RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 ZDHHC16Q969W1 377 aa13.94□□□□□ -0.18
PTPN12-202ENST00000407343 MAP2K5Q13163 448 aa13.93□□□□□ -0.18
PTPN12-202ENST00000407343 MINK1Q8N4C8 1332 aaPredicted RBP13.91□□□□□ -0.18
PTPN12-202ENST00000407343 KRI1Q8N9T8 703 aaKnown RBP13.91□□□□□ -0.18
PTPN12-202ENST00000407343 IRF6O14896 467 aa13.9□□□□□ -0.18
PTPN12-202ENST00000407343 TRIM66O15016 1216 aa13.9□□□□□ -0.18
PTPN12-202ENST00000407343 C6orf132Q5T0Z8 1188 aa13.9□□□□□ -0.18
PTPN12-202ENST00000407343 CCDC102AQ96A19 550 aa13.89□□□□□ -0.19
PTPN12-202ENST00000407343 BCL2L12Q9HB09 334 aa13.84□□□□□ -0.19
PTPN12-202ENST00000407343 PSDA5PKW4 1024 aaPredicted RBP13.83□□□□□ -0.2
PTPN12-202ENST00000407343 NEUROD2Q15784 382 aa13.83□□□□□ -0.2
PTPN12-202ENST00000407343 PPP4R3BQ5MIZ7 849 aa13.83□□□□□ -0.2
PTPN12-202ENST00000407343 TTC13Q8NBP0 860 aa13.83□□□□□ -0.2
PTPN12-202ENST00000407343 ST18O60284 1047 aa13.82□□□□□ -0.2
PTPN12-202ENST00000407343 PDE4DQ08499 809 aa13.82□□□□□ -0.2
PTPN12-202ENST00000407343 COL9A1P20849 921 aa13.81□□□□□ -0.2
PTPN12-202ENST00000407343 AMHR2Q16671 573 aa13.8□□□□□ -0.2
PTPN12-202ENST00000407343 GPBP1L1Q9HC44 474 aaPredicted RBP13.8□□□□□ -0.2
PTPN12-202ENST00000407343 CERKQ8TCT0 537 aa13.79□□□□□ -0.2
PTPN12-202ENST00000407343 PADI6Q6TGC4 694 aa13.78□□□□□ -0.2
PTPN12-202ENST00000407343 RBM27Q9P2N5 1060 aaKnown RBP13.78□□□□□ -0.2
PTPN12-202ENST00000407343 FAM198AQ9UFP1 575 aa13.77□□□□□ -0.21
PTPN12-202ENST00000407343 LCE2DQ5TA82 110 aaPredicted RBP13.76□□□□□ -0.21
PTPN12-202ENST00000407343 PHOX2BQ99453 314 aa13.76□□□□□ -0.21
PTPN12-202ENST00000407343 PRSS12P56730 875 aa13.74□□□□□ -0.21
PTPN12-202ENST00000407343 FAM161AQ3B820 660 aa13.74□□□□□ -0.21
PTPN12-202ENST00000407343 POTEEQ6S8J3 1075 aa13.74□□□□□ -0.21
PTPN12-202ENST00000407343 PPP1R3GB7ZBB8 358 aa13.73□□□□□ -0.21
PTPN12-202ENST00000407343 TMEM132AQ24JP5 1023 aa13.73□□□□□ -0.21
PTPN12-202ENST00000407343 PARP9Q8IXQ6 854 aa13.73□□□□□ -0.21
PTPN12-202ENST00000407343 CDCA7LQ96GN5 454 aa13.73□□□□□ -0.21
PTPN12-202ENST00000407343 ADGRG1Q9Y653 693 aa13.73□□□□□ -0.21
PTPN12-202ENST00000407343 PTPREP23469 700 aa13.72□□□□□ -0.21
PTPN12-202ENST00000407343 KDM4CQ9H3R0 1056 aa13.72□□□□□ -0.21
PTPN12-202ENST00000407343 MARVELD3Q96A59 401 aa13.71□□□□□ -0.21
PTPN12-202ENST00000407343 TMUB1Q9BVT8 246 aa13.71□□□□□ -0.21
PTPN12-202ENST00000407343 REPIN1Q9BWE0 567 aaKnown RBP13.71□□□□□ -0.21
PTPN12-202ENST00000407343 C3orf80F5H4A9 247 aa13.7□□□□□ -0.22
PTPN12-202ENST00000407343 TSKSQ9UJT2 592 aa13.7□□□□□ -0.22
PTPN12-202ENST00000407343 VARS2Q5ST30 1063 aaKnown RBP13.69□□□□□ -0.22
PTPN12-202ENST00000407343 METTL3Q86U44 580 aaKnown RBP13.69□□□□□ -0.22
PTPN12-202ENST00000407343 POTEB3A0JP26 581 aa13.68□□□□□ -0.22
PTPN12-202ENST00000407343 POTEBQ6S5H4 581 aa13.68□□□□□ -0.22
PTPN12-202ENST00000407343 PXYLP1Q8TE99 480 aa13.68□□□□□ -0.22
PTPN12-202ENST00000407343 ERBB3P21860 1342 aa13.67□□□□□ -0.22
PTPN12-202ENST00000407343 EMP3P54852 163 aa13.66□□□□□ -0.22
PTPN12-202ENST00000407343 KCNK17Q96T54 332 aa13.66□□□□□ -0.22
PTPN12-202ENST00000407343 PSEN2P49810 448 aa13.65□□□□□ -0.22
PTPN12-202ENST00000407343 TRIM6-TRIM34B2RNG4 842 aa13.63□□□□□ -0.23
PTPN12-202ENST00000407343 PROX2Q3B8N5 592 aa13.63□□□□□ -0.23
PTPN12-202ENST00000407343 NLRP7Q8WX94 980 aa13.63□□□□□ -0.23
PTPN12-202ENST00000407343 FAM163AQ96GL9 167 aaPredicted RBP13.63□□□□□ -0.23
PTPN12-202ENST00000407343 ZBED2Q9BTP6 218 aa13.63□□□□□ -0.23
PTPN12-202ENST00000407343 OATP04181 439 aa13.62□□□□□ -0.23
PTPN12-202ENST00000407343 EYA1Q99502 592 aa13.62□□□□□ -0.23
PTPN12-202ENST00000407343 GIGYF2Q6Y7W6 1299 aaKnown RBP13.61□□□□□ -0.23
PTPN12-202ENST00000407343 FAM117AQ9C073 453 aa13.61□□□□□ -0.23
PTPN12-202ENST00000407343 FAM205CA6NFA0 338 aa13.6□□□□□ -0.23
PTPN12-202ENST00000407343 DMRTA1Q5VZB9 504 aa13.6□□□□□ -0.23
PTPN12-202ENST00000407343 ZNF687Q8N1G0 1237 aa13.6□□□□□ -0.23
PTPN12-202ENST00000407343 PLEKHG3A1L390 1219 aa13.59□□□□□ -0.23
PTPN12-202ENST00000407343 ARHGAP33O14559 1287 aa13.59□□□□□ -0.23
PTPN12-202ENST00000407343 MS4A1P11836 297 aa13.59□□□□□ -0.23
PTPN12-202ENST00000407343 MDM2Q00987 491 aaPredicted RBP13.59□□□□□ -0.23
PTPN12-202ENST00000407343 AXIN2Q9Y2T1 843 aa13.59□□□□□ -0.23
PTPN12-202ENST00000407343 TTLL12Q14166 644 aaPredicted RBP13.58□□□□□ -0.24
PTPN12-202ENST00000407343 HS3ST6Q96QI5 342 aa13.58□□□□□ -0.24
PTPN12-202ENST00000407343 ONECUT3O60422 494 aaPredicted RBP13.57□□□□□ -0.24
PTPN12-202ENST00000407343 CLCN1P35523 988 aa13.56□□□□□ -0.24
PTPN12-202ENST00000407343 SLC4A5Q9BY07 1137 aa13.56□□□□□ -0.24
PTPN12-202ENST00000407343 GPCPD1Q9NPB8 672 aa13.56□□□□□ -0.24
PTPN12-202ENST00000407343 PBX2P40425 430 aa13.55□□□□□ -0.24
PTPN12-202ENST00000407343 NUDT18Q6ZVK8 323 aa13.55□□□□□ -0.24
PTPN12-202ENST00000407343 IL27Q8NEV9 243 aa13.55□□□□□ -0.24
PTPN12-202ENST00000407343 RBM46Q8TBY0 533 aaKnown RBP13.55□□□□□ -0.24
PTPN12-202ENST00000407343 TATDN2Q93075 761 aa13.55□□□□□ -0.24
PTPN12-202ENST00000407343 RCCD1A6NED2 376 aa13.52□□□□□ -0.25
PTPN12-202ENST00000407343 NBPF26B4DH59 902 aa13.52□□□□□ -0.25
PTPN12-202ENST00000407343 FAM217BQ9NTX9 383 aaPredicted RBP13.52□□□□□ -0.25
PTPN12-202ENST00000407343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.51□□□□□ -0.25
PTPN12-202ENST00000407343 SMAPO00193 183 aa13.51□□□□□ -0.25
PTPN12-202ENST00000407343 KIAA1468Q9P260 1216 aa13.51□□□□□ -0.25
PTPN12-202ENST00000407343 PNMA3Q9UL41 463 aa13.51□□□□□ -0.25
PTPN12-202ENST00000407343 PACS2Q86VP3 889 aa13.5□□□□□ -0.25
PTPN12-202ENST00000407343 KCNH8Q96L42 1107 aa13.49□□□□□ -0.25
PTPN12-202ENST00000407343 VPS9D1Q9Y2B5 631 aa13.49□□□□□ -0.25
PTPN12-202ENST00000407343 SSTR3P32745 418 aaPredicted RBP13.48□□□□□ -0.25
PTPN12-202ENST00000407343 DDRGK1Q96HY6 314 aa13.48□□□□□ -0.25
PTPN12-202ENST00000407343 RABGEF1Q9UJ41 708 aa13.48□□□□□ -0.25
PTPN12-202ENST00000407343 DNAJB2P25686 324 aa13.46□□□□□ -0.25
PTPN12-202ENST00000407343 TMEM134Q9H6X4 195 aa13.46□□□□□ -0.25
PTPN12-202ENST00000407343 DAXXQ9UER7 740 aaPredicted RBP13.45□□□□□ -0.26
PTPN12-202ENST00000407343 GTF3C3Q9Y5Q9 886 aa13.45□□□□□ -0.26
PTPN12-202ENST00000407343 BHMG1C9JSJ3 638 aaPredicted RBP13.44□□□□□ -0.26
PTPN12-202ENST00000407343 SEPT9Q9UHD8 586 aaPredicted RBP13.42□□□□□ -0.26
PTPN12-202ENST00000407343 TK2O00142 265 aa13.41□□□□□ -0.26
PTPN12-202ENST00000407343 LSM11P83369 360 aaKnown RBP eCLIP13.4□□□□□ -0.26
PTPN12-202ENST00000407343 BEGAINQ9BUH8 593 aa13.4□□□□□ -0.26
PTPN12-202ENST00000407343 CD46P15529 392 aa13.38□□□□□ -0.27
PTPN12-202ENST00000407343 GOPCQ9HD26 462 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms