RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-204ENST00000410054 CWC15Q9P013 229 aaKnown RBP6.55□□□□□ -1.36
R3HDM1-204ENST00000410054 DZIP1Q86YF9 867 aaKnown RBP6.55□□□□□ -1.36
R3HDM1-204ENST00000410054 TSPY4P0CV99 314 aa6.55□□□□□ -1.36
R3HDM1-204ENST00000410054 TSPY10P0CW01 314 aa6.55□□□□□ -1.36
R3HDM1-204ENST00000410054 AK7Q96M32 723 aa6.55□□□□□ -1.36
R3HDM1-204ENST00000410054 RBM27Q9P2N5 1060 aaKnown RBP6.54□□□□□ -1.36
R3HDM1-204ENST00000410054 FRMD4BQ9Y2L6 1034 aa6.54□□□□□ -1.36
R3HDM1-204ENST00000410054 KRI1Q8N9T8 703 aaKnown RBP6.54□□□□□ -1.36
R3HDM1-204ENST00000410054 DNAI2Q9GZS0 605 aa6.54□□□□□ -1.36
R3HDM1-204ENST00000410054 WDHD1O75717 1129 aaPredicted RBP6.53□□□□□ -1.36
R3HDM1-204ENST00000410054 IBSPP21815 317 aaPredicted RBP6.53□□□□□ -1.36
R3HDM1-204ENST00000410054 RDXP35241 583 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-204ENST00000410054 VGLL3A8MV65 326 aa6.53□□□□□ -1.36
R3HDM1-204ENST00000410054 SMARCA5O60264 1052 aaPredicted RBP6.53□□□□□ -1.36
R3HDM1-204ENST00000410054 TRIM6-TRIM34B2RNG4 842 aa6.53□□□□□ -1.36
R3HDM1-204ENST00000410054 PEX14O75381 377 aa6.53□□□□□ -1.36
R3HDM1-204ENST00000410054 TRIM34Q9BYJ4 488 aa6.53□□□□□ -1.36
R3HDM1-204ENST00000410054 PDCL3Q9H2J4 239 aa6.53□□□□□ -1.36
R3HDM1-204ENST00000410054 FAM43AQ8N2R8 423 aa6.53□□□□□ -1.36
R3HDM1-204ENST00000410054 CEP89Q96ST8 783 aa6.53□□□□□ -1.36
R3HDM1-204ENST00000410054 CIZ1Q9ULV3 898 aaPredicted RBP6.53□□□□□ -1.36
R3HDM1-204ENST00000410054 EXOC8Q8IYI6 725 aa6.52□□□□□ -1.37
R3HDM1-204ENST00000410054 LIG1P18858 919 aa6.52□□□□□ -1.37
R3HDM1-204ENST00000410054 NAP1L4Q99733 375 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-204ENST00000410054 CALD1Q05682 793 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-204ENST00000410054 RPAINQ86UA6 219 aa6.52□□□□□ -1.37
R3HDM1-204ENST00000410054 ZCRB1Q8TBF4 217 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-204ENST00000410054 ZRANB2O95218 330 aaKnown RBP eCLIP6.51□□□□□ -1.37
R3HDM1-204ENST00000410054 TRIM29Q14134 588 aa6.51□□□□□ -1.37
R3HDM1-204ENST00000410054 DYDC1Q8WWB3 177 aa6.51□□□□□ -1.37
R3HDM1-204ENST00000410054 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.51□□□□□ -1.377e-7■■■■■ 81.3
R3HDM1-204ENST00000410054 ZHX1Q9UKY1 873 aaPredicted RBP6.51□□□□□ -1.37
R3HDM1-204ENST00000410054 GOLGA6L19H0YKK7 550 aa6.51□□□□□ -1.37
R3HDM1-204ENST00000410054 CCDC175P0C221 793 aa6.51□□□□□ -1.37
R3HDM1-204ENST00000410054 MNS1Q8NEH6 495 aa6.51□□□□□ -1.37
R3HDM1-204ENST00000410054 GTF2A1P52655 376 aaPredicted RBP6.51□□□□□ -1.37
R3HDM1-204ENST00000410054 KIF4AO95239 1232 aa6.5□□□□□ -1.37
R3HDM1-204ENST00000410054 HSP90AB2PQ58FF8 381 aa6.5□□□□□ -1.37
R3HDM1-204ENST00000410054 ZNHIT6Q9NWK9 470 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-204ENST00000410054 CC2D2BQ6DHV5 1058 aa6.5□□□□□ -1.37
R3HDM1-204ENST00000410054 PPP4R4Q6NUP7 873 aa6.49□□□□□ -1.37
R3HDM1-204ENST00000410054 TTC36A6NLP5 189 aa6.49□□□□□ -1.37
R3HDM1-204ENST00000410054 FYB1O15117 783 aa6.49□□□□□ -1.37
R3HDM1-204ENST00000410054 TPM3P06753 285 aa6.49□□□□□ -1.37
R3HDM1-204ENST00000410054 TMED8Q6PL24 325 aaPredicted RBP6.49□□□□□ -1.37
R3HDM1-204ENST00000410054 BTN2A1Q7KYR7 527 aa6.49□□□□□ -1.37
R3HDM1-204ENST00000410054 P3H3Q8IVL6 736 aa6.49□□□□□ -1.37
R3HDM1-204ENST00000410054 CCER2I3L3R5 266 aa6.48□□□□□ -1.37
R3HDM1-204ENST00000410054 ADRA2BP18089 450 aa6.48□□□□□ -1.37
R3HDM1-204ENST00000410054 USP8P40818 1118 aa6.48□□□□□ -1.37
R3HDM1-204ENST00000410054 ZNF513Q8N8E2 541 aaPredicted RBP6.48□□□□□ -1.37
R3HDM1-204ENST00000410054 CSB-PGBD3P0DP91 1061 aa6.48□□□□□ -1.37
R3HDM1-204ENST00000410054 SPTY2D1Q68D10 685 aaPredicted RBP6.48□□□□□ -1.37
R3HDM1-204ENST00000410054 FOXD4L1Q9NU39 408 aa6.48□□□□□ -1.37
R3HDM1-204ENST00000410054 LCA5Q86VQ0 697 aa6.48□□□□□ -1.37
R3HDM1-204ENST00000410054 UIMC1Q96RL1 719 aa6.48□□□□□ -1.37
R3HDM1-204ENST00000410054 DHX16O60231 1041 aaKnown RBP6.47□□□□□ -1.37
R3HDM1-204ENST00000410054 STK10O94804 968 aaKnown RBP6.47□□□□□ -1.37
R3HDM1-204ENST00000410054 CEP120Q8N960 986 aa6.47□□□□□ -1.37
R3HDM1-204ENST00000410054 CPSF2Q9P2I0 782 aaKnown RBP6.47□□□□□ -1.37
R3HDM1-204ENST00000410054 BECN1Q14457 450 aa6.47□□□□□ -1.37
R3HDM1-204ENST00000410054 PRDM16Q9HAZ2 1276 aa6.47□□□□□ -1.37
R3HDM1-204ENST00000410054 SUPT16HQ9Y5B9 1047 aaKnown RBP6.47□□□□□ -1.37
R3HDM1-204ENST00000410054 ENOX2Q16206 610 aaKnown RBP6.46□□□□□ -1.37
R3HDM1-204ENST00000410054 RASSF8Q8NHQ8 419 aa6.46□□□□□ -1.37
R3HDM1-204ENST00000410054 TPD52L2O43399 206 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-204ENST00000410054 SAFB2Q14151 953 aaKnown RBP eCLIP6.46□□□□□ -1.38
R3HDM1-204ENST00000410054 SEPT14Q6ZU15 432 aa6.46□□□□□ -1.38
R3HDM1-204ENST00000410054 NBPF6Q5VWK0 638 aa6.46□□□□□ -1.38
R3HDM1-204ENST00000410054 FAM43BQ6ZT52 329 aaPredicted RBP6.46□□□□□ -1.38
R3HDM1-204ENST00000410054 NBPF5PQ86XG9 351 aaPredicted RBP6.46□□□□□ -1.38
R3HDM1-204ENST00000410054 NBPF4Q96M43 638 aa6.46□□□□□ -1.38
R3HDM1-204ENST00000410054 GSE1Q14687 1217 aa6.45□□□□□ -1.38
R3HDM1-204ENST00000410054 CTR9Q6PD62 1173 aa6.45□□□□□ -1.38
R3HDM1-204ENST00000410054 MARCH6O60337 910 aa6.45□□□□□ -1.38
R3HDM1-204ENST00000410054 MORC4Q8TE76 937 aa6.45□□□□□ -1.38
R3HDM1-204ENST00000410054 METTL14Q9HCE5 456 aaKnown RBP6.45□□□□□ -1.38
R3HDM1-204ENST00000410054 CSPP1Q1MSJ5 1256 aa6.45□□□□□ -1.38
R3HDM1-204ENST00000410054 GIMAP7Q8NHV1 300 aa6.45□□□□□ -1.38
R3HDM1-204ENST00000410054 SLMAPQ14BN4 828 aa6.45□□□□□ -1.38
R3HDM1-204ENST00000410054 PRPF38AQ8NAV1 312 aaKnown RBP6.45□□□□□ -1.38
R3HDM1-204ENST00000410054 TRIM63Q969Q1 353 aa6.45□□□□□ -1.38
R3HDM1-204ENST00000410054 HMMRO75330 724 aa6.44□□□□□ -1.38
R3HDM1-204ENST00000410054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.44□□□□□ -1.38
R3HDM1-204ENST00000410054 CXorf38Q8TB03 319 aa6.44□□□□□ -1.38
R3HDM1-204ENST00000410054 ITGAEP38570 1179 aa6.44□□□□□ -1.38
R3HDM1-204ENST00000410054 TEX35Q5T0J7 233 aa6.44□□□□□ -1.38
R3HDM1-204ENST00000410054 TAX1BP1Q86VP1 789 aa6.44□□□□□ -1.38
R3HDM1-204ENST00000410054 KIF3AQ9Y496 699 aa6.44□□□□□ -1.38
R3HDM1-204ENST00000410054 LRCH2Q5VUJ6 765 aa6.44□□□□□ -1.38
R3HDM1-204ENST00000410054 GOLGA6L10A6NI86 522 aa6.43□□□□□ -1.38
R3HDM1-204ENST00000410054 BRD3Q15059 726 aa6.43□□□□□ -1.38
R3HDM1-204ENST00000410054 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.43□□□□□ -1.38
R3HDM1-204ENST00000410054 CCAR1Q8IX12 1150 aaKnown RBP6.43□□□□□ -1.38
R3HDM1-204ENST00000410054 CALCOCO1Q9P1Z2 691 aa6.43□□□□□ -1.38
R3HDM1-204ENST00000410054 SWAP70Q9UH65 585 aa6.43□□□□□ -1.38
R3HDM1-204ENST00000410054 MAFGO15525 162 aa6.43□□□□□ -1.38
R3HDM1-204ENST00000410054 KCNJ4P48050 445 aa6.43□□□□□ -1.38
R3HDM1-204ENST00000410054 KNSTRNQ9Y448 316 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms