RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 ZNF771Q7L3S4 317 aaPredicted RBP9.06□□□□□ -0.96
PTPN3-203ENST00000412145 INCENPQ9NQS7 918 aa9.06□□□□□ -0.96
PTPN3-203ENST00000412145 DIAPH3Q9NSV4 1193 aa9.06□□□□□ -0.96
PTPN3-203ENST00000412145 RUFY2Q8WXA3 655 aa9.05□□□□□ -0.96
PTPN3-203ENST00000412145 NAT10Q9H0A0 1025 aaKnown RBP9.05□□□□□ -0.96
PTPN3-203ENST00000412145 RCAN3Q9UKA8 241 aa9.05□□□□□ -0.96
PTPN3-203ENST00000412145 KIF7Q2M1P5 1343 aa9.05□□□□□ -0.96
PTPN3-203ENST00000412145 REC8O95072 547 aa9.05□□□□□ -0.96
PTPN3-203ENST00000412145 SMC4Q9NTJ3 1288 aa9.05□□□□□ -0.96
PTPN3-203ENST00000412145 ARHGAP35Q9NRY4 1499 aa9.05□□□□□ -0.96
PTPN3-203ENST00000412145 TAF3Q5VWG9 929 aa9.05□□□□□ -0.96
PTPN3-203ENST00000412145 USP8P40818 1118 aa9.05□□□□□ -0.96
PTPN3-203ENST00000412145 ANKRD18AQ8IVF6 992 aa9.04□□□□□ -0.96
PTPN3-203ENST00000412145 H3BQV1 296 aa9.04□□□□□ -0.96
PTPN3-203ENST00000412145 MARCH6O60337 910 aa9.04□□□□□ -0.96
PTPN3-203ENST00000412145 IFFO2Q5TF58 517 aa9.04□□□□□ -0.96
PTPN3-203ENST00000412145 SYNE3Q6ZMZ3 975 aa9.04□□□□□ -0.96
PTPN3-203ENST00000412145 TCEAL9Q9UHQ7 104 aa9.04□□□□□ -0.96
PTPN3-203ENST00000412145 UACAQ9BZF9 1416 aa9.04□□□□□ -0.96
PTPN3-203ENST00000412145 HIRIP3Q9BW71 556 aaPredicted RBP9.04□□□□□ -0.96
PTPN3-203ENST00000412145 GGT6Q6P531 493 aa9.04□□□□□ -0.96
PTPN3-203ENST00000412145 NEUROD2Q15784 382 aa9.03□□□□□ -0.96
PTPN3-203ENST00000412145 PIP4K2AP48426 406 aaPredicted RBP9.03□□□□□ -0.96
PTPN3-203ENST00000412145 ITPRIPQ8IWB1 547 aa9.03□□□□□ -0.96
PTPN3-203ENST00000412145 RBM19Q9Y4C8 960 aaKnown RBP9.03□□□□□ -0.96
PTPN3-203ENST00000412145 TERF2IPQ9NYB0 399 aa9.03□□□□□ -0.96
PTPN3-203ENST00000412145 LETM1O95202 739 aaPredicted RBP9.03□□□□□ -0.96
PTPN3-203ENST00000412145 KRI1Q8N9T8 703 aaKnown RBP9.03□□□□□ -0.96
PTPN3-203ENST00000412145 AEBP2Q6ZN18 517 aaPredicted RBP9.02□□□□□ -0.96
PTPN3-203ENST00000412145 WRNQ14191 1432 aaPredicted RBP eCLIP9.02□□□□□ -0.97
PTPN3-203ENST00000412145 HMGN5P82970 282 aaKnown RBP9.02□□□□□ -0.97
PTPN3-203ENST00000412145 TRIM29Q14134 588 aa9.02□□□□□ -0.97
PTPN3-203ENST00000412145 CENPQQ7L2Z9 268 aaPredicted RBP9.02□□□□□ -0.97
PTPN3-203ENST00000412145 TAF7LQ5H9L4 462 aa9.02□□□□□ -0.97
PTPN3-203ENST00000412145 RNF20Q5VTR2 975 aa9.01□□□□□ -0.97
PTPN3-203ENST00000412145 FAM184AQ8NB25 1140 aa9.01□□□□□ -0.97
PTPN3-203ENST00000412145 SETD5Q9C0A6 1442 aa9.01□□□□□ -0.97
PTPN3-203ENST00000412145 ZKSCAN1P17029 563 aaPredicted RBP9.01□□□□□ -0.97
PTPN3-203ENST00000412145 RABEP1Q15276 862 aa9.01□□□□□ -0.97
PTPN3-203ENST00000412145 AMER1Q5JTC6 1135 aaPredicted RBP9.01□□□□□ -0.97
PTPN3-203ENST00000412145 NCBP3Q53F19 620 aaKnown RBP9□□□□□ -0.97
PTPN3-203ENST00000412145 NOL10Q9BSC4 688 aaKnown RBP9□□□□□ -0.97
PTPN3-203ENST00000412145 CGNL1Q0VF96 1302 aa9□□□□□ -0.97
PTPN3-203ENST00000412145 LUC7LQ9NQ29 371 aaKnown RBP9□□□□□ -0.97
PTPN3-203ENST00000412145 WASHC2AQ641Q2 1341 aa9□□□□□ -0.97
PTPN3-203ENST00000412145 PDIA4P13667 645 aaKnown RBP9□□□□□ -0.97
PTPN3-203ENST00000412145 SRPK2P78362 688 aaKnown RBP9□□□□□ -0.97
PTPN3-203ENST00000412145 TRIM6-TRIM34B2RNG4 842 aa8.99□□□□□ -0.97
PTPN3-203ENST00000412145 CENPJQ9HC77 1338 aaPredicted RBP8.99□□□□□ -0.97
PTPN3-203ENST00000412145 NUCB2P80303 420 aa8.99□□□□□ -0.97
PTPN3-203ENST00000412145 GSE1Q14687 1217 aa8.99□□□□□ -0.97
PTPN3-203ENST00000412145 ERLIN2O94905 339 aa8.99□□□□□ -0.97
PTPN3-203ENST00000412145 B4GALNT3Q6L9W6 998 aa8.99□□□□□ -0.97
PTPN3-203ENST00000412145 MNS1Q8NEH6 495 aa8.98□□□□□ -0.97
PTPN3-203ENST00000412145 EIF4G1Q04637 1599 aaKnown RBP8.98□□□□□ -0.97
PTPN3-203ENST00000412145 ODF2Q5BJF6 829 aa8.98□□□□□ -0.97
PTPN3-203ENST00000412145 RSPH4AQ5TD94 716 aa8.98□□□□□ -0.97
PTPN3-203ENST00000412145 IQCEQ6IPM2 695 aa8.98□□□□□ -0.97
PTPN3-203ENST00000412145 TSPYL1Q9H0U9 437 aa8.98□□□□□ -0.97
PTPN3-203ENST00000412145 CYB5RLQ6IPT4 315 aa8.98□□□□□ -0.97
PTPN3-203ENST00000412145 CCDC39Q9UFE4 941 aa8.98□□□□□ -0.97
PTPN3-203ENST00000412145 H0YHG0 523 aa8.98□□□□□ -0.97
PTPN3-203ENST00000412145 G3V3G9 751 aa8.98□□□□□ -0.97
PTPN3-203ENST00000412145 DCAF8Q5TAQ9 597 aa8.98□□□□□ -0.97
PTPN3-203ENST00000412145 SOX12O15370 315 aa8.98□□□□□ -0.97
PTPN3-203ENST00000412145 STK11IPQ8N1F8 1099 aa8.98□□□□□ -0.97
PTPN3-203ENST00000412145 FMN1Q68DA7 1419 aa8.97□□□□□ -0.97
PTPN3-203ENST00000412145 FAM161AQ3B820 660 aa8.97□□□□□ -0.97
PTPN3-203ENST00000412145 CC2D1BQ5T0F9 858 aaKnown RBP8.97□□□□□ -0.97
PTPN3-203ENST00000412145 NLRP13Q86W25 1043 aa8.97□□□□□ -0.97
PTPN3-203ENST00000412145 CECR2Q9BXF3 1484 aa8.97□□□□□ -0.97
PTPN3-203ENST00000412145 APPP05067 770 aa8.97□□□□□ -0.97
PTPN3-203ENST00000412145 BAZ1AQ9NRL2 1556 aaPredicted RBP8.97□□□□□ -0.97
PTPN3-203ENST00000412145 PES1O00541 588 aaKnown RBP8.97□□□□□ -0.97
PTPN3-203ENST00000412145 EZRP15311 586 aaKnown RBP8.97□□□□□ -0.97
PTPN3-203ENST00000412145 KIF15Q9NS87 1388 aa8.97□□□□□ -0.97
PTPN3-203ENST00000412145 PDS5BQ9NTI5 1447 aa8.97□□□□□ -0.97
PTPN3-203ENST00000412145 DDX49Q9Y6V7 483 aaKnown RBP8.97□□□□□ -0.97
PTPN3-203ENST00000412145 HOMER1Q86YM7 354 aa8.97□□□□□ -0.97
PTPN3-203ENST00000412145 CARMIL2Q6F5E8 1435 aa8.97□□□□□ -0.97
PTPN3-203ENST00000412145 CT47A1Q5JQC4 288 aaPredicted RBP8.96□□□□□ -0.97
PTPN3-203ENST00000412145 CCAR2Q8N163 923 aaKnown RBP8.96□□□□□ -0.97
PTPN3-203ENST00000412145 SLKQ9H2G2 1235 aaPredicted RBP8.96□□□□□ -0.97
PTPN3-203ENST00000412145 TAOK2Q9UL54 1235 aa8.96□□□□□ -0.97
PTPN3-203ENST00000412145 LEKR1Q6ZMV7 388 aa8.96□□□□□ -0.97
PTPN3-203ENST00000412145 BRMS1Q9HCU9 246 aa8.96□□□□□ -0.97
PTPN3-203ENST00000412145 FEZ1Q99689 392 aa8.96□□□□□ -0.97
PTPN3-203ENST00000412145 SAFBQ15424 915 aaKnown RBP eCLIP8.96□□□□□ -0.98
PTPN3-203ENST00000412145 MFAP1P55081 439 aaKnown RBP8.96□□□□□ -0.98
PTPN3-203ENST00000412145 HSP90AB4PQ58FF6 505 aa8.96□□□□□ -0.98
PTPN3-203ENST00000412145 GZF1Q9H116 711 aaPredicted RBP8.96□□□□□ -0.98
PTPN3-203ENST00000412145 GOLGA6L10A6NI86 522 aa8.95□□□□□ -0.98
PTPN3-203ENST00000412145 XBP1P17861 261 aa8.95□□□□□ -0.98
PTPN3-203ENST00000412145 SMARCE1Q969G3 411 aa8.95□□□□□ -0.98
PTPN3-203ENST00000412145 CCDC43Q96MW1 224 aaKnown RBP8.95□□□□□ -0.98
PTPN3-203ENST00000412145 ANKRD30AQ9BXX3 1397 aa8.95□□□□□ -0.98
PTPN3-203ENST00000412145 CARMIL1Q5VZK9 1371 aa8.95□□□□□ -0.98
PTPN3-203ENST00000412145 VPS53Q5VIR6 699 aa8.95□□□□□ -0.98
PTPN3-203ENST00000412145 FAM43AQ8N2R8 423 aa8.94□□□□□ -0.98
PTPN3-203ENST00000412145 TRIM34Q9BYJ4 488 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms