RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 SPAG9O60271 1321 aaKnown RBP19.72■□□□□ 0.75
SCAP-206ENST00000428413 TMEM132EQ6IEE7 984 aa19.72■□□□□ 0.75
SCAP-206ENST00000428413 IQGAP2Q13576 1575 aa19.71■□□□□ 0.75
SCAP-206ENST00000428413 KDM6BO15054 1643 aa19.7■□□□□ 0.74
SCAP-206ENST00000428413 CFAP70Q5T0N1 1121 aa19.69■□□□□ 0.74
SCAP-206ENST00000428413 TROQ12816 1431 aaPredicted RBP19.69■□□□□ 0.74
SCAP-206ENST00000428413 NCOA1Q15788 1441 aa19.69■□□□□ 0.74
SCAP-206ENST00000428413 MIA2Q96PC5 1412 aa19.69■□□□□ 0.74
SCAP-206ENST00000428413 ERICH6BQ5W0A0 696 aa19.68■□□□□ 0.74
SCAP-206ENST00000428413 KIAA1107Q9UPP5 1409 aa19.68■□□□□ 0.74
SCAP-206ENST00000428413 C20orf194Q5TEA3 1177 aa19.68■□□□□ 0.74
SCAP-206ENST00000428413 SOX12O15370 315 aa19.67■□□□□ 0.74
SCAP-206ENST00000428413 C9orf84Q5VXU9 1444 aa19.67■□□□□ 0.74
SCAP-206ENST00000428413 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
SCAP-206ENST00000428413 PDE4AP27815 886 aa19.65■□□□□ 0.74
SCAP-206ENST00000428413 MORC1Q86VD1 984 aa19.64■□□□□ 0.74
SCAP-206ENST00000428413 UBE2Q2Q8WVN8 375 aa19.64■□□□□ 0.74
SCAP-206ENST00000428413 UGGT2Q9NYU1 1516 aa19.64■□□□□ 0.73
SCAP-206ENST00000428413 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.63■□□□□ 0.73
SCAP-206ENST00000428413 CUL7Q14999 1698 aa19.63■□□□□ 0.73
SCAP-206ENST00000428413 IPO9Q96P70 1041 aaKnown RBP19.63■□□□□ 0.73
SCAP-206ENST00000428413 CAMSAP2Q08AD1 1489 aa19.63■□□□□ 0.73
SCAP-206ENST00000428413 HECW1Q76N89 1606 aa19.62■□□□□ 0.73
SCAP-206ENST00000428413 NUP153P49790 1475 aaKnown RBP19.62■□□□□ 0.73
SCAP-206ENST00000428413 RPRD2Q5VT52 1461 aaKnown RBP19.62■□□□□ 0.73
SCAP-206ENST00000428413 KIAA0586Q9BVV6 1533 aa19.62■□□□□ 0.73
SCAP-206ENST00000428413 LAMC3Q9Y6N6 1575 aa19.6■□□□□ 0.73
SCAP-206ENST00000428413 SRPK2P78362 688 aaKnown RBP19.6■□□□□ 0.73
SCAP-206ENST00000428413 GOLGA2Q08379 1002 aa19.6■□□□□ 0.73
SCAP-206ENST00000428413 NUTM2FA1L443 756 aa19.59■□□□□ 0.73
SCAP-206ENST00000428413 FANCIQ9NVI1 1328 aa19.59■□□□□ 0.73
SCAP-206ENST00000428413 U2AF1L5P0DN76 240 aaPredicted RBP19.59■□□□□ 0.73
SCAP-206ENST00000428413 U2AF1Q01081 240 aaKnown RBP eCLIP19.59■□□□□ 0.73
SCAP-206ENST00000428413 COG6Q9Y2V7 657 aa19.59■□□□□ 0.73
SCAP-206ENST00000428413 CFAP43Q8NDM7 1665 aa19.58■□□□□ 0.72
SCAP-206ENST00000428413 GPATCH8Q9UKJ3 1502 aaKnown RBP19.57■□□□□ 0.72
SCAP-206ENST00000428413 BCAR3O75815 825 aa19.57■□□□□ 0.72
SCAP-206ENST00000428413 GRIN2AQ12879 1464 aa19.56■□□□□ 0.72
SCAP-206ENST00000428413 IL27Q8NEV9 243 aa19.56■□□□□ 0.72
SCAP-206ENST00000428413 TCERG1O14776 1098 aaKnown RBP19.55■□□□□ 0.72
SCAP-206ENST00000428413 CDCA8Q53HL2 280 aa19.55■□□□□ 0.72
SCAP-206ENST00000428413 SLKQ9H2G2 1235 aaPredicted RBP19.55■□□□□ 0.72
SCAP-206ENST00000428413 POGKQ9P215 609 aa19.54■□□□□ 0.72
SCAP-206ENST00000428413 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
SCAP-206ENST00000428413 SLC12A5Q9H2X9 1139 aa19.54■□□□□ 0.72
SCAP-206ENST00000428413 KIF21AQ7Z4S6 1674 aa19.53■□□□□ 0.72
SCAP-206ENST00000428413 PANK1Q8TE04 598 aa19.53■□□□□ 0.72
SCAP-206ENST00000428413 CTTNBP2Q8WZ74 1663 aa19.53■□□□□ 0.72
SCAP-206ENST00000428413 ELL2O00472 640 aaPredicted RBP19.52■□□□□ 0.72
SCAP-206ENST00000428413 PPP2R1AP30153 589 aa19.52■□□□□ 0.72
SCAP-206ENST00000428413 ROCK1Q13464 1354 aa19.51■□□□□ 0.71
SCAP-206ENST00000428413 DISP3Q9P2K9 1392 aa19.5■□□□□ 0.71
SCAP-206ENST00000428413 ARHGAP5Q13017 1502 aa19.5■□□□□ 0.71
SCAP-206ENST00000428413 WASHC2CQ9Y4E1 1318 aa19.49■□□□□ 0.71
SCAP-206ENST00000428413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.49■□□□□ 0.71
SCAP-206ENST00000428413 FTSJ3Q8IY81 847 aaKnown RBP19.49■□□□□ 0.71
SCAP-206ENST00000428413 RSPH4AQ5TD94 716 aa19.49■□□□□ 0.71
SCAP-206ENST00000428413 DENND4BO75064 1496 aaPredicted RBP19.47■□□□□ 0.71
SCAP-206ENST00000428413 PLEKHH2Q8IVE3 1493 aa19.46■□□□□ 0.71
SCAP-206ENST00000428413 MAGI1Q96QZ7 1491 aaPredicted RBP19.46■□□□□ 0.71
SCAP-206ENST00000428413 DHX29Q7Z478 1369 aaKnown RBP19.46■□□□□ 0.71
SCAP-206ENST00000428413 PKNOX2Q96KN3 472 aa19.46■□□□□ 0.71
SCAP-206ENST00000428413 CABP2Q9NPB3 220 aa19.46■□□□□ 0.71
SCAP-206ENST00000428413 MINK1Q8N4C8 1332 aaPredicted RBP19.45■□□□□ 0.7
SCAP-206ENST00000428413 DISP1Q96F81 1524 aa19.45■□□□□ 0.7
SCAP-206ENST00000428413 ATP10BO94823 1461 aa19.45■□□□□ 0.7
SCAP-206ENST00000428413 BRD4O60885 1362 aaPredicted RBP19.44■□□□□ 0.7
SCAP-206ENST00000428413 PZPP20742 1482 aa19.44■□□□□ 0.7
SCAP-206ENST00000428413 APBB1O00213 710 aa19.44■□□□□ 0.7
SCAP-206ENST00000428413 KANK1Q14678 1352 aa19.44■□□□□ 0.7
SCAP-206ENST00000428413 GGNBP2Q9H3C7 697 aa19.43■□□□□ 0.7
SCAP-206ENST00000428413 ESF1Q9H501 851 aaKnown RBP19.43■□□□□ 0.7
SCAP-206ENST00000428413 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
SCAP-206ENST00000428413 SMG6Q86US8 1419 aaKnown RBP19.43■□□□□ 0.7
SCAP-206ENST00000428413 ZBTB7CA1YPR0 619 aa19.43■□□□□ 0.7
SCAP-206ENST00000428413 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
SCAP-206ENST00000428413 SCAPERQ9BY12 1400 aa19.43■□□□□ 0.7
SCAP-206ENST00000428413 FBLN1P23142 703 aa19.42■□□□□ 0.7
SCAP-206ENST00000428413 PDE3BQ13370 1112 aa19.42■□□□□ 0.7
SCAP-206ENST00000428413 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
SCAP-206ENST00000428413 WDR62O43379 1518 aa19.41■□□□□ 0.7
SCAP-206ENST00000428413 UPF2Q9HAU5 1272 aaKnown RBP19.4■□□□□ 0.7
SCAP-206ENST00000428413 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
SCAP-206ENST00000428413 MTHFSP49914 203 aa19.39■□□□□ 0.7
SCAP-206ENST00000428413 ADGRF5Q8IZF2 1346 aa19.39■□□□□ 0.7
SCAP-206ENST00000428413 HSP90AA1P07900 732 aaKnown RBP19.39■□□□□ 0.69
SCAP-206ENST00000428413 TPRNQ4KMQ1 711 aa19.39■□□□□ 0.69
SCAP-206ENST00000428413 MAPK8IP3Q9UPT6 1336 aa19.38■□□□□ 0.69
SCAP-206ENST00000428413 GZF1Q9H116 711 aaPredicted RBP19.38■□□□□ 0.69
SCAP-206ENST00000428413 TEX14Q8IWB6 1497 aa19.37■□□□□ 0.69
SCAP-206ENST00000428413 TESK2Q96S53 571 aa19.37■□□□□ 0.69
SCAP-206ENST00000428413 TCOF1Q13428 1488 aaKnown RBP19.37■□□□□ 0.69
SCAP-206ENST00000428413 CENPJQ9HC77 1338 aaPredicted RBP19.37■□□□□ 0.69
SCAP-206ENST00000428413 SPINK5Q9NQ38 1064 aaPredicted RBP19.37■□□□□ 0.69
SCAP-206ENST00000428413 ABCA5Q8WWZ7 1642 aa19.37■□□□□ 0.69
SCAP-206ENST00000428413 ARID4BQ4LE39 1312 aaPredicted RBP19.36■□□□□ 0.69
SCAP-206ENST00000428413 GLIPR1L2Q4G1C9 344 aa19.36■□□□□ 0.69
SCAP-206ENST00000428413 TSR2Q969E8 191 aaKnown RBP19.36■□□□□ 0.69
SCAP-206ENST00000428413 ITPRIPQ8IWB1 547 aa19.36■□□□□ 0.69
SCAP-206ENST00000428413 SAMD9Q5K651 1589 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms