RNA–Protein interactions for RNA: ENST00000397961.6

PFKL-202, Transcript of phosphofructokinase, liver type, humanhuman

TSL 1 (best)

Gene PFKL, Length 3,390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKL-202ENST00000397961 MAGI1Q96QZ7 1491 aaPredicted RBP19.72■□□□□ 0.75
PFKL-202ENST00000397961 WDR43Q15061 677 aaKnown RBP eCLIP19.72■□□□□ 0.753e-7■■□□□ 14.2
PFKL-202ENST00000397961 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
PFKL-202ENST00000397961 DHX29Q7Z478 1369 aaKnown RBP19.69■□□□□ 0.74
PFKL-202ENST00000397961 MYBBP1AQ9BQG0 1328 aaKnown RBP19.69■□□□□ 0.74
PFKL-202ENST00000397961 ANP32AP39687 249 aaKnown RBP19.69■□□□□ 0.74
PFKL-202ENST00000397961 TMF1P82094 1093 aa19.69■□□□□ 0.74
PFKL-202ENST00000397961 KTN1Q86UP2 1357 aaKnown RBP19.68■□□□□ 0.74
PFKL-202ENST00000397961 ADAMTS8Q9UP79 889 aa19.67■□□□□ 0.74
PFKL-202ENST00000397961 PLPPR3Q6T4P5 718 aa19.67■□□□□ 0.74
PFKL-202ENST00000397961 ARHGAP5Q13017 1502 aa19.66■□□□□ 0.74
PFKL-202ENST00000397961 RGS3P49796 1198 aa19.66■□□□□ 0.74
PFKL-202ENST00000397961 NLRP13Q86W25 1043 aa19.66■□□□□ 0.74
PFKL-202ENST00000397961 SPATA31E1Q6ZUB1 1445 aa19.66■□□□□ 0.74
PFKL-202ENST00000397961 EFCAB2Q5VUJ9 269 aa19.66■□□□□ 0.74
PFKL-202ENST00000397961 SPAG9O60271 1321 aaKnown RBP19.66■□□□□ 0.74
PFKL-202ENST00000397961 RRP7AQ9Y3A4 280 aaKnown RBP19.65■□□□□ 0.74
PFKL-202ENST00000397961 PLEKHH2Q8IVE3 1493 aa19.65■□□□□ 0.74
PFKL-202ENST00000397961 DNMT1P26358 1616 aaKnown RBP19.64■□□□□ 0.73
PFKL-202ENST00000397961 DISP3Q9P2K9 1392 aa19.64■□□□□ 0.73
PFKL-202ENST00000397961 SLC4A3P48751 1232 aa19.64■□□□□ 0.73
PFKL-202ENST00000397961 CFAP70Q5T0N1 1121 aa19.64■□□□□ 0.73
PFKL-202ENST00000397961 C20orf194Q5TEA3 1177 aa19.64■□□□□ 0.73
PFKL-202ENST00000397961 TRAK1Q9UPV9 953 aa19.64■□□□□ 0.73
PFKL-202ENST00000397961 GCC2Q8IWJ2 1684 aa19.62■□□□□ 0.73
PFKL-202ENST00000397961 TMEM132EQ6IEE7 984 aa19.62■□□□□ 0.73
PFKL-202ENST00000397961 RRP1P56182 461 aaKnown RBP19.62■□□□□ 0.73
PFKL-202ENST00000397961 CRBNQ96SW2 442 aa19.61■□□□□ 0.73
PFKL-202ENST00000397961 RALBP1Q15311 655 aa19.61■□□□□ 0.73
PFKL-202ENST00000397961 ZBTB47Q9UFB7 747 aaPredicted RBP19.61■□□□□ 0.73
PFKL-202ENST00000397961 CANXP27824 592 aaKnown RBP19.6■□□□□ 0.73
PFKL-202ENST00000397961 STK26Q9P289 416 aa19.6■□□□□ 0.73
PFKL-202ENST00000397961 NOP58Q9Y2X3 529 aaKnown RBP19.59■□□□□ 0.73
PFKL-202ENST00000397961 FRAT1Q92837 279 aaPredicted RBP19.57■□□□□ 0.72
PFKL-202ENST00000397961 BCL2L13Q9BXK5 485 aa19.57■□□□□ 0.72
PFKL-202ENST00000397961 BCORL1Q5H9F3 1711 aa19.56■□□□□ 0.72
PFKL-202ENST00000397961 APAF1O14727 1248 aa19.55■□□□□ 0.72
PFKL-202ENST00000397961 RTL5Q5HYW3 569 aaPredicted RBP19.55■□□□□ 0.72
PFKL-202ENST00000397961 SYCP2Q9BX26 1530 aa19.54■□□□□ 0.72
PFKL-202ENST00000397961 TESK2Q96S53 571 aa19.52■□□□□ 0.71
PFKL-202ENST00000397961 PPM1GO15355 546 aaPredicted RBP19.5■□□□□ 0.71
PFKL-202ENST00000397961 NPM1P06748 294 aaKnown RBP eCLIP19.5■□□□□ 0.71
PFKL-202ENST00000397961 ERCC6L2Q5T890 1561 aa19.49■□□□□ 0.71
PFKL-202ENST00000397961 CLUAP1Q96AJ1 413 aa19.49■□□□□ 0.71
PFKL-202ENST00000397961 CCDC141Q6ZP82 1450 aa19.49■□□□□ 0.71
PFKL-202ENST00000397961 PER1O15534 1290 aaPredicted RBP19.49■□□□□ 0.71
PFKL-202ENST00000397961 SMG6Q86US8 1419 aaKnown RBP19.48■□□□□ 0.71
PFKL-202ENST00000397961 SCAPERQ9BY12 1400 aa19.48■□□□□ 0.71
PFKL-202ENST00000397961 DAXXQ9UER7 740 aaPredicted RBP19.48■□□□□ 0.71
PFKL-202ENST00000397961 DEKP35659 375 aaKnown RBP19.47■□□□□ 0.71
PFKL-202ENST00000397961 MLECQ14165 292 aa19.47■□□□□ 0.71
PFKL-202ENST00000397961 RTN4Q9NQC3 1192 aaKnown RBP19.47■□□□□ 0.71
PFKL-202ENST00000397961 FANCIQ9NVI1 1328 aa19.47■□□□□ 0.71
PFKL-202ENST00000397961 PPP2R1AP30153 589 aa19.47■□□□□ 0.71
PFKL-202ENST00000397961 NUP160Q12769 1436 aa19.46■□□□□ 0.71
PFKL-202ENST00000397961 TRAPPC8Q9Y2L5 1435 aa19.46■□□□□ 0.71
PFKL-202ENST00000397961 BCAR3O75815 825 aa19.46■□□□□ 0.71
PFKL-202ENST00000397961 RSPH4AQ5TD94 716 aa19.46■□□□□ 0.71
PFKL-202ENST00000397961 SLC12A5Q9H2X9 1139 aa19.45■□□□□ 0.7
PFKL-202ENST00000397961 FAM135AQ9P2D6 1515 aa19.45■□□□□ 0.7
PFKL-202ENST00000397961 ADGRF5Q8IZF2 1346 aa19.44■□□□□ 0.7
PFKL-202ENST00000397961 ARXQ96QS3 562 aa19.44■□□□□ 0.7
PFKL-202ENST00000397961 PDE4AP27815 886 aa19.44■□□□□ 0.7
PFKL-202ENST00000397961 BRD4O60885 1362 aaPredicted RBP19.44■□□□□ 0.7
PFKL-202ENST00000397961 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
PFKL-202ENST00000397961 ERICH6BQ5W0A0 696 aa19.43■□□□□ 0.7
PFKL-202ENST00000397961 MBD5Q9P267 1494 aa19.42■□□□□ 0.7
PFKL-202ENST00000397961 ABCC10Q5T3U5 1492 aa19.42■□□□□ 0.7
PFKL-202ENST00000397961 ERBINQ96RT1 1412 aa19.42■□□□□ 0.7
PFKL-202ENST00000397961 SPINK5Q9NQ38 1064 aaPredicted RBP19.42■□□□□ 0.7
PFKL-202ENST00000397961 PRAG1Q86YV5 1406 aa19.41■□□□□ 0.7
PFKL-202ENST00000397961 U2SURPO15042 1029 aaKnown RBP19.41■□□□□ 0.7
PFKL-202ENST00000397961 RALGAPBQ86X10 1494 aa19.4■□□□□ 0.7
PFKL-202ENST00000397961 MORC1Q86VD1 984 aa19.4■□□□□ 0.7
PFKL-202ENST00000397961 IPO9Q96P70 1041 aaKnown RBP19.4■□□□□ 0.7
PFKL-202ENST00000397961 DMRT2Q9Y5R5 561 aa19.39■□□□□ 0.69
PFKL-202ENST00000397961 GOLGA2Q08379 1002 aa19.39■□□□□ 0.69
PFKL-202ENST00000397961 STAG3Q9UJ98 1225 aa19.39■□□□□ 0.69
PFKL-202ENST00000397961 A2MP01023 1474 aa19.38■□□□□ 0.69
PFKL-202ENST00000397961 CFAP65Q6ZU64 1925 aaKnown RBP19.38■□□□□ 0.69
PFKL-202ENST00000397961 ITSN2Q9NZM3 1697 aa19.38■□□□□ 0.69
PFKL-202ENST00000397961 PLEKHG5O94827 1062 aa19.37■□□□□ 0.69
PFKL-202ENST00000397961 NEFMP07197 916 aa19.37■□□□□ 0.69
PFKL-202ENST00000397961 PLA2R1Q13018 1463 aa19.37■□□□□ 0.69
PFKL-202ENST00000397961 COG6Q9Y2V7 657 aa19.36■□□□□ 0.69
PFKL-202ENST00000397961 CDC42BPAQ5VT25 1732 aa19.36■□□□□ 0.69
PFKL-202ENST00000397961 WASHC2CQ9Y4E1 1318 aa19.36■□□□□ 0.69
PFKL-202ENST00000397961 FBLN1P23142 703 aa19.36■□□□□ 0.69
PFKL-202ENST00000397961 PANK1Q8TE04 598 aa19.36■□□□□ 0.69
PFKL-202ENST00000397961 KDM5CP41229 1560 aa19.35■□□□□ 0.69
PFKL-202ENST00000397961 ADGRL2O95490 1459 aa19.35■□□□□ 0.69
PFKL-202ENST00000397961 ARID4BQ4LE39 1312 aaPredicted RBP19.35■□□□□ 0.69
PFKL-202ENST00000397961 CABP2Q9NPB3 220 aa19.35■□□□□ 0.69
PFKL-202ENST00000397961 SRPK2P78362 688 aaKnown RBP19.35■□□□□ 0.69
PFKL-202ENST00000397961 SPRYD3Q8NCJ5 442 aa19.34■□□□□ 0.69
PFKL-202ENST00000397961 SAMD9LQ8IVG5 1584 aa19.33■□□□□ 0.69
PFKL-202ENST00000397961 SOX12O15370 315 aa19.33■□□□□ 0.68
PFKL-202ENST00000397961 ARHGEF12Q9NZN5 1544 aa19.33■□□□□ 0.68
PFKL-202ENST00000397961 NUTM2FA1L443 756 aa19.32■□□□□ 0.68
PFKL-202ENST00000397961 U2AF1L5P0DN76 240 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms