RNA–Protein interactions for RNA: ENST00000416135.5

RAD50-202, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-202ENST00000416135 DPYSL4O14531 572 aa13.36□□□□□ -0.27
RAD50-202ENST00000416135 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
RAD50-202ENST00000416135 C6orf132Q5T0Z8 1188 aa13.31□□□□□ -0.28
RAD50-202ENST00000416135 A0A0G2JS52 829 aa13.29□□□□□ -0.28
RAD50-202ENST00000416135 BCAMP50895 628 aa13.29□□□□□ -0.28
RAD50-202ENST00000416135 KIAA1468Q9P260 1216 aa13.29□□□□□ -0.28
RAD50-202ENST00000416135 EPAS1Q99814 870 aa13.28□□□□□ -0.28
RAD50-202ENST00000416135 ANKK1Q8NFD2 765 aa13.26□□□□□ -0.29
RAD50-202ENST00000416135 LAPTM4BQ86VI4 370 aa13.25□□□□□ -0.29
RAD50-202ENST00000416135 BBXQ8WY36 941 aaPredicted RBP13.25□□□□□ -0.29
RAD50-202ENST00000416135 DDX12PQ92771 950 aa13.25□□□□□ -0.29
RAD50-202ENST00000416135 SOWAHBA6NEL2 793 aa13.24□□□□□ -0.29
RAD50-202ENST00000416135 RBM33Q96EV2 1170 aaKnown RBP13.24□□□□□ -0.29
RAD50-202ENST00000416135 ZFRQ96KR1 1074 aaKnown RBP13.24□□□□□ -0.29
RAD50-202ENST00000416135 SEPT9Q9UHD8 586 aaPredicted RBP13.24□□□□□ -0.29
RAD50-202ENST00000416135 ONECUT3O60422 494 aaPredicted RBP13.23□□□□□ -0.29
RAD50-202ENST00000416135 TRIM6-TRIM34B2RNG4 842 aa13.22□□□□□ -0.29
RAD50-202ENST00000416135 ITGBL1O95965 494 aaPredicted RBP13.22□□□□□ -0.29
RAD50-202ENST00000416135 RGS20O76081 388 aa13.21□□□□□ -0.29
RAD50-202ENST00000416135 PDIA6Q15084 440 aa13.2□□□□□ -0.3
RAD50-202ENST00000416135 TSR1Q2NL82 804 aaKnown RBP13.19□□□□□ -0.3
RAD50-202ENST00000416135 WBP1LQ9NX94 342 aa13.19□□□□□ -0.3
RAD50-202ENST00000416135 EN1Q05925 392 aaPredicted RBP13.18□□□□□ -0.3
RAD50-202ENST00000416135 PRIM1P49642 420 aaKnown RBP13.17□□□□□ -0.3
RAD50-202ENST00000416135 TSKSQ9UJT2 592 aa13.16□□□□□ -0.3
RAD50-202ENST00000416135 NBR1Q14596 966 aa13.15□□□□□ -0.3
RAD50-202ENST00000416135 FAM98CQ17RN3 349 aaKnown RBP13.15□□□□□ -0.3
RAD50-202ENST00000416135 MAP3K7O43318 606 aa13.11□□□□□ -0.31
RAD50-202ENST00000416135 NYAP1Q6ZVC0 841 aa13.11□□□□□ -0.31
RAD50-202ENST00000416135 FAM198AQ9UFP1 575 aa13.11□□□□□ -0.31
RAD50-202ENST00000416135 C3orf80F5H4A9 247 aa13.1□□□□□ -0.31
RAD50-202ENST00000416135 SPRYD3Q8NCJ5 442 aa13.1□□□□□ -0.31
RAD50-202ENST00000416135 SPDYE16A6NNV3 312 aaPredicted RBP13.08□□□□□ -0.32
RAD50-202ENST00000416135 IRX2Q9BZI1 471 aaPredicted RBP13.08□□□□□ -0.32
RAD50-202ENST00000416135 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.07□□□□□ -0.32
RAD50-202ENST00000416135 TSR3Q9UJK0 312 aaKnown RBP13.07□□□□□ -0.32
RAD50-202ENST00000416135 HPS5Q9UPZ3 1129 aa13.07□□□□□ -0.32
RAD50-202ENST00000416135 ARIH1Q9Y4X5 557 aaPredicted RBP13.07□□□□□ -0.32
RAD50-202ENST00000416135 LRCH3Q96II8 777 aa13.06□□□□□ -0.32
RAD50-202ENST00000416135 E2F4Q16254 413 aa13.05□□□□□ -0.32
RAD50-202ENST00000416135 SMAPO00193 183 aa13.04□□□□□ -0.32
RAD50-202ENST00000416135 CDCA7LQ96GN5 454 aa13.04□□□□□ -0.32
RAD50-202ENST00000416135 KCNC4Q03721 635 aa13.03□□□□□ -0.32
RAD50-202ENST00000416135 PACS2Q86VP3 889 aa13.03□□□□□ -0.32
RAD50-202ENST00000416135 PRSS12P56730 875 aa13.02□□□□□ -0.33
RAD50-202ENST00000416135 CDHR5Q9HBB8 845 aa13.01□□□□□ -0.33
RAD50-202ENST00000416135 OSBPP22059 807 aa13□□□□□ -0.33
RAD50-202ENST00000416135 GRXCR2A6NFK2 248 aa12.99□□□□□ -0.33
RAD50-202ENST00000416135 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
RAD50-202ENST00000416135 SAMD7Q7Z3H4 446 aa12.98□□□□□ -0.33
RAD50-202ENST00000416135 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.98□□□□□ -0.33
RAD50-202ENST00000416135 RTN4Q9NQC3 1192 aaKnown RBP12.97□□□□□ -0.33
RAD50-202ENST00000416135 CFAP44Q96MT7 982 aa12.96□□□□□ -0.33
RAD50-202ENST00000416135 TJAP1Q5JTD0 557 aa12.94□□□□□ -0.34
RAD50-202ENST00000416135 CERKQ8TCT0 537 aa12.94□□□□□ -0.34
RAD50-202ENST00000416135 TATDN2Q93075 761 aa12.94□□□□□ -0.34
RAD50-202ENST00000416135 PPP4CP60510 307 aa12.93□□□□□ -0.34
RAD50-202ENST00000416135 AMER1Q5JTC6 1135 aaPredicted RBP12.92□□□□□ -0.34
RAD50-202ENST00000416135 PNMA3Q9UL41 463 aa12.92□□□□□ -0.34
RAD50-202ENST00000416135 NBPF26B4DH59 902 aa12.9□□□□□ -0.34
RAD50-202ENST00000416135 TTC13Q8NBP0 860 aa12.9□□□□□ -0.34
RAD50-202ENST00000416135 NPDC1Q9NQX5 325 aaPredicted RBP12.9□□□□□ -0.34
RAD50-202ENST00000416135 WDR70Q9NW82 654 aa12.89□□□□□ -0.35
RAD50-202ENST00000416135 NUDT18Q6ZVK8 323 aa12.88□□□□□ -0.35
RAD50-202ENST00000416135 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
RAD50-202ENST00000416135 MTRQ99707 1265 aa12.87□□□□□ -0.35
RAD50-202ENST00000416135 LCE2BO14633 110 aa12.84□□□□□ -0.35
RAD50-202ENST00000416135 APLP1P51693 650 aa12.84□□□□□ -0.35
RAD50-202ENST00000416135 PADI6Q6TGC4 694 aa12.83□□□□□ -0.36
RAD50-202ENST00000416135 ZNF516Q92618 1163 aa12.83□□□□□ -0.36
RAD50-202ENST00000416135 IL21Q9HBE4 155 aa12.81□□□□□ -0.36
RAD50-202ENST00000416135 Q6ZNB5 142 aa12.8□□□□□ -0.36
RAD50-202ENST00000416135 RNF40O75150 1001 aa12.78□□□□□ -0.36
RAD50-202ENST00000416135 MLLT3P42568 568 aaPredicted RBP12.78□□□□□ -0.36
RAD50-202ENST00000416135 SWT1Q5T5J6 900 aaKnown RBP12.78□□□□□ -0.36
RAD50-202ENST00000416135 PPP1R18Q6NYC8 613 aa12.78□□□□□ -0.36
RAD50-202ENST00000416135 NKX2-3Q8TAU0 364 aa12.76□□□□□ -0.37
RAD50-202ENST00000416135 EYA1Q99502 592 aa12.76□□□□□ -0.37
RAD50-202ENST00000416135 PRKD2Q9BZL6 878 aa12.75□□□□□ -0.37
RAD50-202ENST00000416135 TSHZ2Q9NRE2 1034 aa12.73□□□□□ -0.37
RAD50-202ENST00000416135 KCNV2Q8TDN2 545 aa12.72□□□□□ -0.37
RAD50-202ENST00000416135 GFRA3O60609 400 aa12.7□□□□□ -0.38
RAD50-202ENST00000416135 HDGFP51858 240 aaKnown RBP12.69□□□□□ -0.38
RAD50-202ENST00000416135 COPS2P61201 443 aa12.69□□□□□ -0.38
RAD50-202ENST00000416135 SLF2Q8IX21 1173 aa12.69□□□□□ -0.38
RAD50-202ENST00000416135 ARHGEF1Q92888 912 aaKnown RBP12.69□□□□□ -0.38
RAD50-202ENST00000416135 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.69□□□□□ -0.38
RAD50-202ENST00000416135 LAPTM4AQ15012 233 aa12.68□□□□□ -0.38
RAD50-202ENST00000416135 V9GY48 417 aaPredicted RBP12.67□□□□□ -0.38
RAD50-202ENST00000416135 PTGDRQ13258 359 aa12.66□□□□□ -0.38
RAD50-202ENST00000416135 NRG2O14511 850 aaPredicted RBP12.62□□□□□ -0.39
RAD50-202ENST00000416135 ZPR1O75312 459 aa12.62□□□□□ -0.39
RAD50-202ENST00000416135 NECTIN2Q92692 538 aa12.62□□□□□ -0.39
RAD50-202ENST00000416135 ADGRG1Q9Y653 693 aa12.62□□□□□ -0.39
RAD50-202ENST00000416135 TRAF7Q6Q0C0 670 aa12.61□□□□□ -0.39
RAD50-202ENST00000416135 FAM161AQ3B820 660 aa12.6□□□□□ -0.39
RAD50-202ENST00000416135 EMID1Q96A84 441 aaPredicted RBP12.6□□□□□ -0.39
RAD50-202ENST00000416135 BLOC1S3Q6QNY0 202 aa12.59□□□□□ -0.39
RAD50-202ENST00000416135 TMEM134Q9H6X4 195 aa12.59□□□□□ -0.39
RAD50-202ENST00000416135 DNAJB2P25686 324 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms