RNA–Protein interactions for RNA: ENST00000413366.7

PRKCA-202, Transcript of protein kinase C alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCA, Length 8,751 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-202ENST00000413366 FBXW7Q969H0 707 aa9.48□□□□□ -0.89
PRKCA-202ENST00000413366 NOL10Q9BSC4 688 aaKnown RBP9.48□□□□□ -0.89
PRKCA-202ENST00000413366 SYTL4Q96C24 671 aaPredicted RBP9.48□□□□□ -0.89
PRKCA-202ENST00000413366 NOC3LQ8WTT2 800 aaKnown RBP9.47□□□□□ -0.89
PRKCA-202ENST00000413366 PKD2Q13563 968 aa9.47□□□□□ -0.89
PRKCA-202ENST00000413366 IPO8O15397 1037 aaKnown RBP9.47□□□□□ -0.89
PRKCA-202ENST00000413366 HSCBQ8IWL3 235 aa9.47□□□□□ -0.89
PRKCA-202ENST00000413366 HNRNPMP52272 730 aaKnown RBP eCLIP9.47□□□□□ -0.892e-6■■■■□ 23
PRKCA-202ENST00000413366 FMN1Q68DA7 1419 aa9.47□□□□□ -0.89
PRKCA-202ENST00000413366 TCEAL9Q9UHQ7 104 aa9.47□□□□□ -0.89
PRKCA-202ENST00000413366 CCDC18Q5T9S5 1454 aa9.46□□□□□ -0.9
PRKCA-202ENST00000413366 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.46□□□□□ -0.92e-6■■■■□ 19.9
PRKCA-202ENST00000413366 AMOTL1Q8IY63 956 aa9.46□□□□□ -0.9
PRKCA-202ENST00000413366 NUP155O75694 1391 aa9.46□□□□□ -0.9
PRKCA-202ENST00000413366 APBB1O00213 710 aa9.46□□□□□ -0.9
PRKCA-202ENST00000413366 PRDM2Q13029 1718 aa9.46□□□□□ -0.9
PRKCA-202ENST00000413366 FAM43AQ8N2R8 423 aa9.45□□□□□ -0.9
PRKCA-202ENST00000413366 PSME1Q06323 249 aa9.45□□□□□ -0.9
PRKCA-202ENST00000413366 ARID3AQ99856 593 aa9.45□□□□□ -0.9
PRKCA-202ENST00000413366 APPP05067 770 aa9.45□□□□□ -0.9
PRKCA-202ENST00000413366 U2AF1L5P0DN76 240 aaPredicted RBP9.45□□□□□ -0.9
PRKCA-202ENST00000413366 U2AF1Q01081 240 aaKnown RBP eCLIP9.45□□□□□ -0.9
PRKCA-202ENST00000413366 KTN1Q86UP2 1357 aaKnown RBP9.45□□□□□ -0.9
PRKCA-202ENST00000413366 MARCH6O60337 910 aa9.45□□□□□ -0.9
PRKCA-202ENST00000413366 CNKSR2Q8WXI2 1034 aa9.44□□□□□ -0.9
PRKCA-202ENST00000413366 WASHC2AQ641Q2 1341 aa9.44□□□□□ -0.9
PRKCA-202ENST00000413366 TTC5Q8N0Z6 440 aa9.44□□□□□ -0.9
PRKCA-202ENST00000413366 UACAQ9BZF9 1416 aa9.44□□□□□ -0.9
PRKCA-202ENST00000413366 HSP90B1P14625 803 aaKnown RBP9.44□□□□□ -0.9
PRKCA-202ENST00000413366 RSPH4AQ5TD94 716 aa9.44□□□□□ -0.9
PRKCA-202ENST00000413366 TPM2P07951 284 aa9.43□□□□□ -0.9
PRKCA-202ENST00000413366 RGS3P49796 1198 aa9.43□□□□□ -0.9
PRKCA-202ENST00000413366 LMOD3Q0VAK6 560 aa9.43□□□□□ -0.9
PRKCA-202ENST00000413366 HMGB1P09429 215 aaKnown RBP9.43□□□□□ -0.9
PRKCA-202ENST00000413366 RASSF8Q8NHQ8 419 aa9.43□□□□□ -0.9
PRKCA-202ENST00000413366 TOMM22Q9NS69 142 aa9.42□□□□□ -0.9
PRKCA-202ENST00000413366 RAD21O60216 631 aa9.42□□□□□ -0.9
PRKCA-202ENST00000413366 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
PRKCA-202ENST00000413366 PPP1R1BQ9UD71 204 aaPredicted RBP9.41□□□□□ -0.9
PRKCA-202ENST00000413366 ABCC8Q09428 1581 aa9.41□□□□□ -0.9
PRKCA-202ENST00000413366 TCERG1O14776 1098 aaKnown RBP9.41□□□□□ -0.9
PRKCA-202ENST00000413366 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.41□□□□□ -0.9
PRKCA-202ENST00000413366 GBP4Q96PP9 640 aa9.41□□□□□ -0.9
PRKCA-202ENST00000413366 ITPRIPQ8IWB1 547 aa9.4□□□□□ -0.9
PRKCA-202ENST00000413366 VPS37DQ86XT2 251 aa9.4□□□□□ -0.9
PRKCA-202ENST00000413366 COG3Q96JB2 828 aa9.4□□□□□ -0.9
PRKCA-202ENST00000413366 SIN3AQ96ST3 1273 aa9.4□□□□□ -0.9
PRKCA-202ENST00000413366 PTPRGP23470 1445 aa9.4□□□□□ -0.91
PRKCA-202ENST00000413366 SYAP1Q96A49 352 aaPredicted RBP9.4□□□□□ -0.91
PRKCA-202ENST00000413366 PDIA4P13667 645 aaKnown RBP9.39□□□□□ -0.91
PRKCA-202ENST00000413366 HTATSF1O43719 755 aaKnown RBP9.39□□□□□ -0.91
PRKCA-202ENST00000413366 SLC4A10Q6U841 1118 aa9.39□□□□□ -0.91
PRKCA-202ENST00000413366 RBM33Q96EV2 1170 aaKnown RBP9.39□□□□□ -0.91
PRKCA-202ENST00000413366 CCDC34Q96HJ3 373 aa9.39□□□□□ -0.91
PRKCA-202ENST00000413366 CADPSQ9ULU8 1353 aa9.39□□□□□ -0.91
PRKCA-202ENST00000413366 CCDC88BA6NC98 1476 aa9.38□□□□□ -0.91
PRKCA-202ENST00000413366 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.38□□□□□ -0.91
PRKCA-202ENST00000413366 CCDC66A2RUB6 948 aa9.38□□□□□ -0.91
PRKCA-202ENST00000413366 HMMRO75330 724 aa9.38□□□□□ -0.91
PRKCA-202ENST00000413366 TRIM6-TRIM34B2RNG4 842 aa9.37□□□□□ -0.91
PRKCA-202ENST00000413366 FANCD2Q9BXW9 1451 aa9.37□□□□□ -0.91
PRKCA-202ENST00000413366 VGFO15240 615 aaPredicted RBP9.37□□□□□ -0.91
PRKCA-202ENST00000413366 SETD5Q9C0A6 1442 aa9.37□□□□□ -0.91
PRKCA-202ENST00000413366 PIP4K2BP78356 416 aa9.36□□□□□ -0.91
PRKCA-202ENST00000413366 TRAK1Q9UPV9 953 aa9.36□□□□□ -0.91
PRKCA-202ENST00000413366 TPM4P67936 248 aa9.36□□□□□ -0.91
PRKCA-202ENST00000413366 CSPP1Q1MSJ5 1256 aa9.36□□□□□ -0.91
PRKCA-202ENST00000413366 NGEFQ8N5V2 710 aa9.36□□□□□ -0.91
PRKCA-202ENST00000413366 TSPYL1Q9H0U9 437 aa9.36□□□□□ -0.91
PRKCA-202ENST00000413366 TEFQ10587 303 aa9.35□□□□□ -0.91
PRKCA-202ENST00000413366 RAPGEF2Q9Y4G8 1499 aa9.35□□□□□ -0.91
PRKCA-202ENST00000413366 CEP89Q96ST8 783 aa9.35□□□□□ -0.91
PRKCA-202ENST00000413366 NUTM2BA6NNL0 878 aaPredicted RBP9.34□□□□□ -0.91
PRKCA-202ENST00000413366 NUTM2EB1AL46 878 aaPredicted RBP9.34□□□□□ -0.91
PRKCA-202ENST00000413366 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
PRKCA-202ENST00000413366 NEXNQ0ZGT2 675 aa9.34□□□□□ -0.91
PRKCA-202ENST00000413366 CCAR1Q8IX12 1150 aaKnown RBP9.34□□□□□ -0.91
PRKCA-202ENST00000413366 EVC2Q86UK5 1308 aa9.34□□□□□ -0.91
PRKCA-202ENST00000413366 TOP2AP11388 1531 aaKnown RBP9.34□□□□□ -0.91
PRKCA-202ENST00000413366 ZMYND15Q9H091 742 aa9.34□□□□□ -0.91
PRKCA-202ENST00000413366 ZNF771Q7L3S4 317 aaPredicted RBP9.33□□□□□ -0.92
PRKCA-202ENST00000413366 MPHOSPH9Q99550 1183 aa9.33□□□□□ -0.92
PRKCA-202ENST00000413366 AKAP17AQ02040 695 aaKnown RBP9.33□□□□□ -0.92
PRKCA-202ENST00000413366 HOMEZQ8IX15 550 aa9.33□□□□□ -0.92
PRKCA-202ENST00000413366 LRRFIP1Q32MZ4 808 aaKnown RBP9.33□□□□□ -0.92
PRKCA-202ENST00000413366 SMC4Q9NTJ3 1288 aa9.33□□□□□ -0.92
PRKCA-202ENST00000413366 WIZO95785 1651 aa9.32□□□□□ -0.92
PRKCA-202ENST00000413366 GPS2Q13227 327 aa9.32□□□□□ -0.92
PRKCA-202ENST00000413366 CREBRFQ8IUR6 639 aa9.32□□□□□ -0.92
PRKCA-202ENST00000413366 CCDC144AA2RUR9 1427 aa9.32□□□□□ -0.92
PRKCA-202ENST00000413366 RALBP1Q15311 655 aa9.31□□□□□ -0.92
PRKCA-202ENST00000413366 NOM1Q5C9Z4 860 aaKnown RBP9.31□□□□□ -0.92
PRKCA-202ENST00000413366 PHF14O94880 888 aa9.31□□□□□ -0.92
PRKCA-202ENST00000413366 SYNE3Q6ZMZ3 975 aa9.31□□□□□ -0.92
PRKCA-202ENST00000413366 RWDD1Q9H446 243 aaPredicted RBP9.31□□□□□ -0.92
PRKCA-202ENST00000413366 FHOD3Q2V2M9 1422 aa9.31□□□□□ -0.92
PRKCA-202ENST00000413366 DHX16O60231 1041 aaKnown RBP9.3□□□□□ -0.92
PRKCA-202ENST00000413366 RAPGEF4Q8WZA2 1011 aa9.3□□□□□ -0.92
PRKCA-202ENST00000413366 MINK1Q8N4C8 1332 aaPredicted RBP9.3□□□□□ -0.92
PRKCA-202ENST00000413366 SAMD1Q6SPF0 538 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 199.3 ms