□□□ -0.73
PTP4A1P3-201ENST00000433661 NBPF26B4DH59 902 aa10.49□□□□□ -0.73
PTP4A1P3-201ENST00000433661 FLIIQ13045 1269 aa10.48□□□□□ -0.73
PTP4A1P3-201ENST00000433661 PCMTD1Q96MG8 357 aaPredicted RBP10.48□□□□□ -0.73
PTP4A1P3-201ENST00000433661 BEGAINQ9BUH8 593 aa10.48□□□□□ -0.73
PTP4A1P3-201ENST00000433661 RCCD1A6NED2 376 aa10.47□□□□□ -0.73
PTP4A1P3-201ENST00000433661 PACS2Q86VP3 889 aa10.47□□□□□ -0.73
PTP4A1P3-201ENST00000433661 DNAJB2P25686 324 aa10.46□□□□□ -0.73
PTP4A1P3-201ENST00000433661 TUSC1Q2TAM9 212 aa10.46□□□□□ -0.73
PTP4A1P3-201ENST00000433661 SULF1Q8IWU6 871 aa10.45□□□□□ -0.74
PTP4A1P3-201ENST00000433661 TATDN2Q93075 761 aa10.45□□□□□ -0.74
PTP4A1P3-201ENST00000433661 TMEM134Q9H6X4 195 aa10.45□□□□□ -0.74
PTP4A1P3-201ENST00000433661 CD46P15529 392 aa10.44□□□□□ -0.74
PTP4A1P3-201ENST00000433661 KCNH8Q96L42 1107 aa10.44□□□□□ -0.74
PTP4A1P3-201ENST00000433661 ZBED2Q9BTP6 218 aa10.44□□□□□ -0.74
PTP4A1P3-201ENST00000433661 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.44□□□□□ -0.74
PTP4A1P3-201ENST00000433661 GJA5P36382 358 aa10.43□□□□□ -0.74
PTP4A1P3-201ENST00000433661 NUDT18Q6ZVK8 323 aa10.43□□□□□ -0.74
PTP4A1P3-201ENST00000433661 PBX2P40425 430 aa10.42□□□□□ -0.74
PTP4A1P3-201ENST00000433661 MYSM1Q5VVJ2 828 aa10.42□□□□□ -0.74
PTP4A1P3-201ENST00000433661 ZMYND15Q9H091 742 aa10.42□□□□□ -0.74
PTP4A1P3-201ENST00000433661 C3orf80F5H4A9 247 aa10.41□□□□□ -0.74
PTP4A1P3-201ENST00000433661 LHX8Q68G74 356 aa10.41□□□□□ -0.74
PTP4A1P3-201ENST00000433661 NLRP7Q8WX94 980 aa10.41□□□□□ -0.74
PTP4A1P3-201ENST00000433661 KCNK17Q96T54 332 aa10.4□□□□□ -0.74
PTP4A1P3-201ENST00000433661 RABGEF1Q9UJ41 708 aa10.4□□□□□ -0.74
PTP4A1P3-201ENST00000433661 PNMA3Q9UL41 463 aa10.4□□□□□ -0.74
PTP4A1P3-201ENST00000433661 ARHGAP33O14559 1287 aa10.39□□□□□ -0.75
PTP4A1P3-201ENST00000433661 TBC1D2Q9BYX2 928 aa10.39□□□□□ -0.75
PTP4A1P3-201ENST00000433661 CLK2P49760 499 aaKnown RBP10.37□□□□□ -0.75
PTP4A1P3-201ENST00000433661 PROX2Q3B8N5 592 aa10.37□□□□□ -0.75
PTP4A1P3-201ENST00000433661 PPP2R2DQ66LE6 453 aa10.37□□□□□ -0.75
PTP4A1P3-201ENST00000433661 SOCS7O14512 581 aa10.36□□□□□ -0.75
PTP4A1P3-201ENST00000433661 POTEEQ6S8J3 1075 aa10.36□□□□□ -0.75
PTP4A1P3-201ENST00000433661 SPTLC1O15269 473 aa10.35□□□□□ -0.75
PTP4A1P3-201ENST00000433661 ZNF687Q8N1G0 1237 aa10.35□□□□□ -0.75
PTP4A1P3-201ENST00000433661 SPIRE2Q8WWL2 714 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms