RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 PHF14O94880 888 aa6.23□□□□□ -1.41
RPS4XP3-201ENST00000398541 PDIA6Q15084 440 aa6.23□□□□□ -1.41
RPS4XP3-201ENST00000398541 TYW1BQ6NUM6 668 aa6.22□□□□□ -1.41
RPS4XP3-201ENST00000398541 DDX12PQ92771 950 aa6.22□□□□□ -1.41
RPS4XP3-201ENST00000398541 ARIH1Q9Y4X5 557 aaPredicted RBP6.22□□□□□ -1.41
RPS4XP3-201ENST00000398541 SPDYE16A6NNV3 312 aaPredicted RBP6.21□□□□□ -1.42
RPS4XP3-201ENST00000398541 FBXW7Q969H0 707 aa6.21□□□□□ -1.42
RPS4XP3-201ENST00000398541 EPAS1Q99814 870 aa6.21□□□□□ -1.42
RPS4XP3-201ENST00000398541 KDM2AQ9Y2K7 1162 aa6.21□□□□□ -1.42
RPS4XP3-201ENST00000398541 HRO43593 1189 aa6.2□□□□□ -1.42
RPS4XP3-201ENST00000398541 VPS9D1Q9Y2B5 631 aa6.2□□□□□ -1.42
RPS4XP3-201ENST00000398541 ZBED2Q9BTP6 218 aa6.19□□□□□ -1.42
RPS4XP3-201ENST00000398541 SLC4A5Q9BY07 1137 aa6.19□□□□□ -1.42
RPS4XP3-201ENST00000398541 NBR1Q14596 966 aa6.18□□□□□ -1.42
RPS4XP3-201ENST00000398541 ERICH6Q7L0X2 663 aa6.18□□□□□ -1.42
RPS4XP3-201ENST00000398541 RBM33Q96EV2 1170 aaKnown RBP6.18□□□□□ -1.42
RPS4XP3-201ENST00000398541 STAC3Q96MF2 364 aa6.18□□□□□ -1.42
RPS4XP3-201ENST00000398541 PPP1R3GB7ZBB8 358 aa6.17□□□□□ -1.42
RPS4XP3-201ENST00000398541 COL9A1P20849 921 aa6.17□□□□□ -1.42
RPS4XP3-201ENST00000398541 C6orf132Q5T0Z8 1188 aa6.17□□□□□ -1.42
RPS4XP3-201ENST00000398541 GRXCR2A6NFK2 248 aa6.16□□□□□ -1.42
RPS4XP3-201ENST00000398541 KCNV2Q8TDN2 545 aa6.16□□□□□ -1.42
RPS4XP3-201ENST00000398541 MAP3K7O43318 606 aa6.15□□□□□ -1.42
RPS4XP3-201ENST00000398541 EN1Q05925 392 aaPredicted RBP6.15□□□□□ -1.42
RPS4XP3-201ENST00000398541 PROX2Q3B8N5 592 aa6.15□□□□□ -1.42
RPS4XP3-201ENST00000398541 ARHGEF1Q92888 912 aaKnown RBP6.15□□□□□ -1.42
RPS4XP3-201ENST00000398541 GTF3C3Q9Y5Q9 886 aa6.15□□□□□ -1.42
RPS4XP3-201ENST00000398541 BHMG1C9JSJ3 638 aaPredicted RBP6.14□□□□□ -1.43
RPS4XP3-201ENST00000398541 TSR1Q2NL82 804 aaKnown RBP6.13□□□□□ -1.43
RPS4XP3-201ENST00000398541 HOMEZQ8IX15 550 aa6.13□□□□□ -1.43
RPS4XP3-201ENST00000398541 KCTD12Q96CX2 325 aaKnown RBP6.13□□□□□ -1.43
RPS4XP3-201ENST00000398541 OSBPP22059 807 aa6.12□□□□□ -1.43
RPS4XP3-201ENST00000398541 PRIM1P49642 420 aaKnown RBP6.12□□□□□ -1.43
RPS4XP3-201ENST00000398541 P3H3Q8IVL6 736 aa6.12□□□□□ -1.43
RPS4XP3-201ENST00000398541 MRPL50Q8N5N7 158 aaKnown RBP6.12□□□□□ -1.43
RPS4XP3-201ENST00000398541 NBPF3Q9H094 633 aa6.12□□□□□ -1.43
RPS4XP3-201ENST00000398541 RABGEF1Q9UJ41 708 aa6.12□□□□□ -1.43
RPS4XP3-201ENST00000398541 KIAA1468Q9P260 1216 aa6.11□□□□□ -1.43
RPS4XP3-201ENST00000398541 HCSTQ9UBK5 93 aa6.11□□□□□ -1.43
RPS4XP3-201ENST00000398541 GOLGA8CPA6NN73 597 aa6.1□□□□□ -1.43
RPS4XP3-201ENST00000398541 TRIM6-TRIM34B2RNG4 842 aa6.1□□□□□ -1.43
RPS4XP3-201ENST00000398541 ONECUT3O60422 494 aaPredicted RBP6.09□□□□□ -1.43
RPS4XP3-201ENST00000398541 MLLT3P42568 568 aaPredicted RBP6.09□□□□□ -1.43
RPS4XP3-201ENST00000398541 WNT2BQ93097 391 aa6.08□□□□□ -1.44
RPS4XP3-201ENST00000398541 CDHR5Q9HBB8 845 aa6.08□□□□□ -1.44
RPS4XP3-201ENST00000398541 PTPN5P54829 565 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 THSD4Q6ZMP0 1018 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 LAPTM4BQ86VI4 370 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 PACS2Q86VP3 889 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 CERKQ8TCT0 537 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 CDCA7LQ96GN5 454 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 SEPT9Q9UHD8 586 aaPredicted RBP6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 TSKSQ9UJT2 592 aa6.07□□□□□ -1.44
RPS4XP3-201ENST00000398541 SEMA3EO15041 775 aa6.06□□□□□ -1.44
RPS4XP3-201ENST00000398541 PRSS12P56730 875 aa6.06□□□□□ -1.44
RPS4XP3-201ENST00000398541 ANKK1Q8NFD2 765 aa6.05□□□□□ -1.44
RPS4XP3-201ENST00000398541 ZFRQ96KR1 1074 aaKnown RBP6.05□□□□□ -1.44
RPS4XP3-201ENST00000398541 FAM98CQ17RN3 349 aaKnown RBP6.04□□□□□ -1.44
RPS4XP3-201ENST00000398541 TMEM132AQ24JP5 1023 aa6.04□□□□□ -1.44
RPS4XP3-201ENST00000398541 NPDC1Q9NQX5 325 aaPredicted RBP6.04□□□□□ -1.44
RPS4XP3-201ENST00000398541 FAM198AQ9UFP1 575 aa6.04□□□□□ -1.44
RPS4XP3-201ENST00000398541 SOWAHBA6NEL2 793 aa6.02□□□□□ -1.45
RPS4XP3-201ENST00000398541 C3orf80F5H4A9 247 aa6.02□□□□□ -1.45
RPS4XP3-201ENST00000398541 SMAPO00193 183 aa6.02□□□□□ -1.45
RPS4XP3-201ENST00000398541 BCAMP50895 628 aa6.02□□□□□ -1.45
RPS4XP3-201ENST00000398541 PLA2G2EQ9NZK7 142 aa6.02□□□□□ -1.45
RPS4XP3-201ENST00000398541 RBM27Q9P2N5 1060 aaKnown RBP6.02□□□□□ -1.45
RPS4XP3-201ENST00000398541 NUTM2FA1L443 756 aa6.01□□□□□ -1.45
RPS4XP3-201ENST00000398541 TESPA1A2RU30 521 aaPredicted RBP6.01□□□□□ -1.45
RPS4XP3-201ENST00000398541 NBPF26B4DH59 902 aa6.01□□□□□ -1.45
RPS4XP3-201ENST00000398541 TATDN2Q93075 761 aa6.01□□□□□ -1.45
RPS4XP3-201ENST00000398541 PNMA3Q9UL41 463 aa6.01□□□□□ -1.45
RPS4XP3-201ENST00000398541 PTGDRQ13258 359 aa6□□□□□ -1.45
RPS4XP3-201ENST00000398541 PADI6Q6TGC4 694 aa6□□□□□ -1.45
RPS4XP3-201ENST00000398541 NUDT18Q6ZVK8 323 aa6□□□□□ -1.45
RPS4XP3-201ENST00000398541 TTC13Q8NBP0 860 aa6□□□□□ -1.45
RPS4XP3-201ENST00000398541 C14orf37Q86TY3 774 aa5.99□□□□□ -1.45
RPS4XP3-201ENST00000398541 LRCH3Q96II8 777 aa5.99□□□□□ -1.45
RPS4XP3-201ENST00000398541 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.99□□□□□ -1.45
RPS4XP3-201ENST00000398541 SMYD5Q6GMV2 418 aa5.98□□□□□ -1.45
RPS4XP3-201ENST00000398541 SAMD7Q7Z3H4 446 aa5.98□□□□□ -1.45
RPS4XP3-201ENST00000398541 WBP1LQ9NX94 342 aa5.98□□□□□ -1.45
RPS4XP3-201ENST00000398541 RBM26Q5T8P6 1007 aaKnown RBP5.97□□□□□ -1.45
RPS4XP3-201ENST00000398541 TSR3Q9UJK0 312 aaKnown RBP5.97□□□□□ -1.45
RPS4XP3-201ENST00000398541 HPS5Q9UPZ3 1129 aa5.97□□□□□ -1.45
RPS4XP3-201ENST00000398541 FCHSD2O94868 740 aa5.96□□□□□ -1.46
RPS4XP3-201ENST00000398541 NYAP1Q6ZVC0 841 aa5.96□□□□□ -1.46
RPS4XP3-201ENST00000398541 HDGFP51858 240 aaKnown RBP5.95□□□□□ -1.46
RPS4XP3-201ENST00000398541 RANGAP1P46060 587 aaPredicted RBP5.94□□□□□ -1.46
RPS4XP3-201ENST00000398541 PPP4CP60510 307 aa5.94□□□□□ -1.46
RPS4XP3-201ENST00000398541 EYA1Q99502 592 aa5.94□□□□□ -1.46
RPS4XP3-201ENST00000398541 RNF40O75150 1001 aa5.93□□□□□ -1.46
RPS4XP3-201ENST00000398541 FAM161AQ3B820 660 aa5.93□□□□□ -1.46
RPS4XP3-201ENST00000398541 ADGRG1Q9Y653 693 aa5.93□□□□□ -1.46
RPS4XP3-201ENST00000398541 HIC1Q14526 733 aa5.92□□□□□ -1.46
RPS4XP3-201ENST00000398541 SWT1Q5T5J6 900 aaKnown RBP5.92□□□□□ -1.46
RPS4XP3-201ENST00000398541 IFFO2Q5TF58 517 aa5.92□□□□□ -1.46
RPS4XP3-201ENST00000398541 RBM46Q8TBY0 533 aaKnown RBP5.92□□□□□ -1.46
RPS4XP3-201ENST00000398541 ITGBL1O95965 494 aaPredicted RBP5.91□□□□□ -1.46
RPS4XP3-201ENST00000398541 GNPATO15228 680 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms