RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
LINC00397-201ENST00000422074 KCNH8Q96L42 1107 aa10.87□□□□□ -0.67
LINC00397-201ENST00000422074 EN1Q05925 392 aaPredicted RBP10.85□□□□□ -0.67
LINC00397-201ENST00000422074 ADGRD1Q6QNK2 874 aa10.85□□□□□ -0.67
LINC00397-201ENST00000422074 HRO43593 1189 aa10.84□□□□□ -0.67
LINC00397-201ENST00000422074 OSBPP22059 807 aa10.84□□□□□ -0.67
LINC00397-201ENST00000422074 PPP1R3GB7ZBB8 358 aa10.83□□□□□ -0.68
LINC00397-201ENST00000422074 NBR1Q14596 966 aa10.83□□□□□ -0.68
LINC00397-201ENST00000422074 C6orf132Q5T0Z8 1188 aa10.83□□□□□ -0.68
LINC00397-201ENST00000422074 ZBED2Q9BTP6 218 aa10.83□□□□□ -0.68
LINC00397-201ENST00000422074 VPS9D1Q9Y2B5 631 aa10.82□□□□□ -0.68
LINC00397-201ENST00000422074 GRXCR2A6NFK2 248 aa10.81□□□□□ -0.68
LINC00397-201ENST00000422074 COL9A1P20849 921 aa10.81□□□□□ -0.68
LINC00397-201ENST00000422074 PRIM1P49642 420 aaKnown RBP10.81□□□□□ -0.68
LINC00397-201ENST00000422074 MLLT3P42568 568 aaPredicted RBP10.78□□□□□ -0.68
LINC00397-201ENST00000422074 RBM33Q96EV2 1170 aaKnown RBP10.78□□□□□ -0.68
LINC00397-201ENST00000422074 MYT1LQ9UL68 1186 aa10.78□□□□□ -0.68
LINC00397-201ENST00000422074 BHMG1C9JSJ3 638 aaPredicted RBP10.77□□□□□ -0.69
LINC00397-201ENST00000422074 ONECUT3O60422 494 aaPredicted RBP10.77□□□□□ -0.69
LINC00397-201ENST00000422074 MAP3K7O43318 606 aa10.76□□□□□ -0.69
LINC00397-201ENST00000422074 TSR1Q2NL82 804 aaKnown RBP10.76□□□□□ -0.69
LINC00397-201ENST00000422074 SEMA3EO15041 775 aa10.75□□□□□ -0.69
LINC00397-201ENST00000422074 TESPA1A2RU30 521 aaPredicted RBP10.74□□□□□ -0.69
LINC00397-201ENST00000422074 CERKQ8TCT0 537 aa10.74□□□□□ -0.69
LINC00397-201ENST00000422074 RNF166Q96A37 237 aaPredicted RBP10.72□□□□□ -0.69
LINC00397-201ENST00000422074 RABGEF1Q9UJ41 708 aa10.72□□□□□ -0.69
LINC00397-201ENST00000422074 PROX2Q3B8N5 592 aa10.71□□□□□ -0.69
LINC00397-201ENST00000422074 NPDC1Q9NQX5 325 aaPredicted RBP10.7□□□□□ -0.7
LINC00397-201ENST00000422074 TRIM6-TRIM34B2RNG4 842 aa10.69□□□□□ -0.7
LINC00397-201ENST00000422074 CDHR5Q9HBB8 845 aa10.68□□□□□ -0.7
LINC00397-201ENST00000422074 RBM27Q9P2N5 1060 aaKnown RBP10.68□□□□□ -0.7
LINC00397-201ENST00000422074 PRSS12P56730 875 aa10.67□□□□□ -0.7
LINC00397-201ENST00000422074 NBPF3Q9H094 633 aa10.67□□□□□ -0.7
LINC00397-201ENST00000422074 SMYD5Q6GMV2 418 aa10.66□□□□□ -0.7
LINC00397-201ENST00000422074 KIAA1468Q9P260 1216 aa10.66□□□□□ -0.7
LINC00397-201ENST00000422074 TSKSQ9UJT2 592 aa10.66□□□□□ -0.7
LINC00397-201ENST00000422074 LAPTM4BQ86VI4 370 aa10.65□□□□□ -0.7
LINC00397-201ENST00000422074 CDCA7LQ96GN5 454 aa10.65□□□□□ -0.7
LINC00397-201ENST00000422074 STAC3Q96MF2 364 aa10.65□□□□□ -0.7
LINC00397-201ENST00000422074 MRPL50Q8N5N7 158 aaKnown RBP10.64□□□□□ -0.71
LINC00397-201ENST00000422074 TTC13Q8NBP0 860 aa10.64□□□□□ -0.71
LINC00397-201ENST00000422074 PTGDRQ13258 359 aa10.63□□□□□ -0.71
LINC00397-201ENST00000422074 FAM198AQ9UFP1 575 aa10.63□□□□□ -0.71
LINC00397-201ENST00000422074 PACS2Q86VP3 889 aa10.62□□□□□ -0.71
LINC00397-201ENST00000422074 FAM98CQ17RN3 349 aaKnown RBP10.58□□□□□ -0.72
LINC00397-201ENST00000422074 RBM26Q5T8P6 1007 aaKnown RBP10.58□□□□□ -0.72
LINC00397-201ENST00000422074 NUTM2FA1L443 756 aa10.57□□□□□ -0.72
LINC00397-201ENST00000422074 HCSTQ9UBK5 93 aa10.57□□□□□ -0.72
LINC00397-201ENST00000422074 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
LINC00397-201ENST00000422074 FCHSD2O94868 740 aa10.56□□□□□ -0.72
LINC00397-201ENST00000422074 PADI6Q6TGC4 694 aa10.56□□□□□ -0.72
LINC00397-201ENST00000422074 KCTD12Q96CX2 325 aaKnown RBP10.56□□□□□ -0.72
LINC00397-201ENST00000422074 GOLGA8CPA6NN73 597 aa10.55□□□□□ -0.72
LINC00397-201ENST00000422074 THSD4Q6ZMP0 1018 aa10.55□□□□□ -0.72
LINC00397-201ENST00000422074 TATDN2Q93075 761 aa10.55□□□□□ -0.72
LINC00397-201ENST00000422074 WNT2BQ93097 391 aa10.55□□□□□ -0.72
LINC00397-201ENST00000422074 ZFRQ96KR1 1074 aaKnown RBP10.55□□□□□ -0.72
LINC00397-201ENST00000422074 SEPT9Q9UHD8 586 aaPredicted RBP10.55□□□□□ -0.72
LINC00397-201ENST00000422074 NBPF26B4DH59 902 aa10.54□□□□□ -0.72
LINC00397-201ENST00000422074 GPR37O15354 613 aa10.54□□□□□ -0.72
LINC00397-201ENST00000422074 HIC1Q14526 733 aa10.52□□□□□ -0.73
LINC00397-201ENST00000422074 ANKK1Q8NFD2 765 aa10.52□□□□□ -0.73
LINC00397-201ENST00000422074 SOWAHBA6NEL2 793 aa10.51□□□□□ -0.73
LINC00397-201ENST00000422074 NUDT18Q6ZVK8 323 aa10.51□□□□□ -0.73
LINC00397-201ENST00000422074 EYA1Q99502 592 aa10.51□□□□□ -0.73
LINC00397-201ENST00000422074 PNMA3Q9UL41 463 aa10.51□□□□□ -0.73
LINC00397-201ENST00000422074 SLC24A1O60721 1099 aa10.5□□□□□ -0.73
LINC00397-201ENST00000422074 SMAPO00193 183 aa10.49□□□□□ -0.73
LINC00397-201ENST00000422074 TULP1O00294 542 aaPredicted RBP10.49□□□□□ -0.73
LINC00397-201ENST00000422074 ADGRG1Q9Y653 693 aa10.48□□□□□ -0.73
LINC00397-201ENST00000422074 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
LINC00397-201ENST00000422074 GNPATO15228 680 aa10.46□□□□□ -0.73
LINC00397-201ENST00000422074 GPIHBP1Q8IV16 184 aa10.46□□□□□ -0.73
LINC00397-201ENST00000422074 BCAMP50895 628 aa10.45□□□□□ -0.74
LINC00397-201ENST00000422074 LRCH3Q96II8 777 aa10.45□□□□□ -0.74
LINC00397-201ENST00000422074 PTPN5P54829 565 aa10.44□□□□□ -0.74
LINC00397-201ENST00000422074 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.44□□□□□ -0.74
LINC00397-201ENST00000422074 FECHP22830 423 aa10.43□□□□□ -0.74
LINC00397-201ENST00000422074 SAMD7Q7Z3H4 446 aa10.43□□□□□ -0.74
LINC00397-201ENST00000422074 RBM46Q8TBY0 533 aaKnown RBP10.43□□□□□ -0.74
LINC00397-201ENST00000422074 NYAP1Q6ZVC0 841 aa10.42□□□□□ -0.74
LINC00397-201ENST00000422074 OATP04181 439 aa10.41□□□□□ -0.74
LINC00397-201ENST00000422074 TSR3Q9UJK0 312 aaKnown RBP10.41□□□□□ -0.74
LINC00397-201ENST00000422074 PXYLP1Q8TE99 480 aa10.4□□□□□ -0.74
LINC00397-201ENST00000422074 DNAJB2P25686 324 aa10.39□□□□□ -0.75
LINC00397-201ENST00000422074 HDGFP51858 240 aaKnown RBP10.39□□□□□ -0.75
LINC00397-201ENST00000422074 WBP1LQ9NX94 342 aa10.39□□□□□ -0.75
LINC00397-201ENST00000422074 FAM161AQ3B820 660 aa10.38□□□□□ -0.75
LINC00397-201ENST00000422074 LMOD2Q6P5Q4 547 aa10.38□□□□□ -0.75
LINC00397-201ENST00000422074 METTL3Q86U44 580 aaKnown RBP10.38□□□□□ -0.75
LINC00397-201ENST00000422074 TMEM134Q9H6X4 195 aa10.38□□□□□ -0.75
LINC00397-201ENST00000422074 HPS5Q9UPZ3 1129 aa10.38□□□□□ -0.75
LINC00397-201ENST00000422074 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.37□□□□□ -0.75
LINC00397-201ENST00000422074 RCCD1A6NED2 376 aa10.37□□□□□ -0.75
LINC00397-201ENST00000422074 SWT1Q5T5J6 900 aaKnown RBP10.37□□□□□ -0.75
LINC00397-201ENST00000422074 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
LINC00397-201ENST00000422074 PPP4CP60510 307 aa10.34□□□□□ -0.75
LINC00397-201ENST00000422074 SLF2Q8IX21 1173 aa10.34□□□□□ -0.75
LINC00397-201ENST00000422074 NECTIN2Q92692 538 aa10.34□□□□□ -0.75
LINC00397-201ENST00000422074 MAP2K5Q13163 448 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms