RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 CRBNQ96SW2 442 aa22.52■■□□□ 1.2
SNED1-204ENST00000401884 EHBP1L1Q8N3D4 1523 aa22.52■■□□□ 1.2
SNED1-204ENST00000401884 CC2D2AQ9P2K1 1620 aa22.52■■□□□ 1.2
SNED1-204ENST00000401884 HSP90AB1P08238 724 aaKnown RBP22.52■■□□□ 1.2
SNED1-204ENST00000401884 CCDC184Q52MB2 194 aa22.52■■□□□ 1.2
SNED1-204ENST00000401884 RRP7AQ9Y3A4 280 aaKnown RBP22.52■■□□□ 1.2
SNED1-204ENST00000401884 SPRYD3Q8NCJ5 442 aa22.51■■□□□ 1.19
SNED1-204ENST00000401884 HDGFP51858 240 aaKnown RBP22.51■■□□□ 1.19
SNED1-204ENST00000401884 ITPRIPQ8IWB1 547 aa22.51■■□□□ 1.19
SNED1-204ENST00000401884 TERF2IPQ9NYB0 399 aa22.5■■□□□ 1.19
SNED1-204ENST00000401884 SMC4Q9NTJ3 1288 aa22.49■■□□□ 1.19
SNED1-204ENST00000401884 ABCA10Q8WWZ4 1543 aa22.49■■□□□ 1.19
SNED1-204ENST00000401884 HSCBQ8IWL3 235 aa22.49■■□□□ 1.19
SNED1-204ENST00000401884 PMFBP1Q8TBY8 1022 aa22.49■■□□□ 1.19
SNED1-204ENST00000401884 DNMBPQ6XZF7 1577 aa22.49■■□□□ 1.19
SNED1-204ENST00000401884 SLKQ9H2G2 1235 aaPredicted RBP22.49■■□□□ 1.19
SNED1-204ENST00000401884 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
SNED1-204ENST00000401884 CENPQQ7L2Z9 268 aaPredicted RBP22.46■■□□□ 1.19
SNED1-204ENST00000401884 MAP3K1Q13233 1512 aa22.46■■□□□ 1.19
SNED1-204ENST00000401884 E9PSI1 815 aa22.45■■□□□ 1.18
SNED1-204ENST00000401884 HAP1P54257 671 aaPredicted RBP22.45■■□□□ 1.18
SNED1-204ENST00000401884 NBPF1Q3BBV0 1214 aa22.45■■□□□ 1.18
SNED1-204ENST00000401884 PCF11O94913 1555 aaKnown RBP22.44■■□□□ 1.18
SNED1-204ENST00000401884 BCL2L13Q9BXK5 485 aa22.44■■□□□ 1.18
SNED1-204ENST00000401884 BRD4O60885 1362 aaPredicted RBP22.44■■□□□ 1.18
SNED1-204ENST00000401884 KIAA1107Q9UPP5 1409 aa22.44■■□□□ 1.18
SNED1-204ENST00000401884 TROQ12816 1431 aaPredicted RBP22.43■■□□□ 1.18
SNED1-204ENST00000401884 LMOD2Q6P5Q4 547 aa22.43■■□□□ 1.18
SNED1-204ENST00000401884 CALD1Q05682 793 aaKnown RBP22.41■■□□□ 1.18
SNED1-204ENST00000401884 PNISRQ8TF01 805 aaKnown RBP22.4■■□□□ 1.18
SNED1-204ENST00000401884 STAC3Q96MF2 364 aa22.39■■□□□ 1.18
SNED1-204ENST00000401884 DAPK1P53355 1430 aa22.39■■□□□ 1.18
SNED1-204ENST00000401884 VGFO15240 615 aaPredicted RBP22.39■■□□□ 1.18
SNED1-204ENST00000401884 AFAP1Q8N556 730 aa22.39■■□□□ 1.18
SNED1-204ENST00000401884 CDCA7LQ96GN5 454 aa22.39■■□□□ 1.17
SNED1-204ENST00000401884 COG6Q9Y2V7 657 aa22.39■■□□□ 1.17
SNED1-204ENST00000401884 EPRSP07814 1512 aaKnown RBP22.39■■□□□ 1.17
SNED1-204ENST00000401884 APBB1O00213 710 aa22.38■■□□□ 1.17
SNED1-204ENST00000401884 FAM161AQ3B820 660 aa22.38■■□□□ 1.17
SNED1-204ENST00000401884 CGNL1Q0VF96 1302 aa22.38■■□□□ 1.17
SNED1-204ENST00000401884 ADAMTS8Q9UP79 889 aa22.38■■□□□ 1.17
SNED1-204ENST00000401884 DNAJC5BQ9UF47 199 aa22.38■■□□□ 1.17
SNED1-204ENST00000401884 C11orf95C9JLR9 678 aaPredicted RBP22.37■■□□□ 1.17
SNED1-204ENST00000401884 RTF1Q92541 710 aaKnown RBP22.37■■□□□ 1.17
SNED1-204ENST00000401884 CDK13Q14004 1512 aaKnown RBP22.36■■□□□ 1.17
SNED1-204ENST00000401884 C9orf84Q5VXU9 1444 aa22.36■■□□□ 1.17
SNED1-204ENST00000401884 SLC4A3P48751 1232 aa22.36■■□□□ 1.17
SNED1-204ENST00000401884 SUPT6HQ7KZ85 1726 aaKnown RBP22.36■■□□□ 1.17
SNED1-204ENST00000401884 MFAP1P55081 439 aaKnown RBP22.35■■□□□ 1.17
SNED1-204ENST00000401884 GLIPR1L2Q4G1C9 344 aa22.35■■□□□ 1.17
SNED1-204ENST00000401884 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.35■■□□□ 1.17
SNED1-204ENST00000401884 MRC2Q9UBG0 1479 aa22.35■■□□□ 1.17
SNED1-204ENST00000401884 BIVM-ERCC5R4GMW8 1640 aa22.34■■□□□ 1.17
SNED1-204ENST00000401884 EVC2Q86UK5 1308 aa22.34■■□□□ 1.17
SNED1-204ENST00000401884 TPRNQ4KMQ1 711 aa22.34■■□□□ 1.17
SNED1-204ENST00000401884 NGEFQ8N5V2 710 aa22.33■■□□□ 1.17
SNED1-204ENST00000401884 IFT140Q96RY7 1462 aa22.33■■□□□ 1.17
SNED1-204ENST00000401884 HECW1Q76N89 1606 aa22.33■■□□□ 1.17
SNED1-204ENST00000401884 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
SNED1-204ENST00000401884 UNC13AQ9UPW8 1703 aa22.32■■□□□ 1.16
SNED1-204ENST00000401884 OS9Q13438 667 aaPredicted RBP22.31■■□□□ 1.16
SNED1-204ENST00000401884 ROCK1Q13464 1354 aa22.31■■□□□ 1.16
SNED1-204ENST00000401884 ANKRD30BQ9BXX2 1392 aa22.31■■□□□ 1.16
SNED1-204ENST00000401884 L1TD1Q5T7N2 865 aaKnown RBP22.3■■□□□ 1.16
SNED1-204ENST00000401884 AKNAQ7Z591 1439 aa22.3■■□□□ 1.16
SNED1-204ENST00000401884 CFAP70Q5T0N1 1121 aa22.29■■□□□ 1.16
SNED1-204ENST00000401884 USP35Q9P2H5 1018 aa22.29■■□□□ 1.16
SNED1-204ENST00000401884 KIAA0586Q9BVV6 1533 aa22.29■■□□□ 1.16
SNED1-204ENST00000401884 PTMAP06454 111 aaKnown RBP22.28■■□□□ 1.16
SNED1-204ENST00000401884 ZKSCAN2Q63HK3 967 aa22.28■■□□□ 1.16
SNED1-204ENST00000401884 GZF1Q9H116 711 aaPredicted RBP22.28■■□□□ 1.16
SNED1-204ENST00000401884 CFAP44Q96MT7 982 aa22.28■■□□□ 1.16
SNED1-204ENST00000401884 MINK1Q8N4C8 1332 aaPredicted RBP22.28■■□□□ 1.16
SNED1-204ENST00000401884 SNAPC4Q5SXM2 1469 aa22.27■■□□□ 1.16
SNED1-204ENST00000401884 A0A0G2JS52 829 aa22.27■■□□□ 1.16
SNED1-204ENST00000401884 ELL2O00472 640 aaPredicted RBP22.27■■□□□ 1.16
SNED1-204ENST00000401884 PPP2R1AP30153 589 aa22.25■■□□□ 1.15
SNED1-204ENST00000401884 ARHGAP5Q13017 1502 aa22.25■■□□□ 1.15
SNED1-204ENST00000401884 NUTM2FA1L443 756 aa22.23■■□□□ 1.15
SNED1-204ENST00000401884 TMEM132EQ6IEE7 984 aa22.23■■□□□ 1.15
SNED1-204ENST00000401884 NAP1L5Q96NT1 182 aaPredicted RBP22.23■■□□□ 1.15
SNED1-204ENST00000401884 ABCC5O15440 1437 aa22.22■■□□□ 1.15
SNED1-204ENST00000401884 RUNDC1Q96C34 613 aa22.22■■□□□ 1.15
SNED1-204ENST00000401884 KCNJ4P48050 445 aa22.22■■□□□ 1.15
SNED1-204ENST00000401884 IQGAP2Q13576 1575 aa22.21■■□□□ 1.15
SNED1-204ENST00000401884 LMOD3Q0VAK6 560 aa22.21■■□□□ 1.15
SNED1-204ENST00000401884 CUL7Q14999 1698 aa22.21■■□□□ 1.15
SNED1-204ENST00000401884 GBP4Q96PP9 640 aa22.21■■□□□ 1.15
SNED1-204ENST00000401884 PTPN23Q9H3S7 1636 aa22.21■■□□□ 1.15
SNED1-204ENST00000401884 PAK3O75914 559 aaPredicted RBP22.2■■□□□ 1.14
SNED1-204ENST00000401884 MCCP23508 829 aa22.19■■□□□ 1.14
SNED1-204ENST00000401884 STK31Q9BXU1 1019 aa22.18■■□□□ 1.14
SNED1-204ENST00000401884 SMG6Q86US8 1419 aaKnown RBP22.18■■□□□ 1.14
SNED1-204ENST00000401884 MAPKBP1O60336 1514 aa22.18■■□□□ 1.14
SNED1-204ENST00000401884 LAMC3Q9Y6N6 1575 aa22.16■■□□□ 1.14
SNED1-204ENST00000401884 MTHFSP49914 203 aa22.16■■□□□ 1.14
SNED1-204ENST00000401884 SLC4A10Q6U841 1118 aa22.16■■□□□ 1.14
SNED1-204ENST00000401884 PTPRKQ15262 1439 aa22.16■■□□□ 1.14
SNED1-204ENST00000401884 DIAPH1O60610 1272 aaKnown RBP22.16■■□□□ 1.14
SNED1-204ENST00000401884 PLCB2Q00722 1185 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms