RNA–Protein interactions for RNA: ENST00000421014.2

CCDC18-204, Transcript of coiled-coil domain containing 18, humanhuman

TSL 5

Gene CCDC18, Length 606 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-204ENST00000421014 DCAF8L2P0C7V8 631 aa12.18□□□□□ -0.46
CCDC18-204ENST00000421014 TYW1BQ6NUM6 668 aa12.18□□□□□ -0.46
CCDC18-204ENST00000421014 FBXW7Q969H0 707 aa12.17□□□□□ -0.46
CCDC18-204ENST00000421014 PHF14O94880 888 aa12.16□□□□□ -0.46
CCDC18-204ENST00000421014 KIAA1468Q9P260 1216 aa12.16□□□□□ -0.46
CCDC18-204ENST00000421014 CADPS2Q86UW7 1296 aa12.15□□□□□ -0.46
CCDC18-204ENST00000421014 SOWAHBA6NEL2 793 aa12.13□□□□□ -0.47
CCDC18-204ENST00000421014 LAPTM4BQ86VI4 370 aa12.13□□□□□ -0.47
CCDC18-204ENST00000421014 ZFRQ96KR1 1074 aaKnown RBP12.13□□□□□ -0.47
CCDC18-204ENST00000421014 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
CCDC18-204ENST00000421014 SEPT9Q9UHD8 586 aaPredicted RBP12.12□□□□□ -0.47
CCDC18-204ENST00000421014 C6orf132Q5T0Z8 1188 aa12.11□□□□□ -0.47
CCDC18-204ENST00000421014 WBP1LQ9NX94 342 aa12.11□□□□□ -0.47
CCDC18-204ENST00000421014 RBM33Q96EV2 1170 aaKnown RBP12.08□□□□□ -0.48
CCDC18-204ENST00000421014 DPYSL4O14531 572 aa12.07□□□□□ -0.48
CCDC18-204ENST00000421014 EPAS1Q99814 870 aa12.07□□□□□ -0.48
CCDC18-204ENST00000421014 KCNC4Q03721 635 aa12.06□□□□□ -0.48
CCDC18-204ENST00000421014 NYAP1Q6ZVC0 841 aa12.06□□□□□ -0.48
CCDC18-204ENST00000421014 ONECUT3O60422 494 aaPredicted RBP12.05□□□□□ -0.48
CCDC18-204ENST00000421014 TRIM6-TRIM34B2RNG4 842 aa12.04□□□□□ -0.48
CCDC18-204ENST00000421014 Q6ZNB5 142 aa12.04□□□□□ -0.48
CCDC18-204ENST00000421014 DDX12PQ92771 950 aa12.03□□□□□ -0.48
CCDC18-204ENST00000421014 CAMK2BQ13554 666 aa12.02□□□□□ -0.49
CCDC18-204ENST00000421014 FAM98CQ17RN3 349 aaKnown RBP12.02□□□□□ -0.49
CCDC18-204ENST00000421014 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.02□□□□□ -0.49
CCDC18-204ENST00000421014 HPS5Q9UPZ3 1129 aa12.02□□□□□ -0.49
CCDC18-204ENST00000421014 LRCH3Q96II8 777 aa12□□□□□ -0.49
CCDC18-204ENST00000421014 TSR3Q9UJK0 312 aaKnown RBP12□□□□□ -0.49
CCDC18-204ENST00000421014 NBR1Q14596 966 aa11.95□□□□□ -0.5
CCDC18-204ENST00000421014 MAP3K7O43318 606 aa11.94□□□□□ -0.5
CCDC18-204ENST00000421014 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
CCDC18-204ENST00000421014 PACS2Q86VP3 889 aa11.94□□□□□ -0.5
CCDC18-204ENST00000421014 TSKSQ9UJT2 592 aa11.94□□□□□ -0.5
CCDC18-204ENST00000421014 PPP4CP60510 307 aa11.92□□□□□ -0.5
CCDC18-204ENST00000421014 EN1Q05925 392 aaPredicted RBP11.91□□□□□ -0.5
CCDC18-204ENST00000421014 SMAPO00193 183 aa11.9□□□□□ -0.5
CCDC18-204ENST00000421014 GFRA3O60609 400 aa11.87□□□□□ -0.51
CCDC18-204ENST00000421014 SAMD7Q7Z3H4 446 aa11.87□□□□□ -0.51
CCDC18-204ENST00000421014 CDCA7LQ96GN5 454 aa11.85□□□□□ -0.51
CCDC18-204ENST00000421014 LAPTM4AQ15012 233 aa11.84□□□□□ -0.51
CCDC18-204ENST00000421014 PDIA6Q15084 440 aa11.84□□□□□ -0.51
CCDC18-204ENST00000421014 TJAP1Q5JTD0 557 aa11.84□□□□□ -0.51
CCDC18-204ENST00000421014 PRSS12P56730 875 aa11.83□□□□□ -0.52
CCDC18-204ENST00000421014 FAM198AQ9UFP1 575 aa11.83□□□□□ -0.52
CCDC18-204ENST00000421014 PRKD2Q9BZL6 878 aa11.82□□□□□ -0.52
CCDC18-204ENST00000421014 C3orf80F5H4A9 247 aa11.81□□□□□ -0.52
CCDC18-204ENST00000421014 PNMA3Q9UL41 463 aa11.81□□□□□ -0.52
CCDC18-204ENST00000421014 GRXCR2A6NFK2 248 aa11.8□□□□□ -0.52
CCDC18-204ENST00000421014 SPDYE16A6NNV3 312 aaPredicted RBP11.8□□□□□ -0.52
CCDC18-204ENST00000421014 LCE2BO14633 110 aa11.8□□□□□ -0.52
CCDC18-204ENST00000421014 TRAF7Q6Q0C0 670 aa11.8□□□□□ -0.52
CCDC18-204ENST00000421014 MTRQ99707 1265 aa11.8□□□□□ -0.52
CCDC18-204ENST00000421014 RNF40O75150 1001 aa11.79□□□□□ -0.52
CCDC18-204ENST00000421014 PRIM1P49642 420 aaKnown RBP11.79□□□□□ -0.52
CCDC18-204ENST00000421014 TATDN2Q93075 761 aa11.79□□□□□ -0.52
CCDC18-204ENST00000421014 PPP1R18Q6NYC8 613 aa11.78□□□□□ -0.52
CCDC18-204ENST00000421014 IL21Q9HBE4 155 aa11.78□□□□□ -0.52
CCDC18-204ENST00000421014 NBPF26B4DH59 902 aa11.76□□□□□ -0.53
CCDC18-204ENST00000421014 CERKQ8TCT0 537 aa11.76□□□□□ -0.53
CCDC18-204ENST00000421014 ZNF516Q92618 1163 aa11.76□□□□□ -0.53
CCDC18-204ENST00000421014 BBXQ8WY36 941 aaPredicted RBP11.75□□□□□ -0.53
CCDC18-204ENST00000421014 HDGFP51858 240 aaKnown RBP11.74□□□□□ -0.53
CCDC18-204ENST00000421014 NUDT18Q6ZVK8 323 aa11.73□□□□□ -0.53
CCDC18-204ENST00000421014 CDHR5Q9HBB8 845 aa11.73□□□□□ -0.53
CCDC18-204ENST00000421014 E2F4Q16254 413 aa11.72□□□□□ -0.53
CCDC18-204ENST00000421014 NRG2O14511 850 aaPredicted RBP11.71□□□□□ -0.53
CCDC18-204ENST00000421014 APLP1P51693 650 aa11.71□□□□□ -0.53
CCDC18-204ENST00000421014 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.71□□□□□ -0.53
CCDC18-204ENST00000421014 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
CCDC18-204ENST00000421014 V9GY48 417 aaPredicted RBP11.69□□□□□ -0.54
CCDC18-204ENST00000421014 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
CCDC18-204ENST00000421014 OSBPP22059 807 aa11.67□□□□□ -0.54
CCDC18-204ENST00000421014 WDR70Q9NW82 654 aa11.67□□□□□ -0.54
CCDC18-204ENST00000421014 COPS2P61201 443 aa11.66□□□□□ -0.54
CCDC18-204ENST00000421014 SWT1Q5T5J6 900 aaKnown RBP11.64□□□□□ -0.55
CCDC18-204ENST00000421014 PDZRN3Q9UPQ7 1066 aa11.64□□□□□ -0.55
CCDC18-204ENST00000421014 PADI6Q6TGC4 694 aa11.62□□□□□ -0.55
CCDC18-204ENST00000421014 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
CCDC18-204ENST00000421014 ARIH1Q9Y4X5 557 aaPredicted RBP11.62□□□□□ -0.55
CCDC18-204ENST00000421014 GGCXP38435 758 aa11.61□□□□□ -0.55
CCDC18-204ENST00000421014 ZNF787Q6DD87 383 aa11.6□□□□□ -0.55
CCDC18-204ENST00000421014 SLF2Q8IX21 1173 aa11.6□□□□□ -0.55
CCDC18-204ENST00000421014 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
CCDC18-204ENST00000421014 NECTIN2Q92692 538 aa11.59□□□□□ -0.55
CCDC18-204ENST00000421014 CFAP44Q96MT7 982 aa11.58□□□□□ -0.56
CCDC18-204ENST00000421014 NPDC1Q9NQX5 325 aaPredicted RBP11.58□□□□□ -0.56
CCDC18-204ENST00000421014 TTC13Q8NBP0 860 aa11.57□□□□□ -0.56
CCDC18-204ENST00000421014 ZPR1O75312 459 aa11.56□□□□□ -0.56
CCDC18-204ENST00000421014 PAXIP1Q6ZW49 1069 aaPredicted RBP11.55□□□□□ -0.56
CCDC18-204ENST00000421014 SLC4A3P48751 1232 aa11.54□□□□□ -0.56
CCDC18-204ENST00000421014 TMUB1Q9BVT8 246 aa11.53□□□□□ -0.56
CCDC18-204ENST00000421014 PCDHB3Q9Y5E6 796 aa11.53□□□□□ -0.56
CCDC18-204ENST00000421014 EYA1Q99502 592 aa11.51□□□□□ -0.57
CCDC18-204ENST00000421014 BLOC1S3Q6QNY0 202 aa11.49□□□□□ -0.57
CCDC18-204ENST00000421014 RNF223E7ERA6 249 aa11.48□□□□□ -0.57
CCDC18-204ENST00000421014 SLC19A1P41440 591 aa11.48□□□□□ -0.57
CCDC18-204ENST00000421014 PRR14Q9BWN1 585 aa11.48□□□□□ -0.57
CCDC18-204ENST00000421014 ZNF775Q96BV0 537 aaPredicted RBP11.47□□□□□ -0.57
CCDC18-204ENST00000421014 TLL1O43897 1013 aa11.46□□□□□ -0.57
CCDC18-204ENST00000421014 TRIM67Q6ZTA4 783 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms