RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 KIAA1328Q86T90 577 aa11.09□□□□□ -0.63
CHD2-201ENST00000394196 CCP110O43303 1012 aa11.09□□□□□ -0.63
CHD2-201ENST00000394196 KDM2AQ9Y2K7 1162 aa11.09□□□□□ -0.63
CHD2-201ENST00000394196 WDR66Q8TBY9 1149 aa11.09□□□□□ -0.63
CHD2-201ENST00000394196 CPSF2Q9P2I0 782 aaKnown RBP11.08□□□□□ -0.64
CHD2-201ENST00000394196 GBP2P32456 591 aaPredicted RBP11.08□□□□□ -0.64
CHD2-201ENST00000394196 HIRIP3Q9BW71 556 aaPredicted RBP11.08□□□□□ -0.64
CHD2-201ENST00000394196 GOLGA2Q08379 1002 aa11.08□□□□□ -0.64
CHD2-201ENST00000394196 FAM114A1Q8IWE2 563 aa11.08□□□□□ -0.64
CHD2-201ENST00000394196 SLKQ9H2G2 1235 aaPredicted RBP11.08□□□□□ -0.64
CHD2-201ENST00000394196 PAF1Q8N7H5 531 aa11.07□□□□□ -0.64
CHD2-201ENST00000394196 WWC1Q8IX03 1113 aa11.07□□□□□ -0.64
CHD2-201ENST00000394196 GPATCH3Q96I76 525 aa11.07□□□□□ -0.64
CHD2-201ENST00000394196 SEPT14Q6ZU15 432 aa11.07□□□□□ -0.64
CHD2-201ENST00000394196 RCAN3Q9UKA8 241 aa11.07□□□□□ -0.64
CHD2-201ENST00000394196 MYO6Q9UM54 1294 aa11.06□□□□□ -0.64
CHD2-201ENST00000394196 CLIP1P30622 1438 aa11.06□□□□□ -0.64
CHD2-201ENST00000394196 PDE3BQ13370 1112 aa11.06□□□□□ -0.64
CHD2-201ENST00000394196 PDCL3Q9H2J4 239 aa11.06□□□□□ -0.64
CHD2-201ENST00000394196 IPO7O95373 1038 aaKnown RBP11.05□□□□□ -0.64
CHD2-201ENST00000394196 SEPT6Q14141 434 aa11.05□□□□□ -0.64
CHD2-201ENST00000394196 ANO8Q9HCE9 1232 aaPredicted RBP11.05□□□□□ -0.64
CHD2-201ENST00000394196 RASSF8Q8NHQ8 419 aa11.05□□□□□ -0.64
CHD2-201ENST00000394196 CCDC39Q9UFE4 941 aa11.05□□□□□ -0.64
CHD2-201ENST00000394196 GOLGA3Q08378 1498 aa11.04□□□□□ -0.64
CHD2-201ENST00000394196 TDO2P48775 406 aa11.04□□□□□ -0.64
CHD2-201ENST00000394196 SPRYD3Q8NCJ5 442 aa11.04□□□□□ -0.64
CHD2-201ENST00000394196 P3H3Q8IVL6 736 aa11.04□□□□□ -0.64
CHD2-201ENST00000394196 CARD11Q9BXL7 1154 aa11.04□□□□□ -0.64
CHD2-201ENST00000394196 SARNPP82979 210 aaKnown RBP11.04□□□□□ -0.64
CHD2-201ENST00000394196 MIPOL1Q8TD10 442 aa11.04□□□□□ -0.64
CHD2-201ENST00000394196 TTLL5Q6EMB2 1281 aa11.04□□□□□ -0.64
CHD2-201ENST00000394196 DDX49Q9Y6V7 483 aaKnown RBP11.04□□□□□ -0.64
CHD2-201ENST00000394196 BECN2A8MW95 431 aa11.03□□□□□ -0.64
CHD2-201ENST00000394196 STK31Q9BXU1 1019 aa11.03□□□□□ -0.64
CHD2-201ENST00000394196 EIF3JO75822 258 aaKnown RBP11.03□□□□□ -0.64
CHD2-201ENST00000394196 RNF20Q5VTR2 975 aa11.03□□□□□ -0.64
CHD2-201ENST00000394196 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.02□□□□□ -0.65
CHD2-201ENST00000394196 ZNF622Q969S3 477 aaKnown RBP eCLIP11.02□□□□□ -0.659e-8■■□□□ 13.6
CHD2-201ENST00000394196 HOOK1Q9UJC3 728 aaKnown RBP11.02□□□□□ -0.65
CHD2-201ENST00000394196 RALBP1Q15311 655 aa11.02□□□□□ -0.65
CHD2-201ENST00000394196 FAM193AP78312 1265 aa11.01□□□□□ -0.65
CHD2-201ENST00000394196 ANKRD20A12PQ8NF67 263 aa11.01□□□□□ -0.65
CHD2-201ENST00000394196 CENPQQ7L2Z9 268 aaPredicted RBP11.01□□□□□ -0.65
CHD2-201ENST00000394196 RNF168Q8IYW5 571 aaPredicted RBP11.01□□□□□ -0.65
CHD2-201ENST00000394196 VGFO15240 615 aaPredicted RBP11.01□□□□□ -0.65
CHD2-201ENST00000394196 FAM161AQ3B820 660 aa11.01□□□□□ -0.65
CHD2-201ENST00000394196 CFAP57Q96MR6 1250 aa11.01□□□□□ -0.65
CHD2-201ENST00000394196 MRE11P49959 708 aa11.01□□□□□ -0.65
CHD2-201ENST00000394196 GOLGA6L9A6NEM1 432 aa11.01□□□□□ -0.65
CHD2-201ENST00000394196 GTF2A1P52655 376 aaPredicted RBP11□□□□□ -0.65
CHD2-201ENST00000394196 TMF1P82094 1093 aa11□□□□□ -0.65
CHD2-201ENST00000394196 TCHPQ9BT92 498 aa11□□□□□ -0.65
CHD2-201ENST00000394196 LETM1O95202 739 aaPredicted RBP11□□□□□ -0.65
CHD2-201ENST00000394196 SH3BGRP55822 239 aaPredicted RBP11□□□□□ -0.65
CHD2-201ENST00000394196 AEBP1Q8IUX7 1158 aa11□□□□□ -0.65
CHD2-201ENST00000394196 ZMYND15Q9H091 742 aa11□□□□□ -0.65
CHD2-201ENST00000394196 KTN1Q86UP2 1357 aaKnown RBP10.99□□□□□ -0.65
CHD2-201ENST00000394196 ENOX2Q16206 610 aaKnown RBP10.99□□□□□ -0.65
CHD2-201ENST00000394196 TPD52L1Q16890 204 aaPredicted RBP10.99□□□□□ -0.65
CHD2-201ENST00000394196 CCDC91Q7Z6B0 441 aa10.99□□□□□ -0.65
CHD2-201ENST00000394196 LUZP1Q86V48 1076 aa10.99□□□□□ -0.65
CHD2-201ENST00000394196 CCAR2Q8N163 923 aaKnown RBP10.99□□□□□ -0.65
CHD2-201ENST00000394196 DZIP1Q86YF9 867 aaKnown RBP10.98□□□□□ -0.65
CHD2-201ENST00000394196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.98□□□□□ -0.655e-7■■□□□ 13.6
CHD2-201ENST00000394196 SF3A1Q15459 793 aaKnown RBP10.98□□□□□ -0.65
CHD2-201ENST00000394196 TIGD1Q96MW7 591 aa10.98□□□□□ -0.65
CHD2-201ENST00000394196 FBLN2P98095 1184 aa10.98□□□□□ -0.65
CHD2-201ENST00000394196 HOMER1Q86YM7 354 aa10.97□□□□□ -0.65
CHD2-201ENST00000394196 CHIC2Q9UKJ5 165 aa10.97□□□□□ -0.65
CHD2-201ENST00000394196 LMOD3Q0VAK6 560 aa10.97□□□□□ -0.65
CHD2-201ENST00000394196 CHMP5Q9NZZ3 219 aa10.97□□□□□ -0.65
CHD2-201ENST00000394196 NUCB2P80303 420 aa10.97□□□□□ -0.65
CHD2-201ENST00000394196 NF2P35240 595 aa10.96□□□□□ -0.65
CHD2-201ENST00000394196 CLASRPQ8N2M8 674 aaKnown RBP10.96□□□□□ -0.65
CHD2-201ENST00000394196 CREBRFQ8IUR6 639 aa10.96□□□□□ -0.65
CHD2-201ENST00000394196 SHTN1A0MZ66 631 aa10.96□□□□□ -0.65
CHD2-201ENST00000394196 WDR78Q5VTH9 848 aa10.96□□□□□ -0.65
CHD2-201ENST00000394196 TRIM6-TRIM34B2RNG4 842 aa10.96□□□□□ -0.66
CHD2-201ENST00000394196 TRIM34Q9BYJ4 488 aa10.96□□□□□ -0.66
CHD2-201ENST00000394196 CT47A1Q5JQC4 288 aaPredicted RBP10.95□□□□□ -0.66
CHD2-201ENST00000394196 ERLIN1O75477 346 aa10.95□□□□□ -0.66
CHD2-201ENST00000394196 CEP162Q5TB80 1403 aa10.95□□□□□ -0.66
CHD2-201ENST00000394196 NAP1L1P55209 391 aaKnown RBP10.95□□□□□ -0.66
CHD2-201ENST00000394196 RABEP1Q15276 862 aa10.95□□□□□ -0.66
CHD2-201ENST00000394196 PAXIP1Q6ZW49 1069 aaPredicted RBP10.95□□□□□ -0.66
CHD2-201ENST00000394196 NPM1P06748 294 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHD2-201ENST00000394196 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
CHD2-201ENST00000394196 U2SURPO15042 1029 aaKnown RBP10.94□□□□□ -0.66
CHD2-201ENST00000394196 ROCK2O75116 1388 aaKnown RBP10.94□□□□□ -0.66
CHD2-201ENST00000394196 MICALCLQ6ZW33 695 aa10.94□□□□□ -0.66
CHD2-201ENST00000394196 CCDC173Q0VFZ6 552 aa10.94□□□□□ -0.66
CHD2-201ENST00000394196 GPATCH11Q8N954 259 aa10.94□□□□□ -0.66
CHD2-201ENST00000394196 NEUROD2Q15784 382 aa10.94□□□□□ -0.66
CHD2-201ENST00000394196 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHD2-201ENST00000394196 NAT10Q9H0A0 1025 aaKnown RBP10.94□□□□□ -0.66
CHD2-201ENST00000394196 SEPT11Q9NVA2 429 aaKnown RBP10.94□□□□□ -0.66
CHD2-201ENST00000394196 GOLIM4O00461 696 aa10.93□□□□□ -0.66
CHD2-201ENST00000394196 CCDC175P0C221 793 aa10.93□□□□□ -0.66
CHD2-201ENST00000394196 ZBTB17Q13105 803 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms