RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 MAP3K7O43318 606 aa12.72□□□□□ -0.37
HMGB1P32-201ENST00000425971 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
HMGB1P32-201ENST00000425971 C14orf37Q86TY3 774 aa12.7□□□□□ -0.38
HMGB1P32-201ENST00000425971 TSR1Q2NL82 804 aaKnown RBP12.69□□□□□ -0.38
HMGB1P32-201ENST00000425971 FBXW7Q969H0 707 aa12.69□□□□□ -0.38
HMGB1P32-201ENST00000425971 RBM33Q96EV2 1170 aaKnown RBP12.69□□□□□ -0.38
HMGB1P32-201ENST00000425971 FAM117AQ9C073 453 aa12.69□□□□□ -0.38
HMGB1P32-201ENST00000425971 FOSBP53539 338 aa12.68□□□□□ -0.38
HMGB1P32-201ENST00000425971 HOXB3P14651 431 aaPredicted RBP12.66□□□□□ -0.38
HMGB1P32-201ENST00000425971 PLEKHG3A1L390 1219 aa12.65□□□□□ -0.38
HMGB1P32-201ENST00000425971 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
HMGB1P32-201ENST00000425971 DOK7Q18PE1 504 aa12.64□□□□□ -0.39
HMGB1P32-201ENST00000425971 TTLL12Q14166 644 aaPredicted RBP12.63□□□□□ -0.39
HMGB1P32-201ENST00000425971 ZSWIM6Q9HCJ5 1215 aa12.62□□□□□ -0.39
HMGB1P32-201ENST00000425971 NUDT7P0C024 238 aa12.61□□□□□ -0.39
HMGB1P32-201ENST00000425971 TMUB1Q9BVT8 246 aa12.61□□□□□ -0.39
HMGB1P32-201ENST00000425971 ZNF454Q8N9F8 522 aa12.6□□□□□ -0.39
HMGB1P32-201ENST00000425971 KHSRPQ92945 711 aaKnown RBP eCLIP12.6□□□□□ -0.39
HMGB1P32-201ENST00000425971 ZDHHC16Q969W1 377 aa12.6□□□□□ -0.39
HMGB1P32-201ENST00000425971 REPIN1Q9BWE0 567 aaKnown RBP12.6□□□□□ -0.39
HMGB1P32-201ENST00000425971 ARSIQ5FYB1 569 aa12.59□□□□□ -0.39
HMGB1P32-201ENST00000425971 C6orf132Q5T0Z8 1188 aa12.59□□□□□ -0.39
HMGB1P32-201ENST00000425971 GPR153Q6NV75 609 aa12.59□□□□□ -0.39
HMGB1P32-201ENST00000425971 GIGYF2Q6Y7W6 1299 aaKnown RBP12.59□□□□□ -0.39
HMGB1P32-201ENST00000425971 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
HMGB1P32-201ENST00000425971 FAM163AQ96GL9 167 aaPredicted RBP12.59□□□□□ -0.39
HMGB1P32-201ENST00000425971 RIMBP2O15034 1052 aa12.57□□□□□ -0.4
HMGB1P32-201ENST00000425971 SNPHO15079 494 aa12.57□□□□□ -0.4
HMGB1P32-201ENST00000425971 MS4A1P11836 297 aa12.57□□□□□ -0.4
HMGB1P32-201ENST00000425971 PHOX2BQ99453 314 aa12.57□□□□□ -0.4
HMGB1P32-201ENST00000425971 TTC13Q8NBP0 860 aa12.56□□□□□ -0.4
HMGB1P32-201ENST00000425971 ADAM33Q9BZ11 813 aa12.56□□□□□ -0.4
HMGB1P32-201ENST00000425971 RBM27Q9P2N5 1060 aaKnown RBP12.56□□□□□ -0.4
HMGB1P32-201ENST00000425971 PADI6Q6TGC4 694 aa12.55□□□□□ -0.4
HMGB1P32-201ENST00000425971 CLCN1P35523 988 aa12.54□□□□□ -0.4
HMGB1P32-201ENST00000425971 METTL3Q86U44 580 aaKnown RBP12.53□□□□□ -0.4
HMGB1P32-201ENST00000425971 GOPCQ9HD26 462 aa12.53□□□□□ -0.4
HMGB1P32-201ENST00000425971 GPCPD1Q9NPB8 672 aa12.53□□□□□ -0.4
HMGB1P32-201ENST00000425971 ADGRG1Q9Y653 693 aa12.53□□□□□ -0.4
HMGB1P32-201ENST00000425971 MDM2Q00987 491 aaPredicted RBP12.52□□□□□ -0.41
HMGB1P32-201ENST00000425971 OATP04181 439 aa12.51□□□□□ -0.41
HMGB1P32-201ENST00000425971 LCE2DQ5TA82 110 aaPredicted RBP12.51□□□□□ -0.41
HMGB1P32-201ENST00000425971 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
HMGB1P32-201ENST00000425971 FAM161AQ3B820 660 aa12.5□□□□□ -0.41
HMGB1P32-201ENST00000425971 PXYLP1Q8TE99 480 aa12.5□□□□□ -0.41
HMGB1P32-201ENST00000425971 ZNF710Q8N1W2 664 aa12.49□□□□□ -0.41
HMGB1P32-201ENST00000425971 ST18O60284 1047 aa12.48□□□□□ -0.41
HMGB1P32-201ENST00000425971 PRSS12P56730 875 aa12.48□□□□□ -0.41
HMGB1P32-201ENST00000425971 PSDA5PKW4 1024 aaPredicted RBP12.46□□□□□ -0.41
HMGB1P32-201ENST00000425971 PPP4R3BQ5MIZ7 849 aa12.46□□□□□ -0.41
HMGB1P32-201ENST00000425971 BCL2L12Q9HB09 334 aa12.46□□□□□ -0.41
HMGB1P32-201ENST00000425971 CDCA7LQ96GN5 454 aa12.45□□□□□ -0.42
HMGB1P32-201ENST00000425971 FAM217BQ9NTX9 383 aaPredicted RBP12.45□□□□□ -0.42
HMGB1P32-201ENST00000425971 SSTR3P32745 418 aaPredicted RBP12.44□□□□□ -0.42
HMGB1P32-201ENST00000425971 COL9A1P20849 921 aa12.43□□□□□ -0.42
HMGB1P32-201ENST00000425971 SH3D19Q5HYK7 790 aa12.43□□□□□ -0.42
HMGB1P32-201ENST00000425971 NLRP7Q8WX94 980 aa12.43□□□□□ -0.42
HMGB1P32-201ENST00000425971 FAM198AQ9UFP1 575 aa12.43□□□□□ -0.42
HMGB1P32-201ENST00000425971 POTEMA6NI47 508 aa12.41□□□□□ -0.42
HMGB1P32-201ENST00000425971 HOXB1P14653 301 aaPredicted RBP12.41□□□□□ -0.42
HMGB1P32-201ENST00000425971 POTEGQ6S5H5 508 aa12.41□□□□□ -0.42
HMGB1P32-201ENST00000425971 PPP1R3GB7ZBB8 358 aa12.4□□□□□ -0.42
HMGB1P32-201ENST00000425971 RBM46Q8TBY0 533 aaKnown RBP12.4□□□□□ -0.42
HMGB1P32-201ENST00000425971 PCMTD1Q96MG8 357 aaPredicted RBP12.4□□□□□ -0.42
HMGB1P32-201ENST00000425971 BEGAINQ9BUH8 593 aa12.39□□□□□ -0.43
HMGB1P32-201ENST00000425971 PTPREP23469 700 aa12.37□□□□□ -0.43
HMGB1P32-201ENST00000425971 TSKSQ9UJT2 592 aa12.37□□□□□ -0.43
HMGB1P32-201ENST00000425971 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.36□□□□□ -0.43
HMGB1P32-201ENST00000425971 ONECUT3O60422 494 aaPredicted RBP12.36□□□□□ -0.43
HMGB1P32-201ENST00000425971 MARVELD3Q96A59 401 aa12.36□□□□□ -0.43
HMGB1P32-201ENST00000425971 EYA1Q99502 592 aa12.36□□□□□ -0.43
HMGB1P32-201ENST00000425971 RSPH6AQ9H0K4 717 aa12.36□□□□□ -0.43
HMGB1P32-201ENST00000425971 SKIV2LQ15477 1246 aaKnown RBP12.35□□□□□ -0.43
HMGB1P32-201ENST00000425971 ZMYND15Q9H091 742 aa12.35□□□□□ -0.43
HMGB1P32-201ENST00000425971 RCCD1A6NED2 376 aa12.33□□□□□ -0.44
HMGB1P32-201ENST00000425971 C3orf80F5H4A9 247 aa12.33□□□□□ -0.44
HMGB1P32-201ENST00000425971 SUPT5HO00267 1087 aaKnown RBP12.33□□□□□ -0.44
HMGB1P32-201ENST00000425971 EMP3P54852 163 aa12.33□□□□□ -0.44
HMGB1P32-201ENST00000425971 TRIM6-TRIM34B2RNG4 842 aa12.32□□□□□ -0.44
HMGB1P32-201ENST00000425971 FLIIQ13045 1269 aa12.32□□□□□ -0.44
HMGB1P32-201ENST00000425971 NBPF26B4DH59 902 aa12.3□□□□□ -0.44
HMGB1P32-201ENST00000425971 MYSM1Q5VVJ2 828 aa12.3□□□□□ -0.44
HMGB1P32-201ENST00000425971 NUDT18Q6ZVK8 323 aa12.29□□□□□ -0.44
HMGB1P32-201ENST00000425971 TATDN2Q93075 761 aa12.29□□□□□ -0.44
HMGB1P32-201ENST00000425971 DNAJB2P25686 324 aa12.28□□□□□ -0.44
HMGB1P32-201ENST00000425971 ARXQ96QS3 562 aa12.28□□□□□ -0.44
HMGB1P32-201ENST00000425971 PROCA1Q8NCQ7 364 aaPredicted RBP12.27□□□□□ -0.45
HMGB1P32-201ENST00000425971 TBC1D2Q9BYX2 928 aa12.27□□□□□ -0.45
HMGB1P32-201ENST00000425971 PNMA3Q9UL41 463 aa12.27□□□□□ -0.45
HMGB1P32-201ENST00000425971 CD46P15529 392 aa12.26□□□□□ -0.45
HMGB1P32-201ENST00000425971 PROX2Q3B8N5 592 aa12.26□□□□□ -0.45
HMGB1P32-201ENST00000425971 PACS2Q86VP3 889 aa12.26□□□□□ -0.45
HMGB1P32-201ENST00000425971 KCNK17Q96T54 332 aa12.26□□□□□ -0.45
HMGB1P32-201ENST00000425971 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.26□□□□□ -0.45
HMGB1P32-201ENST00000425971 TMEM134Q9H6X4 195 aa12.26□□□□□ -0.45
HMGB1P32-201ENST00000425971 CLK2P49760 499 aaKnown RBP12.25□□□□□ -0.45
HMGB1P32-201ENST00000425971 DIXDC1Q155Q3 683 aa12.25□□□□□ -0.45
HMGB1P32-201ENST00000425971 FAM205CA6NFA0 338 aa12.24□□□□□ -0.45
HMGB1P32-201ENST00000425971 POLR3EQ9NVU0 708 aa12.24□□□□□ -0.45
HMGB1P32-201ENST00000425971 SULF1Q8IWU6 871 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms