RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 ARIH1Q9Y4X5 557 aaPredicted RBP6.53□□□□□ -1.36
PMS1-209ENST00000424059 KCTD12Q96CX2 325 aaKnown RBP6.52□□□□□ -1.37
PMS1-209ENST00000424059 DPYSL4O14531 572 aa6.52□□□□□ -1.37
PMS1-209ENST00000424059 GOLGA8CPA6NN73 597 aa6.51□□□□□ -1.37
PMS1-209ENST00000424059 MRPL50Q8N5N7 158 aaKnown RBP6.51□□□□□ -1.37
PMS1-209ENST00000424059 PDIA6Q15084 440 aa6.5□□□□□ -1.37
PMS1-209ENST00000424059 PLA2G2EQ9NZK7 142 aa6.5□□□□□ -1.37
PMS1-209ENST00000424059 RABGEF1Q9UJ41 708 aa6.5□□□□□ -1.37
PMS1-209ENST00000424059 LAPTM4BQ86VI4 370 aa6.5□□□□□ -1.37
PMS1-209ENST00000424059 E2F4Q16254 413 aa6.49□□□□□ -1.37
PMS1-209ENST00000424059 PAXIP1Q6ZW49 1069 aaPredicted RBP6.49□□□□□ -1.37
PMS1-209ENST00000424059 WDR70Q9NW82 654 aa6.49□□□□□ -1.37
PMS1-209ENST00000424059 THSD4Q6ZMP0 1018 aa6.48□□□□□ -1.37
PMS1-209ENST00000424059 WNT2BQ93097 391 aa6.47□□□□□ -1.37
PMS1-209ENST00000424059 CFAP44Q96MT7 982 aa6.47□□□□□ -1.37
PMS1-209ENST00000424059 C6orf132Q5T0Z8 1188 aa6.47□□□□□ -1.37
PMS1-209ENST00000424059 IFFO2Q5TF58 517 aa6.47□□□□□ -1.37
PMS1-209ENST00000424059 COL9A1P20849 921 aa6.46□□□□□ -1.38
PMS1-209ENST00000424059 EN1Q05925 392 aaPredicted RBP6.45□□□□□ -1.38
PMS1-209ENST00000424059 ANKK1Q8NFD2 765 aa6.45□□□□□ -1.38
PMS1-209ENST00000424059 TRIM6-TRIM34B2RNG4 842 aa6.44□□□□□ -1.38
PMS1-209ENST00000424059 CERKQ8TCT0 537 aa6.44□□□□□ -1.38
PMS1-209ENST00000424059 PROX2Q3B8N5 592 aa6.43□□□□□ -1.38
PMS1-209ENST00000424059 RGS20O76081 388 aa6.43□□□□□ -1.38
PMS1-209ENST00000424059 NBR1Q14596 966 aa6.43□□□□□ -1.38
PMS1-209ENST00000424059 NYAP1Q6ZVC0 841 aa6.43□□□□□ -1.38
PMS1-209ENST00000424059 DDX12PQ92771 950 aa6.43□□□□□ -1.38
PMS1-209ENST00000424059 PTPN5P54829 565 aa6.42□□□□□ -1.38
PMS1-209ENST00000424059 KIAA1468Q9P260 1216 aa6.42□□□□□ -1.38
PMS1-209ENST00000424059 MAP3K7O43318 606 aa6.41□□□□□ -1.38
PMS1-209ENST00000424059 FAM98CQ17RN3 349 aaKnown RBP6.41□□□□□ -1.38
PMS1-209ENST00000424059 RBM33Q96EV2 1170 aaKnown RBP6.41□□□□□ -1.38
PMS1-209ENST00000424059 SOWAHBA6NEL2 793 aa6.4□□□□□ -1.38
PMS1-209ENST00000424059 PACS2Q86VP3 889 aa6.4□□□□□ -1.38
PMS1-209ENST00000424059 RBM27Q9P2N5 1060 aaKnown RBP6.39□□□□□ -1.39
PMS1-209ENST00000424059 ZFRQ96KR1 1074 aaKnown RBP6.38□□□□□ -1.39
PMS1-209ENST00000424059 PRSS12P56730 875 aa6.37□□□□□ -1.39
PMS1-209ENST00000424059 ITGBL1O95965 494 aaPredicted RBP6.37□□□□□ -1.39
PMS1-209ENST00000424059 TSR1Q2NL82 804 aaKnown RBP6.37□□□□□ -1.39
PMS1-209ENST00000424059 ARHGEF1Q92888 912 aaKnown RBP6.37□□□□□ -1.39
PMS1-209ENST00000424059 A0A0G2JS52 829 aa6.36□□□□□ -1.39
PMS1-209ENST00000424059 NBPF26B4DH59 902 aa6.36□□□□□ -1.39
PMS1-209ENST00000424059 LRCH3Q96II8 777 aa6.36□□□□□ -1.39
PMS1-209ENST00000424059 OSBPP22059 807 aa6.35□□□□□ -1.39
PMS1-209ENST00000424059 CDCA7LQ96GN5 454 aa6.35□□□□□ -1.39
PMS1-209ENST00000424059 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.35□□□□□ -1.39
PMS1-209ENST00000424059 TSR3Q9UJK0 312 aaKnown RBP6.35□□□□□ -1.39
PMS1-209ENST00000424059 GRXCR2A6NFK2 248 aa6.35□□□□□ -1.39
PMS1-209ENST00000424059 BCAMP50895 628 aa6.35□□□□□ -1.39
PMS1-209ENST00000424059 SEPT9Q9UHD8 586 aaPredicted RBP6.35□□□□□ -1.39
PMS1-209ENST00000424059 TSKSQ9UJT2 592 aa6.35□□□□□ -1.39
PMS1-209ENST00000424059 NECTIN2Q92692 538 aa6.33□□□□□ -1.4
PMS1-209ENST00000424059 PRIM1P49642 420 aaKnown RBP6.32□□□□□ -1.4
PMS1-209ENST00000424059 P3H3Q8IVL6 736 aa6.32□□□□□ -1.4
PMS1-209ENST00000424059 TSHZ2Q9NRE2 1034 aa6.32□□□□□ -1.4
PMS1-209ENST00000424059 HPS5Q9UPZ3 1129 aa6.32□□□□□ -1.4
PMS1-209ENST00000424059 TTC13Q8NBP0 860 aa6.31□□□□□ -1.4
PMS1-209ENST00000424059 TATDN2Q93075 761 aa6.31□□□□□ -1.4
PMS1-209ENST00000424059 WBP1LQ9NX94 342 aa6.3□□□□□ -1.4
PMS1-209ENST00000424059 CDHR5Q9HBB8 845 aa6.3□□□□□ -1.4
PMS1-209ENST00000424059 FAM198AQ9UFP1 575 aa6.3□□□□□ -1.4
PMS1-209ENST00000424059 PNMA3Q9UL41 463 aa6.3□□□□□ -1.4
PMS1-209ENST00000424059 PPP4CP60510 307 aa6.29□□□□□ -1.4
PMS1-209ENST00000424059 KCNC4Q03721 635 aa6.29□□□□□ -1.4
PMS1-209ENST00000424059 HDGFP51858 240 aaKnown RBP6.28□□□□□ -1.4
PMS1-209ENST00000424059 KCNV2Q8TDN2 545 aa6.28□□□□□ -1.4
PMS1-209ENST00000424059 SAMD7Q7Z3H4 446 aa6.27□□□□□ -1.41
PMS1-209ENST00000424059 SLC4A3P48751 1232 aa6.26□□□□□ -1.41
PMS1-209ENST00000424059 PADI6Q6TGC4 694 aa6.26□□□□□ -1.41
PMS1-209ENST00000424059 NUDT18Q6ZVK8 323 aa6.26□□□□□ -1.41
PMS1-209ENST00000424059 SLF2Q8IX21 1173 aa6.26□□□□□ -1.41
PMS1-209ENST00000424059 NPDC1Q9NQX5 325 aaPredicted RBP6.26□□□□□ -1.41
PMS1-209ENST00000424059 SMAPO00193 183 aa6.25□□□□□ -1.41
PMS1-209ENST00000424059 MLLT3P42568 568 aaPredicted RBP6.23□□□□□ -1.41
PMS1-209ENST00000424059 PLCB2Q00722 1185 aa6.23□□□□□ -1.41
PMS1-209ENST00000424059 PRR14Q9BWN1 585 aa6.23□□□□□ -1.41
PMS1-209ENST00000424059 IL21Q9HBE4 155 aa6.23□□□□□ -1.41
PMS1-209ENST00000424059 IRX2Q9BZI1 471 aaPredicted RBP6.23□□□□□ -1.41
PMS1-209ENST00000424059 C3orf80F5H4A9 247 aa6.22□□□□□ -1.41
PMS1-209ENST00000424059 PTGDRQ13258 359 aa6.22□□□□□ -1.41
PMS1-209ENST00000424059 EYA1Q99502 592 aa6.22□□□□□ -1.41
PMS1-209ENST00000424059 TJAP1Q5JTD0 557 aa6.21□□□□□ -1.41
PMS1-209ENST00000424059 DNAJB2P25686 324 aa6.21□□□□□ -1.42
PMS1-209ENST00000424059 SWT1Q5T5J6 900 aaKnown RBP6.21□□□□□ -1.42
PMS1-209ENST00000424059 RBM46Q8TBY0 533 aaKnown RBP6.21□□□□□ -1.42
PMS1-209ENST00000424059 FCHSD2O94868 740 aa6.2□□□□□ -1.42
PMS1-209ENST00000424059 SMYD5Q6GMV2 418 aa6.2□□□□□ -1.42
PMS1-209ENST00000424059 MTRQ99707 1265 aa6.2□□□□□ -1.42
PMS1-209ENST00000424059 ADGRG1Q9Y653 693 aa6.19□□□□□ -1.42
PMS1-209ENST00000424059 NUTM2FA1L443 756 aa6.18□□□□□ -1.42
PMS1-209ENST00000424059 RNF40O75150 1001 aa6.18□□□□□ -1.42
PMS1-209ENST00000424059 APLP1P51693 650 aa6.18□□□□□ -1.42
PMS1-209ENST00000424059 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.17□□□□□ -1.42
PMS1-209ENST00000424059 TESPA1A2RU30 521 aaPredicted RBP6.16□□□□□ -1.42
PMS1-209ENST00000424059 LAPTM4AQ15012 233 aa6.16□□□□□ -1.42
PMS1-209ENST00000424059 TMEM134Q9H6X4 195 aa6.16□□□□□ -1.42
PMS1-209ENST00000424059 GGCXP38435 758 aa6.16□□□□□ -1.42
PMS1-209ENST00000424059 SEMA3EO15041 775 aa6.15□□□□□ -1.42
PMS1-209ENST00000424059 OATP04181 439 aa6.15□□□□□ -1.42
PMS1-209ENST00000424059 HIC1Q14526 733 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms