RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 DDX27Q96GQ7 796 aaKnown RBP7.76□□□□□ -1.17
HMGB1P9-201ENST00000429856 SOWAHBA6NEL2 793 aa7.75□□□□□ -1.17
HMGB1P9-201ENST00000429856 BCAMP50895 628 aa7.74□□□□□ -1.17
HMGB1P9-201ENST00000429856 LAPTM4AQ15012 233 aa7.74□□□□□ -1.17
HMGB1P9-201ENST00000429856 PROX2Q3B8N5 592 aa7.74□□□□□ -1.17
HMGB1P9-201ENST00000429856 PCDHGA10Q9Y5H3 936 aa7.74□□□□□ -1.17
HMGB1P9-201ENST00000429856 ONECUT3O60422 494 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P9-201ENST00000429856 TYW1BQ6NUM6 668 aa7.73□□□□□ -1.17
HMGB1P9-201ENST00000429856 ZFRQ96KR1 1074 aaKnown RBP7.73□□□□□ -1.17
HMGB1P9-201ENST00000429856 KIAA1468Q9P260 1216 aa7.73□□□□□ -1.17
HMGB1P9-201ENST00000429856 COL9A1P20849 921 aa7.72□□□□□ -1.17
HMGB1P9-201ENST00000429856 PHF14O94880 888 aa7.71□□□□□ -1.18
HMGB1P9-201ENST00000429856 LCE2BO14633 110 aa7.7□□□□□ -1.18
HMGB1P9-201ENST00000429856 WBP1LQ9NX94 342 aa7.7□□□□□ -1.18
HMGB1P9-201ENST00000429856 DCAF8L2P0C7V8 631 aa7.68□□□□□ -1.18
HMGB1P9-201ENST00000429856 MFSD10Q14728 455 aa7.68□□□□□ -1.18
HMGB1P9-201ENST00000429856 EPAS1Q99814 870 aa7.68□□□□□ -1.18
HMGB1P9-201ENST00000429856 EMILIN3Q9NT22 766 aa7.68□□□□□ -1.18
HMGB1P9-201ENST00000429856 TSR3Q9UJK0 312 aaKnown RBP7.68□□□□□ -1.18
HMGB1P9-201ENST00000429856 FAM98CQ17RN3 349 aaKnown RBP7.67□□□□□ -1.18
HMGB1P9-201ENST00000429856 C6orf132Q5T0Z8 1188 aa7.67□□□□□ -1.18
HMGB1P9-201ENST00000429856 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P9-201ENST00000429856 GTPBP6O43824 516 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P9-201ENST00000429856 GFRA3O60609 400 aa7.66□□□□□ -1.18
HMGB1P9-201ENST00000429856 LRCH3Q96II8 777 aa7.66□□□□□ -1.18
HMGB1P9-201ENST00000429856 TRAF7Q6Q0C0 670 aa7.65□□□□□ -1.18
HMGB1P9-201ENST00000429856 SEPT9Q9UHD8 586 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P9-201ENST00000429856 TRIM6-TRIM34B2RNG4 842 aa7.64□□□□□ -1.19
HMGB1P9-201ENST00000429856 HPS5Q9UPZ3 1129 aa7.64□□□□□ -1.19
HMGB1P9-201ENST00000429856 PACS2Q86VP3 889 aa7.63□□□□□ -1.19
HMGB1P9-201ENST00000429856 PPP4CP60510 307 aa7.62□□□□□ -1.19
HMGB1P9-201ENST00000429856 RBM33Q96EV2 1170 aaKnown RBP7.6□□□□□ -1.19
HMGB1P9-201ENST00000429856 PRKD2Q9BZL6 878 aa7.58□□□□□ -1.2
HMGB1P9-201ENST00000429856 NRG2O14511 850 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P9-201ENST00000429856 V9GY48 417 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P9-201ENST00000429856 DPYSL4O14531 572 aa7.55□□□□□ -1.2
HMGB1P9-201ENST00000429856 CAMK2BQ13554 666 aa7.55□□□□□ -1.2
HMGB1P9-201ENST00000429856 TJAP1Q5JTD0 557 aa7.55□□□□□ -1.2
HMGB1P9-201ENST00000429856 DDX12PQ92771 950 aa7.55□□□□□ -1.2
HMGB1P9-201ENST00000429856 HDGFP51858 240 aaKnown RBP7.54□□□□□ -1.2
HMGB1P9-201ENST00000429856 IL21Q9HBE4 155 aa7.54□□□□□ -1.2
HMGB1P9-201ENST00000429856 BBXQ8WY36 941 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P9-201ENST00000429856 TSKSQ9UJT2 592 aa7.53□□□□□ -1.2
HMGB1P9-201ENST00000429856 MAP3K7O43318 606 aa7.52□□□□□ -1.21
HMGB1P9-201ENST00000429856 ZNF787Q6DD87 383 aa7.52□□□□□ -1.21
HMGB1P9-201ENST00000429856 PPP1R18Q6NYC8 613 aa7.52□□□□□ -1.21
HMGB1P9-201ENST00000429856 CADPS2Q86UW7 1296 aa7.52□□□□□ -1.21
HMGB1P9-201ENST00000429856 LOC100996750A0A140TA64 210 aa7.51□□□□□ -1.21
HMGB1P9-201ENST00000429856 EN1Q05925 392 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P9-201ENST00000429856 SAMD7Q7Z3H4 446 aa7.51□□□□□ -1.21
HMGB1P9-201ENST00000429856 MTRQ99707 1265 aa7.51□□□□□ -1.21
HMGB1P9-201ENST00000429856 KRTAP4-6Q9BYQ5 205 aa7.51□□□□□ -1.21
HMGB1P9-201ENST00000429856 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.51□□□□□ -1.21
HMGB1P9-201ENST00000429856 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P9-201ENST00000429856 NBR1Q14596 966 aa7.5□□□□□ -1.21
HMGB1P9-201ENST00000429856 CERKQ8TCT0 537 aa7.5□□□□□ -1.21
HMGB1P9-201ENST00000429856 CDCA7LQ96GN5 454 aa7.5□□□□□ -1.21
HMGB1P9-201ENST00000429856 GGCXP38435 758 aa7.49□□□□□ -1.21
HMGB1P9-201ENST00000429856 PRSS12P56730 875 aa7.49□□□□□ -1.21
HMGB1P9-201ENST00000429856 PDZRN3Q9UPQ7 1066 aa7.49□□□□□ -1.21
HMGB1P9-201ENST00000429856 TSR1Q2NL82 804 aaKnown RBP7.48□□□□□ -1.21
HMGB1P9-201ENST00000429856 NECTIN2Q92692 538 aa7.48□□□□□ -1.21
HMGB1P9-201ENST00000429856 SPDYE16A6NNV3 312 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P9-201ENST00000429856 SMAPO00193 183 aa7.47□□□□□ -1.21
HMGB1P9-201ENST00000429856 TATDN2Q93075 761 aa7.47□□□□□ -1.21
HMGB1P9-201ENST00000429856 NBPF26B4DH59 902 aa7.46□□□□□ -1.22
HMGB1P9-201ENST00000429856 ZNF516Q92618 1163 aa7.46□□□□□ -1.22
HMGB1P9-201ENST00000429856 PNMA3Q9UL41 463 aa7.46□□□□□ -1.22
HMGB1P9-201ENST00000429856 RNF40O75150 1001 aa7.44□□□□□ -1.22
HMGB1P9-201ENST00000429856 TMUB1Q9BVT8 246 aa7.44□□□□□ -1.22
HMGB1P9-201ENST00000429856 PDIA6Q15084 440 aa7.43□□□□□ -1.22
HMGB1P9-201ENST00000429856 SLC4A3P48751 1232 aa7.42□□□□□ -1.22
HMGB1P9-201ENST00000429856 SPRYD3Q8NCJ5 442 aa7.42□□□□□ -1.22
HMGB1P9-201ENST00000429856 FAM198AQ9UFP1 575 aa7.42□□□□□ -1.22
HMGB1P9-201ENST00000429856 APLP1P51693 650 aa7.41□□□□□ -1.22
HMGB1P9-201ENST00000429856 NKX2-3Q8TAU0 364 aa7.41□□□□□ -1.22
HMGB1P9-201ENST00000429856 ZNF775Q96BV0 537 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P9-201ENST00000429856 NUDT18Q6ZVK8 323 aa7.4□□□□□ -1.22
HMGB1P9-201ENST00000429856 PAXIP1Q6ZW49 1069 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P9-201ENST00000429856 GRXCR2A6NFK2 248 aa7.39□□□□□ -1.23
HMGB1P9-201ENST00000429856 PLCB2Q00722 1185 aa7.39□□□□□ -1.23
HMGB1P9-201ENST00000429856 SLF2Q8IX21 1173 aa7.39□□□□□ -1.23
HMGB1P9-201ENST00000429856 CFAP44Q96MT7 982 aa7.39□□□□□ -1.23
HMGB1P9-201ENST00000429856 COPS2P61201 443 aa7.38□□□□□ -1.23
HMGB1P9-201ENST00000429856 RBM27Q9P2N5 1060 aaKnown RBP7.38□□□□□ -1.23
HMGB1P9-201ENST00000429856 C3orf80F5H4A9 247 aa7.37□□□□□ -1.23
HMGB1P9-201ENST00000429856 PRR14Q9BWN1 585 aa7.37□□□□□ -1.23
HMGB1P9-201ENST00000429856 ZPR1O75312 459 aa7.36□□□□□ -1.23
HMGB1P9-201ENST00000429856 SLC19A1P41440 591 aa7.36□□□□□ -1.23
HMGB1P9-201ENST00000429856 PKDCCQ504Y2 493 aa7.36□□□□□ -1.23
HMGB1P9-201ENST00000429856 DGAT1O75907 488 aa7.35□□□□□ -1.23
HMGB1P9-201ENST00000429856 E2F4Q16254 413 aa7.35□□□□□ -1.23
HMGB1P9-201ENST00000429856 SWT1Q5T5J6 900 aaKnown RBP7.35□□□□□ -1.23
HMGB1P9-201ENST00000429856 PRIM1P49642 420 aaKnown RBP7.33□□□□□ -1.24
HMGB1P9-201ENST00000429856 WDR70Q9NW82 654 aa7.33□□□□□ -1.24
HMGB1P9-201ENST00000429856 ARIH1Q9Y4X5 557 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P9-201ENST00000429856 OSBPP22059 807 aa7.32□□□□□ -1.24
HMGB1P9-201ENST00000429856 PCDHB3Q9Y5E6 796 aa7.32□□□□□ -1.24
HMGB1P9-201ENST00000429856 RNF223E7ERA6 249 aa7.31□□□□□ -1.24
HMGB1P9-201ENST00000429856 MYT1Q01538 1121 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms