RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 GPR37O15354 613 aa9.67□□□□□ -0.86
TTC39DP-201ENST00000416781 FBXW7Q969H0 707 aa9.67□□□□□ -0.86
TTC39DP-201ENST00000416781 HOXB1P14653 301 aaPredicted RBP9.66□□□□□ -0.86
TTC39DP-201ENST00000416781 BARGINQ6ZT62 677 aa9.66□□□□□ -0.86
TTC39DP-201ENST00000416781 LHX6Q9UPM6 363 aa9.66□□□□□ -0.86
TTC39DP-201ENST00000416781 FCHSD2O94868 740 aa9.65□□□□□ -0.86
TTC39DP-201ENST00000416781 SLC24A3Q9HC58 644 aa9.65□□□□□ -0.86
TTC39DP-201ENST00000416781 ZDHHC16Q969W1 377 aa9.64□□□□□ -0.87
TTC39DP-201ENST00000416781 CDHR5Q9HBB8 845 aa9.64□□□□□ -0.87
TTC39DP-201ENST00000416781 TSR1Q2NL82 804 aaKnown RBP9.63□□□□□ -0.87
TTC39DP-201ENST00000416781 KRI1Q8N9T8 703 aaKnown RBP9.63□□□□□ -0.87
TTC39DP-201ENST00000416781 PSDA5PKW4 1024 aaPredicted RBP9.62□□□□□ -0.87
TTC39DP-201ENST00000416781 PTGDRQ13258 359 aa9.62□□□□□ -0.87
TTC39DP-201ENST00000416781 HIC1Q14526 733 aa9.62□□□□□ -0.87
TTC39DP-201ENST00000416781 HS3ST6Q96QI5 342 aa9.62□□□□□ -0.87
TTC39DP-201ENST00000416781 PPP4R3BQ5MIZ7 849 aa9.61□□□□□ -0.87
TTC39DP-201ENST00000416781 GNPATO15228 680 aa9.61□□□□□ -0.87
TTC39DP-201ENST00000416781 ADAM33Q9BZ11 813 aa9.61□□□□□ -0.87
TTC39DP-201ENST00000416781 RNF166Q96A37 237 aaPredicted RBP9.59□□□□□ -0.87
TTC39DP-201ENST00000416781 FAM205CA6NFA0 338 aa9.58□□□□□ -0.88
TTC39DP-201ENST00000416781 MAP2K5Q13163 448 aa9.58□□□□□ -0.88
TTC39DP-201ENST00000416781 C6orf132Q5T0Z8 1188 aa9.58□□□□□ -0.88
TTC39DP-201ENST00000416781 AK7Q96M32 723 aa9.57□□□□□ -0.88
TTC39DP-201ENST00000416781 NPDC1Q9NQX5 325 aaPredicted RBP9.57□□□□□ -0.88
TTC39DP-201ENST00000416781 FECHP22830 423 aa9.55□□□□□ -0.88
TTC39DP-201ENST00000416781 MINK1Q8N4C8 1332 aaPredicted RBP9.55□□□□□ -0.88
TTC39DP-201ENST00000416781 CERKQ8TCT0 537 aa9.55□□□□□ -0.88
TTC39DP-201ENST00000416781 BCL2L12Q9HB09 334 aa9.55□□□□□ -0.88
TTC39DP-201ENST00000416781 CCDC102AQ96A19 550 aa9.54□□□□□ -0.88
TTC39DP-201ENST00000416781 ERBB3P21860 1342 aa9.54□□□□□ -0.88
TTC39DP-201ENST00000416781 PTPREP23469 700 aa9.52□□□□□ -0.89
TTC39DP-201ENST00000416781 POTEB3A0JP26 581 aa9.51□□□□□ -0.89
TTC39DP-201ENST00000416781 IRF6O14896 467 aa9.51□□□□□ -0.89
TTC39DP-201ENST00000416781 POTEBQ6S5H4 581 aa9.51□□□□□ -0.89
TTC39DP-201ENST00000416781 NEUROD2Q15784 382 aa9.51□□□□□ -0.89
TTC39DP-201ENST00000416781 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
TTC39DP-201ENST00000416781 BRPF1P55201 1214 aaPredicted RBP9.5□□□□□ -0.89
TTC39DP-201ENST00000416781 PADI6Q6TGC4 694 aa9.5□□□□□ -0.89
TTC39DP-201ENST00000416781 PPP1R3GB7ZBB8 358 aa9.49□□□□□ -0.89
TTC39DP-201ENST00000416781 TRIM66O15016 1216 aa9.49□□□□□ -0.89
TTC39DP-201ENST00000416781 COL9A1P20849 921 aa9.49□□□□□ -0.89
TTC39DP-201ENST00000416781 KCNH8Q96L42 1107 aa9.49□□□□□ -0.89
TTC39DP-201ENST00000416781 KCNK17Q96T54 332 aa9.49□□□□□ -0.89
TTC39DP-201ENST00000416781 RBM27Q9P2N5 1060 aaKnown RBP9.48□□□□□ -0.89
TTC39DP-201ENST00000416781 PRSS12P56730 875 aa9.48□□□□□ -0.89
TTC39DP-201ENST00000416781 CDCA7LQ96GN5 454 aa9.47□□□□□ -0.89
TTC39DP-201ENST00000416781 PDE4DQ08499 809 aa9.46□□□□□ -0.89
TTC39DP-201ENST00000416781 MYT1LQ9UL68 1186 aa9.46□□□□□ -0.89
TTC39DP-201ENST00000416781 ARXQ96QS3 562 aa9.45□□□□□ -0.9
TTC39DP-201ENST00000416781 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
TTC39DP-201ENST00000416781 TTC13Q8NBP0 860 aa9.44□□□□□ -0.9
TTC39DP-201ENST00000416781 AMHR2Q16671 573 aa9.43□□□□□ -0.9
TTC39DP-201ENST00000416781 FAM161AQ3B820 660 aa9.43□□□□□ -0.9
TTC39DP-201ENST00000416781 GPBP1L1Q9HC44 474 aaPredicted RBP9.43□□□□□ -0.9
TTC39DP-201ENST00000416781 PSEN2P49810 448 aa9.42□□□□□ -0.9
TTC39DP-201ENST00000416781 ADGRG1Q9Y653 693 aa9.42□□□□□ -0.9
TTC39DP-201ENST00000416781 ARHGAP33O14559 1287 aa9.42□□□□□ -0.9
TTC39DP-201ENST00000416781 OATP04181 439 aa9.42□□□□□ -0.9
TTC39DP-201ENST00000416781 PBX2P40425 430 aa9.42□□□□□ -0.9
TTC39DP-201ENST00000416781 TTLL12Q14166 644 aaPredicted RBP9.42□□□□□ -0.9
TTC39DP-201ENST00000416781 TRIM6-TRIM34B2RNG4 842 aa9.41□□□□□ -0.9
TTC39DP-201ENST00000416781 ZNF687Q8N1G0 1237 aa9.41□□□□□ -0.9
TTC39DP-201ENST00000416781 FAM198AQ9UFP1 575 aa9.41□□□□□ -0.9
TTC39DP-201ENST00000416781 TSKSQ9UJT2 592 aa9.41□□□□□ -0.9
TTC39DP-201ENST00000416781 AXIN2Q9Y2T1 843 aa9.41□□□□□ -0.9
TTC39DP-201ENST00000416781 PROX2Q3B8N5 592 aa9.4□□□□□ -0.9
TTC39DP-201ENST00000416781 METTL3Q86U44 580 aaKnown RBP9.4□□□□□ -0.9
TTC39DP-201ENST00000416781 POTEEQ6S8J3 1075 aa9.39□□□□□ -0.91
TTC39DP-201ENST00000416781 PARP9Q8IXQ6 854 aa9.39□□□□□ -0.91
TTC39DP-201ENST00000416781 KDM4CQ9H3R0 1056 aa9.39□□□□□ -0.91
TTC39DP-201ENST00000416781 NBPF26B4DH59 902 aa9.39□□□□□ -0.91
TTC39DP-201ENST00000416781 PACS2Q86VP3 889 aa9.39□□□□□ -0.91
TTC39DP-201ENST00000416781 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
TTC39DP-201ENST00000416781 PXYLP1Q8TE99 480 aa9.39□□□□□ -0.91
TTC39DP-201ENST00000416781 ZBED2Q9BTP6 218 aa9.39□□□□□ -0.91
TTC39DP-201ENST00000416781 PHOX2BQ99453 314 aa9.38□□□□□ -0.91
TTC39DP-201ENST00000416781 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
TTC39DP-201ENST00000416781 CLCN1P35523 988 aa9.36□□□□□ -0.91
TTC39DP-201ENST00000416781 MDM2Q00987 491 aaPredicted RBP9.36□□□□□ -0.91
TTC39DP-201ENST00000416781 NUDT18Q6ZVK8 323 aa9.36□□□□□ -0.91
TTC39DP-201ENST00000416781 PNMA3Q9UL41 463 aa9.36□□□□□ -0.91
TTC39DP-201ENST00000416781 ONECUT3O60422 494 aaPredicted RBP9.36□□□□□ -0.91
TTC39DP-201ENST00000416781 NLRP7Q8WX94 980 aa9.36□□□□□ -0.91
TTC39DP-201ENST00000416781 TMEM132AQ24JP5 1023 aa9.35□□□□□ -0.91
TTC39DP-201ENST00000416781 TATDN2Q93075 761 aa9.35□□□□□ -0.91
TTC39DP-201ENST00000416781 GPCPD1Q9NPB8 672 aa9.35□□□□□ -0.91
TTC39DP-201ENST00000416781 GIGYF2Q6Y7W6 1299 aaKnown RBP9.34□□□□□ -0.91
TTC39DP-201ENST00000416781 KIAA1468Q9P260 1216 aa9.34□□□□□ -0.91
TTC39DP-201ENST00000416781 C3orf80F5H4A9 247 aa9.33□□□□□ -0.92
TTC39DP-201ENST00000416781 SMAPO00193 183 aa9.33□□□□□ -0.92
TTC39DP-201ENST00000416781 EYA1Q99502 592 aa9.33□□□□□ -0.92
TTC39DP-201ENST00000416781 SLC4A5Q9BY07 1137 aa9.33□□□□□ -0.92
TTC39DP-201ENST00000416781 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.32□□□□□ -0.92
TTC39DP-201ENST00000416781 REPIN1Q9BWE0 567 aaKnown RBP9.32□□□□□ -0.92
TTC39DP-201ENST00000416781 RABGEF1Q9UJ41 708 aa9.32□□□□□ -0.92
TTC39DP-201ENST00000416781 RCCD1A6NED2 376 aa9.32□□□□□ -0.92
TTC39DP-201ENST00000416781 VPS9D1Q9Y2B5 631 aa9.31□□□□□ -0.92
TTC39DP-201ENST00000416781 DNAJB2P25686 324 aa9.3□□□□□ -0.92
TTC39DP-201ENST00000416781 TMUB1Q9BVT8 246 aa9.3□□□□□ -0.92
TTC39DP-201ENST00000416781 LSM11P83369 360 aaKnown RBP eCLIP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms