RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 NOL8Q76FK4 1167 aaKnown RBP9.83□□□□□ -0.84
TRPS1-203ENST00000395715 TRIM6-TRIM34B2RNG4 842 aa9.82□□□□□ -0.84
TRPS1-203ENST00000395715 SKIDA1Q1XH10 827 aa9.82□□□□□ -0.84
TRPS1-203ENST00000395715 IFT57Q9NWB7 429 aa9.82□□□□□ -0.84
TRPS1-203ENST00000395715 ATP6V1DQ9Y5K8 247 aa9.82□□□□□ -0.84
TRPS1-203ENST00000395715 RGL3Q3MIN7 710 aa9.82□□□□□ -0.84
TRPS1-203ENST00000395715 CAGE1Q8TC20 777 aa9.82□□□□□ -0.84
TRPS1-203ENST00000395715 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.82□□□□□ -0.84
TRPS1-203ENST00000395715 DHX37Q8IY37 1157 aaKnown RBP9.81□□□□□ -0.84
TRPS1-203ENST00000395715 BCL11BQ9C0K0 894 aaPredicted RBP9.81□□□□□ -0.84
TRPS1-203ENST00000395715 CNKSR2Q8WXI2 1034 aa9.81□□□□□ -0.84
TRPS1-203ENST00000395715 HSP90AB2PQ58FF8 381 aa9.81□□□□□ -0.84
TRPS1-203ENST00000395715 CT47A1Q5JQC4 288 aaPredicted RBP9.81□□□□□ -0.84
TRPS1-203ENST00000395715 CCAR1Q8IX12 1150 aaKnown RBP9.81□□□□□ -0.84
TRPS1-203ENST00000395715 RSPH4AQ5TD94 716 aa9.81□□□□□ -0.84
TRPS1-203ENST00000395715 NF2P35240 595 aa9.81□□□□□ -0.84
TRPS1-203ENST00000395715 U2SURPO15042 1029 aaKnown RBP9.8□□□□□ -0.84
TRPS1-203ENST00000395715 AXDND1Q5T1B0 1012 aaPredicted RBP9.8□□□□□ -0.84
TRPS1-203ENST00000395715 RWDD1Q9H446 243 aaPredicted RBP9.8□□□□□ -0.84
TRPS1-203ENST00000395715 AEBP1Q8IUX7 1158 aa9.8□□□□□ -0.84
TRPS1-203ENST00000395715 POGKQ9P215 609 aa9.8□□□□□ -0.84
TRPS1-203ENST00000395715 SEPT11Q9NVA2 429 aaKnown RBP9.79□□□□□ -0.84
TRPS1-203ENST00000395715 RALBP1Q15311 655 aa9.79□□□□□ -0.84
TRPS1-203ENST00000395715 TMX4Q9H1E5 349 aaPredicted RBP9.79□□□□□ -0.84
TRPS1-203ENST00000395715 R3HCC1Q9Y3T6 440 aaKnown RBP9.79□□□□□ -0.84
TRPS1-203ENST00000395715 SOX12O15370 315 aa9.79□□□□□ -0.84
TRPS1-203ENST00000395715 IPO8O15397 1037 aaKnown RBP9.79□□□□□ -0.84
TRPS1-203ENST00000395715 CT47B1P0C2W7 299 aaPredicted RBP9.79□□□□□ -0.84
TRPS1-203ENST00000395715 ZNF526Q8TF50 670 aaPredicted RBP9.78□□□□□ -0.84
TRPS1-203ENST00000395715 HOOK1Q9UJC3 728 aaKnown RBP9.78□□□□□ -0.84
TRPS1-203ENST00000395715 ENOX2Q16206 610 aaKnown RBP9.78□□□□□ -0.84
TRPS1-203ENST00000395715 FAM184AQ8NB25 1140 aa9.78□□□□□ -0.84
TRPS1-203ENST00000395715 PMFBP1Q8TBY8 1022 aa9.78□□□□□ -0.84
TRPS1-203ENST00000395715 GORABQ5T7V8 394 aa9.77□□□□□ -0.84
TRPS1-203ENST00000395715 GOLGA6L10A6NI86 522 aa9.77□□□□□ -0.84
TRPS1-203ENST00000395715 FOXD4L6Q3SYB3 417 aaPredicted RBP9.77□□□□□ -0.85
TRPS1-203ENST00000395715 FOXD4L3Q6VB84 417 aaPredicted RBP9.77□□□□□ -0.85
TRPS1-203ENST00000395715 CENPHQ9H3R5 247 aa9.77□□□□□ -0.85
TRPS1-203ENST00000395715 SEPT7Q16181 437 aaKnown RBP9.77□□□□□ -0.85
TRPS1-203ENST00000395715 CC2D1BQ5T0F9 858 aaKnown RBP9.77□□□□□ -0.85
TRPS1-203ENST00000395715 ANKRD62A6NC57 917 aa9.76□□□□□ -0.85
TRPS1-203ENST00000395715 RBM25P49756 843 aaKnown RBP9.76□□□□□ -0.85
TRPS1-203ENST00000395715 SCRIBQ14160 1630 aa9.76□□□□□ -0.85
TRPS1-203ENST00000395715 ITPRIPQ8IWB1 547 aa9.76□□□□□ -0.85
TRPS1-203ENST00000395715 TCEAL9Q9UHQ7 104 aa9.76□□□□□ -0.85
TRPS1-203ENST00000395715 CCDC9Q9Y3X0 531 aaKnown RBP9.76□□□□□ -0.85
TRPS1-203ENST00000395715 ANKRD18AQ8IVF6 992 aa9.76□□□□□ -0.85
TRPS1-203ENST00000395715 CCDC47Q96A33 483 aaKnown RBP9.76□□□□□ -0.85
TRPS1-203ENST00000395715 MTUS2Q5JR59 1369 aa9.76□□□□□ -0.85
TRPS1-203ENST00000395715 GPATCH11Q8N954 259 aa9.76□□□□□ -0.85
TRPS1-203ENST00000395715 ZFYVE27Q5T4F4 411 aa9.75□□□□□ -0.85
TRPS1-203ENST00000395715 MLECQ14165 292 aa9.75□□□□□ -0.85
TRPS1-203ENST00000395715 RRP7BPQ9NSQ0 103 aa9.75□□□□□ -0.85
TRPS1-203ENST00000395715 G3V3G9 751 aa9.74□□□□□ -0.85
TRPS1-203ENST00000395715 DCAF8Q5TAQ9 597 aa9.74□□□□□ -0.85
TRPS1-203ENST00000395715 TICAM2Q86XR7 235 aa9.74□□□□□ -0.85
TRPS1-203ENST00000395715 EZRP15311 586 aaKnown RBP9.74□□□□□ -0.85
TRPS1-203ENST00000395715 CHMP4CQ96CF2 233 aa9.74□□□□□ -0.85
TRPS1-203ENST00000395715 ZNF330Q9Y3S2 320 aaPredicted RBP9.74□□□□□ -0.85
TRPS1-203ENST00000395715 AKAP17AQ02040 695 aaKnown RBP9.73□□□□□ -0.85
TRPS1-203ENST00000395715 DCAF1Q9Y4B6 1507 aa9.73□□□□□ -0.85
TRPS1-203ENST00000395715 TSHZ2Q9NRE2 1034 aa9.73□□□□□ -0.85
TRPS1-203ENST00000395715 MCTP1Q6DN14 999 aa9.73□□□□□ -0.85
TRPS1-203ENST00000395715 SASS6Q6UVJ0 657 aa9.73□□□□□ -0.85
TRPS1-203ENST00000395715 RTF1Q92541 710 aaKnown RBP9.73□□□□□ -0.85
TRPS1-203ENST00000395715 CCDC39Q9UFE4 941 aa9.73□□□□□ -0.85
TRPS1-203ENST00000395715 ERLIN2O94905 339 aa9.73□□□□□ -0.85
TRPS1-203ENST00000395715 RBM10P98175 930 aaKnown RBP9.72□□□□□ -0.85
TRPS1-203ENST00000395715 TOMM22Q9NS69 142 aa9.72□□□□□ -0.85
TRPS1-203ENST00000395715 EPS15P42566 896 aa9.72□□□□□ -0.85
TRPS1-203ENST00000395715 SPATA24Q86W54 205 aa9.72□□□□□ -0.85
TRPS1-203ENST00000395715 CARD11Q9BXL7 1154 aa9.72□□□□□ -0.85
TRPS1-203ENST00000395715 CHMP3Q9Y3E7 222 aa9.71□□□□□ -0.85
TRPS1-203ENST00000395715 GOLGA6L10A0A0M3HER8 536 aa9.71□□□□□ -0.85
TRPS1-203ENST00000395715 CLGNO14967 610 aa9.71□□□□□ -0.85
TRPS1-203ENST00000395715 ERICH4A6NGS2 130 aa9.71□□□□□ -0.86
TRPS1-203ENST00000395715 CEP63Q96MT8 703 aa9.71□□□□□ -0.86
TRPS1-203ENST00000395715 TTLL5Q6EMB2 1281 aa9.7□□□□□ -0.86
TRPS1-203ENST00000395715 EIF3JO75822 258 aaKnown RBP9.7□□□□□ -0.86
TRPS1-203ENST00000395715 RCAN3Q9UKA8 241 aa9.7□□□□□ -0.86
TRPS1-203ENST00000395715 BICD2Q8TD16 824 aa9.7□□□□□ -0.86
TRPS1-203ENST00000395715 CFAP57Q96MR6 1250 aa9.7□□□□□ -0.86
TRPS1-203ENST00000395715 PAK3O75914 559 aaPredicted RBP9.69□□□□□ -0.86
TRPS1-203ENST00000395715 TRIM29Q14134 588 aa9.69□□□□□ -0.86
TRPS1-203ENST00000395715 HMGN5P82970 282 aaKnown RBP9.69□□□□□ -0.86
TRPS1-203ENST00000395715 NAT10Q9H0A0 1025 aaKnown RBP9.69□□□□□ -0.86
TRPS1-203ENST00000395715 OFD1O75665 1012 aa9.69□□□□□ -0.86
TRPS1-203ENST00000395715 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.69□□□□□ -0.86
TRPS1-203ENST00000395715 PDILTQ8N807 584 aa9.69□□□□□ -0.86
TRPS1-203ENST00000395715 TNNT1P13805 278 aa9.69□□□□□ -0.86
TRPS1-203ENST00000395715 PPM1EQ8WY54 764 aa9.69□□□□□ -0.86
TRPS1-203ENST00000395715 CCP110O43303 1012 aa9.68□□□□□ -0.86
TRPS1-203ENST00000395715 IPO4Q8TEX9 1081 aaKnown RBP9.68□□□□□ -0.86
TRPS1-203ENST00000395715 PLEKHD1A6NEE1 506 aa9.68□□□□□ -0.86
TRPS1-203ENST00000395715 RRP9O43818 475 aaKnown RBP9.68□□□□□ -0.86
TRPS1-203ENST00000395715 TAX1BP1Q86VP1 789 aa9.68□□□□□ -0.86
TRPS1-203ENST00000395715 FBXW7Q969H0 707 aa9.68□□□□□ -0.86
TRPS1-203ENST00000395715 DDX11Q96FC9 970 aa9.68□□□□□ -0.86
TRPS1-203ENST00000395715 RABEP1Q15276 862 aa9.68□□□□□ -0.86
TRPS1-203ENST00000395715 NASPP49321 788 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms