RNA–Protein interactions for RNA: ENST00000405995.5

PRRC2B-203, Transcript of proline rich coiled-coil 2B, humanhuman

TSL 5 BASIC

Gene PRRC2B, Length 9,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2B-203ENST00000405995 CAVIN1Q6NZI2 390 aaKnown RBP12.6□□□□□ -0.39
PRRC2B-203ENST00000405995 SLKQ9H2G2 1235 aaPredicted RBP12.6□□□□□ -0.39
PRRC2B-203ENST00000405995 NAP1L2Q9ULW6 460 aaPredicted RBP12.59□□□□□ -0.39
PRRC2B-203ENST00000405995 GPATCH11Q8N954 259 aa12.59□□□□□ -0.39
PRRC2B-203ENST00000405995 SWAP70Q9UH65 585 aa12.59□□□□□ -0.39
PRRC2B-203ENST00000405995 MRVI1Q9Y6F6 885 aa12.59□□□□□ -0.39
PRRC2B-203ENST00000405995 PLEKHD1A6NEE1 506 aa12.59□□□□□ -0.39
PRRC2B-203ENST00000405995 GTF2A1P52655 376 aaPredicted RBP12.59□□□□□ -0.39
PRRC2B-203ENST00000405995 CCAR2Q8N163 923 aaKnown RBP12.58□□□□□ -0.39
PRRC2B-203ENST00000405995 MAPK8IP2Q13387 824 aaPredicted RBP12.58□□□□□ -0.4
PRRC2B-203ENST00000405995 GPATCH3Q96I76 525 aa12.58□□□□□ -0.4
PRRC2B-203ENST00000405995 CPSF2Q9P2I0 782 aaKnown RBP12.58□□□□□ -0.4
PRRC2B-203ENST00000405995 TPM1P09493 284 aa12.58□□□□□ -0.4
PRRC2B-203ENST00000405995 CEP89Q96ST8 783 aa12.57□□□□□ -0.4
PRRC2B-203ENST00000405995 GOLGA6L10A0A0M3HER8 536 aa12.57□□□□□ -0.4
PRRC2B-203ENST00000405995 TDO2P48775 406 aa12.57□□□□□ -0.4
PRRC2B-203ENST00000405995 TSR1Q2NL82 804 aaKnown RBP12.57□□□□□ -0.4
PRRC2B-203ENST00000405995 LIG1P18858 919 aa12.57□□□□□ -0.4
PRRC2B-203ENST00000405995 MRE11P49959 708 aa12.57□□□□□ -0.4
PRRC2B-203ENST00000405995 IPO8O15397 1037 aaKnown RBP12.56□□□□□ -0.4
PRRC2B-203ENST00000405995 SUDS3Q9H7L9 328 aaPredicted RBP12.56□□□□□ -0.4
PRRC2B-203ENST00000405995 POGKQ9P215 609 aa12.56□□□□□ -0.4
PRRC2B-203ENST00000405995 MPHOSPH10O00566 681 aaKnown RBP12.55□□□□□ -0.4
PRRC2B-203ENST00000405995 BCCIPQ9P287 314 aaKnown RBP eCLIP12.55□□□□□ -0.4
PRRC2B-203ENST00000405995 SENP3Q9H4L4 574 aaPredicted RBP12.55□□□□□ -0.4
PRRC2B-203ENST00000405995 ISY1Q9ULR0 285 aaKnown RBP12.55□□□□□ -0.4
PRRC2B-203ENST00000405995 SPATA24Q86W54 205 aa12.55□□□□□ -0.4
PRRC2B-203ENST00000405995 LETM1O95202 739 aaPredicted RBP12.54□□□□□ -0.4
PRRC2B-203ENST00000405995 KIAA1328Q86T90 577 aa12.54□□□□□ -0.4
PRRC2B-203ENST00000405995 CCP110O43303 1012 aa12.54□□□□□ -0.4
PRRC2B-203ENST00000405995 CHIC2Q9UKJ5 165 aa12.54□□□□□ -0.4
PRRC2B-203ENST00000405995 ATP6V1DQ9Y5K8 247 aa12.54□□□□□ -0.4
PRRC2B-203ENST00000405995 ZNF592Q92610 1267 aa12.54□□□□□ -0.4
PRRC2B-203ENST00000405995 TIGD1Q96MW7 591 aa12.54□□□□□ -0.4
PRRC2B-203ENST00000405995 FYB1O15117 783 aa12.54□□□□□ -0.4
PRRC2B-203ENST00000405995 SPRYD3Q8NCJ5 442 aa12.54□□□□□ -0.4
PRRC2B-203ENST00000405995 CLIP1P30622 1438 aa12.54□□□□□ -0.4
PRRC2B-203ENST00000405995 R3HCC1Q9Y3T6 440 aaKnown RBP12.53□□□□□ -0.4
PRRC2B-203ENST00000405995 WDR66Q8TBY9 1149 aa12.53□□□□□ -0.4
PRRC2B-203ENST00000405995 KRI1Q8N9T8 703 aaKnown RBP12.53□□□□□ -0.4
PRRC2B-203ENST00000405995 EIF3JO75822 258 aaKnown RBP12.53□□□□□ -0.4
PRRC2B-203ENST00000405995 RBM10P98175 930 aaKnown RBP12.53□□□□□ -0.4
PRRC2B-203ENST00000405995 SARNPP82979 210 aaKnown RBP12.53□□□□□ -0.4
PRRC2B-203ENST00000405995 FAM193AP78312 1265 aa12.52□□□□□ -0.4
PRRC2B-203ENST00000405995 GOLGA3Q08378 1498 aa12.52□□□□□ -0.4
PRRC2B-203ENST00000405995 MYO6Q9UM54 1294 aa12.52□□□□□ -0.41
PRRC2B-203ENST00000405995 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.41
PRRC2B-203ENST00000405995 RALBP1Q15311 655 aa12.52□□□□□ -0.41
PRRC2B-203ENST00000405995 TTLL5Q6EMB2 1281 aa12.51□□□□□ -0.41
PRRC2B-203ENST00000405995 LMOD3Q0VAK6 560 aa12.51□□□□□ -0.41
PRRC2B-203ENST00000405995 DHX8Q14562 1220 aaKnown RBP12.51□□□□□ -0.41
PRRC2B-203ENST00000405995 RTF1Q92541 710 aaKnown RBP12.51□□□□□ -0.41
PRRC2B-203ENST00000405995 CCDC173Q0VFZ6 552 aa12.51□□□□□ -0.41
PRRC2B-203ENST00000405995 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.51□□□□□ -0.415e-7■■■■□ 22.2
PRRC2B-203ENST00000405995 ENOX2Q16206 610 aaKnown RBP12.51□□□□□ -0.41
PRRC2B-203ENST00000405995 CGNQ9P2M7 1197 aaKnown RBP12.5□□□□□ -0.41
PRRC2B-203ENST00000405995 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
PRRC2B-203ENST00000405995 CT47A1Q5JQC4 288 aaPredicted RBP12.5□□□□□ -0.41
PRRC2B-203ENST00000405995 NASPP49321 788 aaPredicted RBP12.5□□□□□ -0.41
PRRC2B-203ENST00000405995 STK31Q9BXU1 1019 aa12.5□□□□□ -0.41
PRRC2B-203ENST00000405995 CCER2I3L3R5 266 aa12.5□□□□□ -0.41
PRRC2B-203ENST00000405995 CCDC91Q7Z6B0 441 aa12.5□□□□□ -0.41
PRRC2B-203ENST00000405995 HOMER1Q86YM7 354 aa12.5□□□□□ -0.41
PRRC2B-203ENST00000405995 CLASRPQ8N2M8 674 aaKnown RBP12.49□□□□□ -0.41
PRRC2B-203ENST00000405995 PAF1Q8N7H5 531 aa12.49□□□□□ -0.41
PRRC2B-203ENST00000405995 SEPT6Q14141 434 aa12.49□□□□□ -0.41
PRRC2B-203ENST00000405995 CARD11Q9BXL7 1154 aa12.49□□□□□ -0.41
PRRC2B-203ENST00000405995 IPO7O95373 1038 aaKnown RBP12.48□□□□□ -0.41
PRRC2B-203ENST00000405995 RNF20Q5VTR2 975 aa12.48□□□□□ -0.41
PRRC2B-203ENST00000405995 SEPT14Q6ZU15 432 aa12.48□□□□□ -0.41
PRRC2B-203ENST00000405995 UQCRHLA0A096LP55 91 aa12.48□□□□□ -0.41
PRRC2B-203ENST00000405995 POLR3GO15318 223 aaPredicted RBP12.48□□□□□ -0.41
PRRC2B-203ENST00000405995 UQCRHP07919 91 aa12.48□□□□□ -0.41
PRRC2B-203ENST00000405995 FAM114A1Q8IWE2 563 aa12.48□□□□□ -0.41
PRRC2B-203ENST00000405995 LMOD2Q6P5Q4 547 aa12.47□□□□□ -0.41
PRRC2B-203ENST00000405995 DDX49Q9Y6V7 483 aaKnown RBP12.47□□□□□ -0.41
PRRC2B-203ENST00000405995 TMF1P82094 1093 aa12.47□□□□□ -0.41
PRRC2B-203ENST00000405995 FHAD1B1AJZ9 1412 aa12.47□□□□□ -0.41
PRRC2B-203ENST00000405995 IFT57Q9NWB7 429 aa12.46□□□□□ -0.41
PRRC2B-203ENST00000405995 E9PSI1 815 aa12.46□□□□□ -0.41
PRRC2B-203ENST00000405995 ST18O60284 1047 aa12.46□□□□□ -0.41
PRRC2B-203ENST00000405995 NF2P35240 595 aa12.46□□□□□ -0.42
PRRC2B-203ENST00000405995 LUZP1Q86V48 1076 aa12.46□□□□□ -0.42
PRRC2B-203ENST00000405995 RASSF8Q8NHQ8 419 aa12.46□□□□□ -0.42
PRRC2B-203ENST00000405995 MIPOL1Q8TD10 442 aa12.45□□□□□ -0.42
PRRC2B-203ENST00000405995 DZIP1Q86YF9 867 aaKnown RBP12.45□□□□□ -0.42
PRRC2B-203ENST00000405995 ZCCHC6Q5VYS8 1495 aaKnown RBP12.45□□□□□ -0.42
PRRC2B-203ENST00000405995 NAP1L1P55209 391 aaKnown RBP12.45□□□□□ -0.42
PRRC2B-203ENST00000405995 TNNT1P13805 278 aa12.44□□□□□ -0.42
PRRC2B-203ENST00000405995 ZNF622Q969S3 477 aaKnown RBP eCLIP12.44□□□□□ -0.422e-8■□□□□ 10.9
PRRC2B-203ENST00000405995 EIF3AQ14152 1382 aaKnown RBP12.44□□□□□ -0.42
PRRC2B-203ENST00000405995 TCHPQ9BT92 498 aa12.44□□□□□ -0.42
PRRC2B-203ENST00000405995 CFDP1Q9UEE9 299 aaPredicted RBP12.44□□□□□ -0.42
PRRC2B-203ENST00000405995 GTPBP4Q9BZE4 634 aaKnown RBP12.44□□□□□ -0.42
PRRC2B-203ENST00000405995 BECN2A8MW95 431 aa12.43□□□□□ -0.42
PRRC2B-203ENST00000405995 RNF168Q8IYW5 571 aaPredicted RBP12.43□□□□□ -0.42
PRRC2B-203ENST00000405995 FRAT1Q92837 279 aaPredicted RBP12.43□□□□□ -0.42
PRRC2B-203ENST00000405995 SPAG9O60271 1321 aaKnown RBP12.43□□□□□ -0.42
PRRC2B-203ENST00000405995 IL27Q8NEV9 243 aa12.43□□□□□ -0.42
PRRC2B-203ENST00000405995 ERLIN1O75477 346 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms