RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.34□□□□□ -0.11
PTPRK-211ENST00000429595 PTPN5P54829 565 aa14.32□□□□□ -0.12
PTPRK-211ENST00000429595 MRPL50Q8N5N7 158 aaKnown RBP14.32□□□□□ -0.12
PTPRK-211ENST00000429595 THSD4Q6ZMP0 1018 aa14.31□□□□□ -0.12
PTPRK-211ENST00000429595 PAXIP1Q6ZW49 1069 aaPredicted RBP14.3□□□□□ -0.12
PTPRK-211ENST00000429595 DDX12PQ92771 950 aa14.29□□□□□ -0.12
PTPRK-211ENST00000429595 CFAP44Q96MT7 982 aa14.29□□□□□ -0.12
PTPRK-211ENST00000429595 EPAS1Q99814 870 aa14.29□□□□□ -0.12
PTPRK-211ENST00000429595 NBPF3Q9H094 633 aa14.29□□□□□ -0.12
PTPRK-211ENST00000429595 WNT2BQ93097 391 aa14.28□□□□□ -0.12
PTPRK-211ENST00000429595 C6orf132Q5T0Z8 1188 aa14.27□□□□□ -0.13
PTPRK-211ENST00000429595 RABGEF1Q9UJ41 708 aa14.27□□□□□ -0.13
PTPRK-211ENST00000429595 PDIA6Q15084 440 aa14.26□□□□□ -0.13
PTPRK-211ENST00000429595 GOLGA8CPA6NN73 597 aa14.25□□□□□ -0.13
PTPRK-211ENST00000429595 RBM33Q96EV2 1170 aaKnown RBP14.25□□□□□ -0.13
PTPRK-211ENST00000429595 CCDC180Q9P1Z9 1646 aa14.21□□□□□ -0.13
PTPRK-211ENST00000429595 E2F4Q16254 413 aa14.2□□□□□ -0.14
PTPRK-211ENST00000429595 KIAA1468Q9P260 1216 aa14.2□□□□□ -0.14
PTPRK-211ENST00000429595 NBR1Q14596 966 aa14.19□□□□□ -0.14
PTPRK-211ENST00000429595 EN1Q05925 392 aaPredicted RBP14.18□□□□□ -0.14
PTPRK-211ENST00000429595 SPDYE16A6NNV3 312 aaPredicted RBP14.17□□□□□ -0.14
PTPRK-211ENST00000429595 TSR1Q2NL82 804 aaKnown RBP14.17□□□□□ -0.14
PTPRK-211ENST00000429595 TRIM6-TRIM34B2RNG4 842 aa14.16□□□□□ -0.14
PTPRK-211ENST00000429595 ONECUT3O60422 494 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-211ENST00000429595 PRIM1P49642 420 aaKnown RBP14.16□□□□□ -0.14
PTPRK-211ENST00000429595 ARIH1Q9Y4X5 557 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-211ENST00000429595 SEPT9Q9UHD8 586 aaPredicted RBP14.15□□□□□ -0.14
PTPRK-211ENST00000429595 LAPTM4BQ86VI4 370 aa14.14□□□□□ -0.15
PTPRK-211ENST00000429595 ANKK1Q8NFD2 765 aa14.14□□□□□ -0.15
PTPRK-211ENST00000429595 BCAMP50895 628 aa14.13□□□□□ -0.15
PTPRK-211ENST00000429595 MAP3K7O43318 606 aa14.12□□□□□ -0.15
PTPRK-211ENST00000429595 ZFRQ96KR1 1074 aaKnown RBP14.12□□□□□ -0.15
PTPRK-211ENST00000429595 WDR70Q9NW82 654 aa14.12□□□□□ -0.15
PTPRK-211ENST00000429595 TSKSQ9UJT2 592 aa14.1□□□□□ -0.15
PTPRK-211ENST00000429595 SOWAHBA6NEL2 793 aa14.09□□□□□ -0.15
PTPRK-211ENST00000429595 IFFO2Q5TF58 517 aa14.09□□□□□ -0.15
PTPRK-211ENST00000429595 GRXCR2A6NFK2 248 aa14.06□□□□□ -0.16
PTPRK-211ENST00000429595 FAM98CQ17RN3 349 aaKnown RBP14.05□□□□□ -0.16
PTPRK-211ENST00000429595 FAM198AQ9UFP1 575 aa14.04□□□□□ -0.16
PTPRK-211ENST00000429595 OSBPP22059 807 aa14.02□□□□□ -0.17
PTPRK-211ENST00000429595 CDHR5Q9HBB8 845 aa14.02□□□□□ -0.17
PTPRK-211ENST00000429595 WBP1LQ9NX94 342 aa14.02□□□□□ -0.17
PTPRK-211ENST00000429595 TSHZ2Q9NRE2 1034 aa14.01□□□□□ -0.17
PTPRK-211ENST00000429595 A0A0G2JS52 829 aa14□□□□□ -0.17
PTPRK-211ENST00000429595 C3orf80F5H4A9 247 aa14□□□□□ -0.17
PTPRK-211ENST00000429595 CDCA7LQ96GN5 454 aa14□□□□□ -0.17
PTPRK-211ENST00000429595 PRSS12P56730 875 aa13.99□□□□□ -0.17
PTPRK-211ENST00000429595 PACS2Q86VP3 889 aa13.99□□□□□ -0.17
PTPRK-211ENST00000429595 ITGBL1O95965 494 aaPredicted RBP13.98□□□□□ -0.17
PTPRK-211ENST00000429595 SMAPO00193 183 aa13.97□□□□□ -0.17
PTPRK-211ENST00000429595 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.97□□□□□ -0.17
PTPRK-211ENST00000429595 RB1CC1Q8TDY2 1594 aa13.96□□□□□ -0.17
PTPRK-211ENST00000429595 LRCH3Q96II8 777 aa13.95□□□□□ -0.18
PTPRK-211ENST00000429595 HPS5Q9UPZ3 1129 aa13.95□□□□□ -0.18
PTPRK-211ENST00000429595 NYAP1Q6ZVC0 841 aa13.94□□□□□ -0.18
PTPRK-211ENST00000429595 CERKQ8TCT0 537 aa13.94□□□□□ -0.18
PTPRK-211ENST00000429595 TSR3Q9UJK0 312 aaKnown RBP13.93□□□□□ -0.18
PTPRK-211ENST00000429595 TATDN2Q93075 761 aa13.9□□□□□ -0.18
PTPRK-211ENST00000429595 RGS20O76081 388 aa13.89□□□□□ -0.19
PTPRK-211ENST00000429595 SAMD7Q7Z3H4 446 aa13.89□□□□□ -0.19
PTPRK-211ENST00000429595 KCNV2Q8TDN2 545 aa13.89□□□□□ -0.19
PTPRK-211ENST00000429595 NPDC1Q9NQX5 325 aaPredicted RBP13.89□□□□□ -0.19
PTPRK-211ENST00000429595 PNMA3Q9UL41 463 aa13.88□□□□□ -0.19
PTPRK-211ENST00000429595 NBPF26B4DH59 902 aa13.87□□□□□ -0.19
PTPRK-211ENST00000429595 MLLT3P42568 568 aaPredicted RBP13.86□□□□□ -0.19
PTPRK-211ENST00000429595 RBM27Q9P2N5 1060 aaKnown RBP13.86□□□□□ -0.19
PTPRK-211ENST00000429595 TTC13Q8NBP0 860 aa13.85□□□□□ -0.19
PTPRK-211ENST00000429595 ARHGEF1Q92888 912 aaKnown RBP13.85□□□□□ -0.19
PTPRK-211ENST00000429595 NUDT18Q6ZVK8 323 aa13.84□□□□□ -0.19
PTPRK-211ENST00000429595 PADI6Q6TGC4 694 aa13.83□□□□□ -0.2
PTPRK-211ENST00000429595 PPP4CP60510 307 aa13.82□□□□□ -0.2
PTPRK-211ENST00000429595 KCNC4Q03721 635 aa13.82□□□□□ -0.2
PTPRK-211ENST00000429595 TJAP1Q5JTD0 557 aa13.75□□□□□ -0.21
PTPRK-211ENST00000429595 RNF40O75150 1001 aa13.72□□□□□ -0.21
PTPRK-211ENST00000429595 IRX2Q9BZI1 471 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-211ENST00000429595 APLP1P51693 650 aa13.71□□□□□ -0.21
PTPRK-211ENST00000429595 SWT1Q5T5J6 900 aaKnown RBP13.71□□□□□ -0.21
PTPRK-211ENST00000429595 EYA1Q99502 592 aa13.71□□□□□ -0.21
PTPRK-211ENST00000429595 MTRQ99707 1265 aa13.71□□□□□ -0.21
PTPRK-211ENST00000429595 PTGDRQ13258 359 aa13.7□□□□□ -0.22
PTPRK-211ENST00000429595 NACADO15069 1562 aa13.67□□□□□ -0.22
PTPRK-211ENST00000429595 HDGFP51858 240 aaKnown RBP13.66□□□□□ -0.22
PTPRK-211ENST00000429595 SEMA3EO15041 775 aa13.65□□□□□ -0.22
PTPRK-211ENST00000429595 ZNF516Q92618 1163 aa13.65□□□□□ -0.22
PTPRK-211ENST00000429595 IL21Q9HBE4 155 aa13.65□□□□□ -0.22
PTPRK-211ENST00000429595 P3H3Q8IVL6 736 aa13.64□□□□□ -0.23
PTPRK-211ENST00000429595 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
PTPRK-211ENST00000429595 SLF2Q8IX21 1173 aa13.62□□□□□ -0.23
PTPRK-211ENST00000429595 PLCB2Q00722 1185 aa13.61□□□□□ -0.23
PTPRK-211ENST00000429595 NUTM2FA1L443 756 aa13.6□□□□□ -0.23
PTPRK-211ENST00000429595 ADGRG1Q9Y653 693 aa13.6□□□□□ -0.23
PTPRK-211ENST00000429595 FAM161AQ3B820 660 aa13.59□□□□□ -0.23
PTPRK-211ENST00000429595 NKX2-3Q8TAU0 364 aa13.58□□□□□ -0.24
PTPRK-211ENST00000429595 PPP1R18Q6NYC8 613 aa13.57□□□□□ -0.24
PTPRK-211ENST00000429595 COPS2P61201 443 aa13.56□□□□□ -0.24
PTPRK-211ENST00000429595 DNAJB2P25686 324 aa13.55□□□□□ -0.24
PTPRK-211ENST00000429595 NECTIN2Q92692 538 aa13.55□□□□□ -0.24
PTPRK-211ENST00000429595 RBM46Q8TBY0 533 aaKnown RBP13.54□□□□□ -0.24
PTPRK-211ENST00000429595 TMEM134Q9H6X4 195 aa13.54□□□□□ -0.24
PTPRK-211ENST00000429595 FCHSD2O94868 740 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms