RNA–Protein interactions for RNA: ENST00000404816.6

LTBP1-203, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene LTBP1, Length 6,333 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-203ENST00000404816 PAK3O75914 559 aaPredicted RBP22.58■■□□□ 1.21
LTBP1-203ENST00000404816 BCL2L13Q9BXK5 485 aa22.58■■□□□ 1.21
LTBP1-203ENST00000404816 TMX4Q9H1E5 349 aaPredicted RBP22.56■■□□□ 1.2
LTBP1-203ENST00000404816 RALBP1Q15311 655 aa22.56■■□□□ 1.2
LTBP1-203ENST00000404816 RRP7AQ9Y3A4 280 aaKnown RBP22.56■■□□□ 1.2
LTBP1-203ENST00000404816 HTATSF1O43719 755 aaKnown RBP22.56■■□□□ 1.2
LTBP1-203ENST00000404816 ROCK2O75116 1388 aaKnown RBP22.56■■□□□ 1.2
LTBP1-203ENST00000404816 PHF14O94880 888 aa22.55■■□□□ 1.2
LTBP1-203ENST00000404816 CENPJQ9HC77 1338 aaPredicted RBP22.55■■□□□ 1.2
LTBP1-203ENST00000404816 SLC4A10Q6U841 1118 aa22.54■■□□□ 1.2
LTBP1-203ENST00000404816 PKD2Q13563 968 aa22.53■■□□□ 1.2
LTBP1-203ENST00000404816 SETQ01105 290 aaPredicted RBP22.53■■□□□ 1.2
LTBP1-203ENST00000404816 CHMP3Q9Y3E7 222 aa22.52■■□□□ 1.2
LTBP1-203ENST00000404816 ST18O60284 1047 aa22.51■■□□□ 1.19
LTBP1-203ENST00000404816 RRP1P56182 461 aaKnown RBP22.51■■□□□ 1.19
LTBP1-203ENST00000404816 WWC1Q8IX03 1113 aa22.5■■□□□ 1.19
LTBP1-203ENST00000404816 PRKCSHP14314 528 aaPredicted RBP22.5■■□□□ 1.19
LTBP1-203ENST00000404816 R3HCC1Q9Y3T6 440 aaKnown RBP22.5■■□□□ 1.19
LTBP1-203ENST00000404816 CENPQQ7L2Z9 268 aaPredicted RBP22.49■■□□□ 1.19
LTBP1-203ENST00000404816 FAM43AQ8N2R8 423 aa22.49■■□□□ 1.19
LTBP1-203ENST00000404816 CSPP1Q1MSJ5 1256 aa22.49■■□□□ 1.19
LTBP1-203ENST00000404816 NFKBIBQ15653 356 aa22.48■■□□□ 1.19
LTBP1-203ENST00000404816 G3V3G9 751 aa22.47■■□□□ 1.19
LTBP1-203ENST00000404816 RBM10P98175 930 aaKnown RBP22.47■■□□□ 1.19
LTBP1-203ENST00000404816 DCAF8Q5TAQ9 597 aa22.47■■□□□ 1.19
LTBP1-203ENST00000404816 PES1O00541 588 aaKnown RBP22.47■■□□□ 1.19
LTBP1-203ENST00000404816 CSB-PGBD3P0DP91 1061 aa22.47■■□□□ 1.19
LTBP1-203ENST00000404816 ANKRD45Q5TZF3 282 aa22.45■■□□□ 1.19
LTBP1-203ENST00000404816 VPS53Q5VIR6 699 aa22.45■■□□□ 1.18
LTBP1-203ENST00000404816 RILPL2Q969X0 211 aa22.45■■□□□ 1.18
LTBP1-203ENST00000404816 KIF16BQ96L93 1317 aa22.45■■□□□ 1.18
LTBP1-203ENST00000404816 FBXW7Q969H0 707 aa22.44■■□□□ 1.18
LTBP1-203ENST00000404816 TOP2AP11388 1531 aaKnown RBP22.44■■□□□ 1.18
LTBP1-203ENST00000404816 TPM3P06753 285 aa22.44■■□□□ 1.18
LTBP1-203ENST00000404816 MPHOSPH9Q99550 1183 aa22.44■■□□□ 1.18
LTBP1-203ENST00000404816 KANK1Q14678 1352 aa22.44■■□□□ 1.18
LTBP1-203ENST00000404816 SKOR2Q2VWA4 1001 aaPredicted RBP22.43■■□□□ 1.18
LTBP1-203ENST00000404816 COG6Q9Y2V7 657 aa22.43■■□□□ 1.18
LTBP1-203ENST00000404816 RASSF8Q8NHQ8 419 aa22.43■■□□□ 1.18
LTBP1-203ENST00000404816 GOLGA6L19H0YKK7 550 aa22.42■■□□□ 1.18
LTBP1-203ENST00000404816 CEP89Q96ST8 783 aa22.42■■□□□ 1.18
LTBP1-203ENST00000404816 SF3A1Q15459 793 aaKnown RBP22.41■■□□□ 1.18
LTBP1-203ENST00000404816 SMARCA2P51531 1590 aa22.41■■□□□ 1.18
LTBP1-203ENST00000404816 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.41■■□□□ 1.18
LTBP1-203ENST00000404816 GGT6Q6P531 493 aa22.4■■□□□ 1.18
LTBP1-203ENST00000404816 L3MBTL2Q969R5 705 aa22.4■■□□□ 1.18
LTBP1-203ENST00000404816 MCTP1Q6DN14 999 aa22.39■■□□□ 1.18
LTBP1-203ENST00000404816 GORABQ5T7V8 394 aa22.39■■□□□ 1.18
LTBP1-203ENST00000404816 ELL2O00472 640 aaPredicted RBP22.39■■□□□ 1.17
LTBP1-203ENST00000404816 H3BQV1 296 aa22.38■■□□□ 1.17
LTBP1-203ENST00000404816 IFFO2Q5TF58 517 aa22.38■■□□□ 1.17
LTBP1-203ENST00000404816 HDGFL2Q7Z4V5 671 aaPredicted RBP22.38■■□□□ 1.17
LTBP1-203ENST00000404816 BECN2A8MW95 431 aa22.38■■□□□ 1.17
LTBP1-203ENST00000404816 NUTM2DQ5VT03 806 aaPredicted RBP22.37■■□□□ 1.17
LTBP1-203ENST00000404816 TAF7LQ5H9L4 462 aa22.35■■□□□ 1.17
LTBP1-203ENST00000404816 NLRP13Q86W25 1043 aa22.35■■□□□ 1.17
LTBP1-203ENST00000404816 CNKSR2Q8WXI2 1034 aa22.34■■□□□ 1.17
LTBP1-203ENST00000404816 PDE3BQ13370 1112 aa22.34■■□□□ 1.17
LTBP1-203ENST00000404816 GPATCH3Q96I76 525 aa22.34■■□□□ 1.17
LTBP1-203ENST00000404816 TPD52L1Q16890 204 aaPredicted RBP22.33■■□□□ 1.17
LTBP1-203ENST00000404816 FMN1Q68DA7 1419 aa22.33■■□□□ 1.17
LTBP1-203ENST00000404816 HMMRO75330 724 aa22.33■■□□□ 1.16
LTBP1-203ENST00000404816 TDRD9Q8NDG6 1382 aaKnown RBP22.32■■□□□ 1.16
LTBP1-203ENST00000404816 RAPGEF2Q9Y4G8 1499 aa22.32■■□□□ 1.16
LTBP1-203ENST00000404816 STK31Q9BXU1 1019 aa22.32■■□□□ 1.16
LTBP1-203ENST00000404816 HOMER1Q86YM7 354 aa22.32■■□□□ 1.16
LTBP1-203ENST00000404816 ZBED9Q6R2W3 1325 aa22.32■■□□□ 1.16
LTBP1-203ENST00000404816 PODXL2Q9NZ53 605 aa22.31■■□□□ 1.16
LTBP1-203ENST00000404816 CHMP5Q9NZZ3 219 aa22.31■■□□□ 1.16
LTBP1-203ENST00000404816 TEX35Q5T0J7 233 aa22.31■■□□□ 1.16
LTBP1-203ENST00000404816 TOMM22Q9NS69 142 aa22.31■■□□□ 1.16
LTBP1-203ENST00000404816 MAPK8IP2Q13387 824 aaPredicted RBP22.3■■□□□ 1.16
LTBP1-203ENST00000404816 RNF214Q8ND24 703 aa22.3■■□□□ 1.16
LTBP1-203ENST00000404816 MARCH6O60337 910 aa22.3■■□□□ 1.16
LTBP1-203ENST00000404816 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
LTBP1-203ENST00000404816 IFT57Q9NWB7 429 aa22.3■■□□□ 1.16
LTBP1-203ENST00000404816 FOSBP53539 338 aa22.3■■□□□ 1.16
LTBP1-203ENST00000404816 MYBBP1AQ9BQG0 1328 aaKnown RBP22.29■■□□□ 1.16
LTBP1-203ENST00000404816 GPS2Q13227 327 aa22.29■■□□□ 1.16
LTBP1-203ENST00000404816 FHOD3Q2V2M9 1422 aa22.29■■□□□ 1.16
LTBP1-203ENST00000404816 FAM184AQ8NB25 1140 aa22.28■■□□□ 1.16
LTBP1-203ENST00000404816 FRAT2O75474 233 aaPredicted RBP22.28■■□□□ 1.16
LTBP1-203ENST00000404816 HDGFP51858 240 aaKnown RBP22.28■■□□□ 1.16
LTBP1-203ENST00000404816 NUP155O75694 1391 aa22.28■■□□□ 1.16
LTBP1-203ENST00000404816 PRKRIP1Q9H875 184 aaPredicted RBP22.27■■□□□ 1.16
LTBP1-203ENST00000404816 NASPP49321 788 aaPredicted RBP22.26■■□□□ 1.15
LTBP1-203ENST00000404816 LTV1Q96GA3 475 aaPredicted RBP22.26■■□□□ 1.15
LTBP1-203ENST00000404816 KIF15Q9NS87 1388 aa22.26■■□□□ 1.15
LTBP1-203ENST00000404816 RUSC2Q8N2Y8 1516 aa22.25■■□□□ 1.15
LTBP1-203ENST00000404816 PANK3Q9H999 370 aa22.25■■□□□ 1.15
LTBP1-203ENST00000404816 CALRP27797 417 aaKnown RBP22.23■■□□□ 1.15
LTBP1-203ENST00000404816 DHX57Q6P158 1386 aaKnown RBP22.23■■□□□ 1.15
LTBP1-203ENST00000404816 CCDC34Q96HJ3 373 aa22.22■■□□□ 1.15
LTBP1-203ENST00000404816 NUTM2FA1L443 756 aa22.22■■□□□ 1.15
LTBP1-203ENST00000404816 MPNDQ8N594 471 aa22.22■■□□□ 1.15
LTBP1-203ENST00000404816 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.22■■□□□ 1.15
LTBP1-203ENST00000404816 CARMIL2Q6F5E8 1435 aa22.22■■□□□ 1.15
LTBP1-203ENST00000404816 BICD2Q8TD16 824 aa22.21■■□□□ 1.15
LTBP1-203ENST00000404816 ANKRD30AQ9BXX3 1397 aa22.21■■□□□ 1.15
LTBP1-203ENST00000404816 SPAG9O60271 1321 aaKnown RBP22.2■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms