RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 CNTLNQ9NXG0 1405 aa24.71■■□□□ 1.55
SREBF1-204ENST00000395756 NBPF1Q3BBV0 1214 aa24.7■■□□□ 1.54
SREBF1-204ENST00000395756 UHRF1BP1LA0JNW5 1464 aa24.69■■□□□ 1.54
SREBF1-204ENST00000395756 MRS2Q9HD23 443 aa24.69■■□□□ 1.54
SREBF1-204ENST00000395756 SENP3-EIF4A1A0A087X0R7 540 aa24.69■■□□□ 1.54
SREBF1-204ENST00000395756 MYO5CQ9NQX4 1742 aa24.69■■□□□ 1.54
SREBF1-204ENST00000395756 ROCK2O75116 1388 aaKnown RBP24.66■■□□□ 1.54
SREBF1-204ENST00000395756 FKBP8Q14318 412 aa24.66■■□□□ 1.54
SREBF1-204ENST00000395756 KIF3BO15066 747 aa24.65■■□□□ 1.54
SREBF1-204ENST00000395756 WDR7Q9Y4E6 1490 aa24.63■■□□□ 1.53
SREBF1-204ENST00000395756 SCAPERQ9BY12 1400 aa24.62■■□□□ 1.53
SREBF1-204ENST00000395756 PLA2R1Q13018 1463 aa24.61■■□□□ 1.53
SREBF1-204ENST00000395756 ASXL2Q76L83 1435 aa24.61■■□□□ 1.53
SREBF1-204ENST00000395756 KDM5DQ9BY66 1539 aa24.61■■□□□ 1.53
SREBF1-204ENST00000395756 FANCAO15360 1455 aa24.59■■□□□ 1.53
SREBF1-204ENST00000395756 DUOX2Q9NRD8 1548 aa24.56■■□□□ 1.52
SREBF1-204ENST00000395756 ABCC1P33527 1531 aa24.55■■□□□ 1.52
SREBF1-204ENST00000395756 UHRF1BP1Q6BDS2 1440 aa24.54■■□□□ 1.52
SREBF1-204ENST00000395756 MAST1Q9Y2H9 1570 aa24.52■■□□□ 1.52
SREBF1-204ENST00000395756 NEFLP07196 543 aa24.51■■□□□ 1.51
SREBF1-204ENST00000395756 ERBINQ96RT1 1412 aa24.51■■□□□ 1.51
SREBF1-204ENST00000395756 ADGRL1O94910 1474 aa24.51■■□□□ 1.51
SREBF1-204ENST00000395756 RALGAPBQ86X10 1494 aa24.51■■□□□ 1.51
SREBF1-204ENST00000395756 IRX6P78412 446 aaPredicted RBP24.51■■□□□ 1.51
SREBF1-204ENST00000395756 CYB5RLQ6IPT4 315 aa24.49■■□□□ 1.51
SREBF1-204ENST00000395756 BCORL1Q5H9F3 1711 aa24.49■■□□□ 1.51
SREBF1-204ENST00000395756 GGT6Q6P531 493 aa24.48■■□□□ 1.51
SREBF1-204ENST00000395756 PRAG1Q86YV5 1406 aa24.47■■□□□ 1.51
SREBF1-204ENST00000395756 ANP32EQ9BTT0 268 aa24.47■■□□□ 1.51
SREBF1-204ENST00000395756 A2MP01023 1474 aa24.47■■□□□ 1.51
SREBF1-204ENST00000395756 PLXNC1O60486 1568 aa24.46■■□□□ 1.51
SREBF1-204ENST00000395756 KDM5CP41229 1560 aa24.45■■□□□ 1.5
SREBF1-204ENST00000395756 CHGAP10645 457 aaKnown RBP24.45■■□□□ 1.5
SREBF1-204ENST00000395756 DHX29Q7Z478 1369 aaKnown RBP24.44■■□□□ 1.5
SREBF1-204ENST00000395756 RAPGEF3O95398 923 aa24.44■■□□□ 1.5
SREBF1-204ENST00000395756 UNC13BO14795 1591 aa24.44■■□□□ 1.5
SREBF1-204ENST00000395756 TMC1Q8TDI8 760 aa24.41■■□□□ 1.5
SREBF1-204ENST00000395756 KANK1Q14678 1352 aa24.41■■□□□ 1.5
SREBF1-204ENST00000395756 CD109Q6YHK3 1445 aa24.4■■□□□ 1.5
SREBF1-204ENST00000395756 RTEL1-TNFRSF6BF6WH68 1400 aa24.4■■□□□ 1.5
SREBF1-204ENST00000395756 ZFYVE16Q7Z3T8 1539 aa24.4■■□□□ 1.5
SREBF1-204ENST00000395756 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
SREBF1-204ENST00000395756 IQGAP3Q86VI3 1631 aa24.38■■□□□ 1.49
SREBF1-204ENST00000395756 ARID4BQ4LE39 1312 aaPredicted RBP24.36■■□□□ 1.49
SREBF1-204ENST00000395756 ATP7AQ04656 1500 aa24.36■■□□□ 1.49
SREBF1-204ENST00000395756 CC2D1BQ5T0F9 858 aaKnown RBP24.36■■□□□ 1.49
SREBF1-204ENST00000395756 TESK2Q96S53 571 aa24.33■■□□□ 1.49
SREBF1-204ENST00000395756 SALL2Q9Y467 1007 aaPredicted RBP24.33■■□□□ 1.49
SREBF1-204ENST00000395756 MAGI2Q86UL8 1455 aa24.32■■□□□ 1.48
SREBF1-204ENST00000395756 DISP3Q9P2K9 1392 aa24.32■■□□□ 1.48
SREBF1-204ENST00000395756 ABCA9Q8IUA7 1624 aa24.32■■□□□ 1.48
SREBF1-204ENST00000395756 PANK3Q9H999 370 aa24.31■■□□□ 1.48
SREBF1-204ENST00000395756 ATP10AO60312 1499 aa24.3■■□□□ 1.48
SREBF1-204ENST00000395756 ARAP3Q8WWN8 1544 aa24.3■■□□□ 1.48
SREBF1-204ENST00000395756 TMF1P82094 1093 aa24.29■■□□□ 1.48
SREBF1-204ENST00000395756 ERICH6Q7L0X2 663 aa24.29■■□□□ 1.48
SREBF1-204ENST00000395756 CFAP70Q5T0N1 1121 aa24.28■■□□□ 1.48
SREBF1-204ENST00000395756 NUTM2DQ5VT03 806 aaPredicted RBP24.27■■□□□ 1.48
SREBF1-204ENST00000395756 WASHC2CQ9Y4E1 1318 aa24.26■■□□□ 1.47
SREBF1-204ENST00000395756 UGGT1Q9NYU2 1555 aa24.25■■□□□ 1.47
SREBF1-204ENST00000395756 E9PCH4 1651 aa24.25■■□□□ 1.47
SREBF1-204ENST00000395756 PNISRQ8TF01 805 aaKnown RBP24.24■■□□□ 1.47
SREBF1-204ENST00000395756 ADGRF5Q8IZF2 1346 aa24.24■■□□□ 1.47
SREBF1-204ENST00000395756 GPRASP1Q5JY77 1395 aa24.24■■□□□ 1.47
SREBF1-204ENST00000395756 TRPM1Q7Z4N2 1603 aa24.23■■□□□ 1.47
SREBF1-204ENST00000395756 ZNF518AQ6AHZ1 1483 aa24.23■■□□□ 1.47
SREBF1-204ENST00000395756 ZBED9Q6R2W3 1325 aa24.22■■□□□ 1.47
SREBF1-204ENST00000395756 PER1O15534 1290 aaPredicted RBP24.2■■□□□ 1.46
SREBF1-204ENST00000395756 MYBBP1AQ9BQG0 1328 aaKnown RBP24.2■■□□□ 1.46
SREBF1-204ENST00000395756 INO80Q9ULG1 1556 aaPredicted RBP24.19■■□□□ 1.46
SREBF1-204ENST00000395756 RALBP1Q15311 655 aa24.19■■□□□ 1.46
SREBF1-204ENST00000395756 PTPRTO14522 1441 aa24.19■■□□□ 1.46
SREBF1-204ENST00000395756 POLR1AO95602 1720 aaPredicted RBP24.19■■□□□ 1.46
SREBF1-204ENST00000395756 FAM69CQ0P6D2 419 aa24.18■■□□□ 1.46
SREBF1-204ENST00000395756 KTN1Q86UP2 1357 aaKnown RBP24.17■■□□□ 1.46
SREBF1-204ENST00000395756 POGZQ7Z3K3 1410 aa24.15■■□□□ 1.46
SREBF1-204ENST00000395756 TRPM2O94759 1503 aa24.15■■□□□ 1.46
SREBF1-204ENST00000395756 CLTCL1P53675 1640 aa24.15■■□□□ 1.46
SREBF1-204ENST00000395756 KIDINS220Q9ULH0 1771 aa24.13■■□□□ 1.45
SREBF1-204ENST00000395756 CFAP65Q6ZU64 1925 aaKnown RBP24.13■■□□□ 1.45
SREBF1-204ENST00000395756 TMEM132EQ6IEE7 984 aa24.13■■□□□ 1.45
SREBF1-204ENST00000395756 NLRP13Q86W25 1043 aa24.11■■□□□ 1.45
SREBF1-204ENST00000395756 TRAK1Q9UPV9 953 aa24.11■■□□□ 1.45
SREBF1-204ENST00000395756 TSHZ2Q9NRE2 1034 aa24.11■■□□□ 1.45
SREBF1-204ENST00000395756 KNSTRNQ9Y448 316 aa24.11■■□□□ 1.45
SREBF1-204ENST00000395756 PRDM15P57071 1507 aaPredicted RBP24.11■■□□□ 1.45
SREBF1-204ENST00000395756 COL17A1Q9UMD9 1497 aaPredicted RBP24.1■■□□□ 1.45
SREBF1-204ENST00000395756 TET3O43151 1660 aa24.08■■□□□ 1.45
SREBF1-204ENST00000395756 SPHKAPQ2M3C7 1700 aa24.07■■□□□ 1.44
SREBF1-204ENST00000395756 DEPDC5O75140 1603 aa24.07■■□□□ 1.44
SREBF1-204ENST00000395756 MROH1Q8NDA8 1641 aa24.07■■□□□ 1.44
SREBF1-204ENST00000395756 NPATQ14207 1427 aa24.06■■□□□ 1.44
SREBF1-204ENST00000395756 EIF2AK4Q9P2K8 1649 aaKnown RBP24.06■■□□□ 1.44
SREBF1-204ENST00000395756 BRD4O60885 1362 aaPredicted RBP24.06■■□□□ 1.44
SREBF1-204ENST00000395756 NOS1P29475 1434 aa24.05■■□□□ 1.44
SREBF1-204ENST00000395756 VWDEQ8N2E2 1590 aa24.04■■□□□ 1.44
SREBF1-204ENST00000395756 STAC3Q96MF2 364 aa24.04■■□□□ 1.44
SREBF1-204ENST00000395756 SCAF11Q99590 1463 aaKnown RBP24.04■■□□□ 1.44
SREBF1-204ENST00000395756 MLECQ14165 292 aa24.03■■□□□ 1.44
SREBF1-204ENST00000395756 PARD3Q8TEW0 1356 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms