RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 TTLL12Q14166 644 aaPredicted RBP9.48□□□□□ -0.89
LINC00400-201ENST00000425609 GIGYF2Q6Y7W6 1299 aaKnown RBP9.48□□□□□ -0.89
LINC00400-201ENST00000425609 RBM33Q96EV2 1170 aaKnown RBP9.48□□□□□ -0.89
LINC00400-201ENST00000425609 TMUB1Q9BVT8 246 aa9.48□□□□□ -0.89
LINC00400-201ENST00000425609 MS4A1P11836 297 aa9.47□□□□□ -0.89
LINC00400-201ENST00000425609 FBXW7Q969H0 707 aa9.47□□□□□ -0.89
LINC00400-201ENST00000425609 FOSBP53539 338 aa9.46□□□□□ -0.9
LINC00400-201ENST00000425609 ARXQ96QS3 562 aa9.45□□□□□ -0.9
LINC00400-201ENST00000425609 PHOX2BQ99453 314 aa9.45□□□□□ -0.9
LINC00400-201ENST00000425609 GOPCQ9HD26 462 aa9.45□□□□□ -0.9
LINC00400-201ENST00000425609 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
LINC00400-201ENST00000425609 SUPT5HO00267 1087 aaKnown RBP9.41□□□□□ -0.9
LINC00400-201ENST00000425609 HOXB3P14651 431 aaPredicted RBP9.41□□□□□ -0.9
LINC00400-201ENST00000425609 CLCN1P35523 988 aa9.41□□□□□ -0.9
LINC00400-201ENST00000425609 GPCPD1Q9NPB8 672 aa9.41□□□□□ -0.9
LINC00400-201ENST00000425609 MDM2Q00987 491 aaPredicted RBP9.4□□□□□ -0.9
LINC00400-201ENST00000425609 C6orf132Q5T0Z8 1188 aa9.4□□□□□ -0.9
LINC00400-201ENST00000425609 TTC13Q8NBP0 860 aa9.4□□□□□ -0.9
LINC00400-201ENST00000425609 CERKQ8TCT0 537 aa9.4□□□□□ -0.9
LINC00400-201ENST00000425609 ZDHHC16Q969W1 377 aa9.4□□□□□ -0.9
LINC00400-201ENST00000425609 PADI6Q6TGC4 694 aa9.39□□□□□ -0.91
LINC00400-201ENST00000425609 METTL3Q86U44 580 aaKnown RBP9.39□□□□□ -0.91
LINC00400-201ENST00000425609 KHSRPQ92945 711 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC00400-201ENST00000425609 NUDT7P0C024 238 aa9.38□□□□□ -0.91
LINC00400-201ENST00000425609 DOK7Q18PE1 504 aa9.38□□□□□ -0.91
LINC00400-201ENST00000425609 FAM161AQ3B820 660 aa9.38□□□□□ -0.91
LINC00400-201ENST00000425609 ZNF454Q8N9F8 522 aa9.38□□□□□ -0.91
LINC00400-201ENST00000425609 ZMYND15Q9H091 742 aa9.38□□□□□ -0.91
LINC00400-201ENST00000425609 RBM27Q9P2N5 1060 aaKnown RBP9.38□□□□□ -0.91
LINC00400-201ENST00000425609 ADGRG1Q9Y653 693 aa9.38□□□□□ -0.91
LINC00400-201ENST00000425609 ARSIQ5FYB1 569 aa9.37□□□□□ -0.91
LINC00400-201ENST00000425609 GPR153Q6NV75 609 aa9.37□□□□□ -0.91
LINC00400-201ENST00000425609 PXYLP1Q8TE99 480 aa9.37□□□□□ -0.91
LINC00400-201ENST00000425609 ADAM33Q9BZ11 813 aa9.37□□□□□ -0.91
LINC00400-201ENST00000425609 POTEB2H3BUK9 544 aa9.36□□□□□ -0.91
LINC00400-201ENST00000425609 ONECUT3O60422 494 aaPredicted RBP9.36□□□□□ -0.91
LINC00400-201ENST00000425609 OATP04181 439 aa9.36□□□□□ -0.91
LINC00400-201ENST00000425609 SH3D19Q5HYK7 790 aa9.36□□□□□ -0.91
LINC00400-201ENST00000425609 ZSWIM6Q9HCJ5 1215 aa9.36□□□□□ -0.91
LINC00400-201ENST00000425609 SSTR3P32745 418 aaPredicted RBP9.35□□□□□ -0.91
LINC00400-201ENST00000425609 FAM217BQ9NTX9 383 aaPredicted RBP9.35□□□□□ -0.91
LINC00400-201ENST00000425609 NLRP7Q8WX94 980 aa9.34□□□□□ -0.91
LINC00400-201ENST00000425609 RIMBP2O15034 1052 aa9.32□□□□□ -0.92
LINC00400-201ENST00000425609 PRSS12P56730 875 aa9.32□□□□□ -0.92
LINC00400-201ENST00000425609 PCMTD1Q96MG8 357 aaPredicted RBP9.32□□□□□ -0.92
LINC00400-201ENST00000425609 RSPH6AQ9H0K4 717 aa9.32□□□□□ -0.92
LINC00400-201ENST00000425609 FLIIQ13045 1269 aa9.31□□□□□ -0.92
LINC00400-201ENST00000425609 BEGAINQ9BUH8 593 aa9.31□□□□□ -0.92
LINC00400-201ENST00000425609 HOMEZQ8IX15 550 aa9.3□□□□□ -0.92
LINC00400-201ENST00000425609 CDCA7LQ96GN5 454 aa9.3□□□□□ -0.92
LINC00400-201ENST00000425609 FAM198AQ9UFP1 575 aa9.3□□□□□ -0.92
LINC00400-201ENST00000425609 LHX6Q9UPM6 363 aa9.3□□□□□ -0.92
LINC00400-201ENST00000425609 SKIV2LQ15477 1246 aaKnown RBP9.29□□□□□ -0.92
LINC00400-201ENST00000425609 COL9A1P20849 921 aa9.28□□□□□ -0.92
LINC00400-201ENST00000425609 RBM46Q8TBY0 533 aaKnown RBP9.27□□□□□ -0.93
LINC00400-201ENST00000425609 BCL2L12Q9HB09 334 aa9.27□□□□□ -0.93
LINC00400-201ENST00000425609 SCUBE2Q9NQ36 999 aa9.27□□□□□ -0.93
LINC00400-201ENST00000425609 PPP4R3BQ5MIZ7 849 aa9.26□□□□□ -0.93
LINC00400-201ENST00000425609 ZNF710Q8N1W2 664 aa9.26□□□□□ -0.93
LINC00400-201ENST00000425609 PSDA5PKW4 1024 aaPredicted RBP9.25□□□□□ -0.93
LINC00400-201ENST00000425609 MYSM1Q5VVJ2 828 aa9.25□□□□□ -0.93
LINC00400-201ENST00000425609 EYA1Q99502 592 aa9.25□□□□□ -0.93
LINC00400-201ENST00000425609 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.25□□□□□ -0.93
LINC00400-201ENST00000425609 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.24□□□□□ -0.93
LINC00400-201ENST00000425609 PPP1R3GB7ZBB8 358 aa9.24□□□□□ -0.93
LINC00400-201ENST00000425609 MCM6Q14566 821 aa9.24□□□□□ -0.93
LINC00400-201ENST00000425609 MAMSTRQ6ZN01 415 aa9.24□□□□□ -0.93
LINC00400-201ENST00000425609 PROCA1Q8NCQ7 364 aaPredicted RBP9.24□□□□□ -0.93
LINC00400-201ENST00000425609 TSKSQ9UJT2 592 aa9.24□□□□□ -0.93
LINC00400-201ENST00000425609 C3orf80F5H4A9 247 aa9.23□□□□□ -0.93
LINC00400-201ENST00000425609 RCCD1A6NED2 376 aa9.22□□□□□ -0.93
LINC00400-201ENST00000425609 LHX8Q68G74 356 aa9.22□□□□□ -0.93
LINC00400-201ENST00000425609 C1orf115Q9H7X2 142 aa9.22□□□□□ -0.93
LINC00400-201ENST00000425609 POLR3EQ9NVU0 708 aa9.22□□□□□ -0.93
LINC00400-201ENST00000425609 PTPREP23469 700 aa9.21□□□□□ -0.94
LINC00400-201ENST00000425609 TBC1D2Q9BYX2 928 aa9.21□□□□□ -0.94
LINC00400-201ENST00000425609 HOXB1P14653 301 aaPredicted RBP9.2□□□□□ -0.94
LINC00400-201ENST00000425609 CLK2P49760 499 aaKnown RBP9.2□□□□□ -0.94
LINC00400-201ENST00000425609 A6NJR5 290 aa9.19□□□□□ -0.94
LINC00400-201ENST00000425609 TRIM6-TRIM34B2RNG4 842 aa9.19□□□□□ -0.94
LINC00400-201ENST00000425609 CD46P15529 392 aa9.19□□□□□ -0.94
LINC00400-201ENST00000425609 DIXDC1Q155Q3 683 aa9.18□□□□□ -0.94
LINC00400-201ENST00000425609 NUDT18Q6ZVK8 323 aa9.18□□□□□ -0.94
LINC00400-201ENST00000425609 CLUAP1Q96AJ1 413 aa9.18□□□□□ -0.94
LINC00400-201ENST00000425609 NBPF26B4DH59 902 aa9.17□□□□□ -0.94
LINC00400-201ENST00000425609 DNAJB2P25686 324 aa9.17□□□□□ -0.94
LINC00400-201ENST00000425609 FBXO31Q5XUX0 539 aaPredicted RBP9.17□□□□□ -0.94
LINC00400-201ENST00000425609 LIMD1Q9UGP4 676 aa9.17□□□□□ -0.94
LINC00400-201ENST00000425609 SNPHO15079 494 aa9.16□□□□□ -0.94
LINC00400-201ENST00000425609 SPIRE2Q8WWL2 714 aa9.16□□□□□ -0.94
LINC00400-201ENST00000425609 TATDN2Q93075 761 aa9.16□□□□□ -0.94
LINC00400-201ENST00000425609 TMEM134Q9H6X4 195 aa9.16□□□□□ -0.94
LINC00400-201ENST00000425609 UBTFP17480 764 aaKnown RBP9.15□□□□□ -0.94
LINC00400-201ENST00000425609 PNMA3Q9UL41 463 aa9.15□□□□□ -0.94
LINC00400-201ENST00000425609 ARID3CA6NKF2 412 aa9.14□□□□□ -0.95
LINC00400-201ENST00000425609 TUSC1Q2TAM9 212 aa9.14□□□□□ -0.95
LINC00400-201ENST00000425609 PROX2Q3B8N5 592 aa9.14□□□□□ -0.95
LINC00400-201ENST00000425609 SULF1Q8IWU6 871 aa9.14□□□□□ -0.95
LINC00400-201ENST00000425609 TRAK2O60296 914 aa9.13□□□□□ -0.95
LINC00400-201ENST00000425609 RFC5P40937 340 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms