RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 SSUH2Q9Y2M2 353 aa4.97□□□□□ -1.61
XRN1-202ENST00000392981 NUTM2BA6NNL0 878 aaPredicted RBP4.97□□□□□ -1.61
XRN1-202ENST00000392981 NUTM2EB1AL46 878 aaPredicted RBP4.97□□□□□ -1.61
XRN1-202ENST00000392981 MAP3K9P80192 1104 aa4.97□□□□□ -1.61
XRN1-202ENST00000392981 NUTM2DQ5VT03 806 aaPredicted RBP4.97□□□□□ -1.61
XRN1-202ENST00000392981 NUTM2AQ8IVF1 878 aaPredicted RBP4.97□□□□□ -1.61
XRN1-202ENST00000392981 GIPC2Q8TF65 315 aa4.97□□□□□ -1.61
XRN1-202ENST00000392981 IRF6O14896 467 aa4.96□□□□□ -1.62
XRN1-202ENST00000392981 GNPATO15228 680 aa4.96□□□□□ -1.62
XRN1-202ENST00000392981 AP1G2O75843 785 aa4.96□□□□□ -1.62
XRN1-202ENST00000392981 PBXIP1Q96AQ6 731 aa4.96□□□□□ -1.62
XRN1-202ENST00000392981 DRC1Q96MC2 740 aa4.96□□□□□ -1.62
XRN1-202ENST00000392981 TSR1Q2NL82 804 aaKnown RBP4.96□□□□□ -1.62
XRN1-202ENST00000392981 VRTNQ9H8Y1 702 aa4.96□□□□□ -1.62
XRN1-202ENST00000392981 SNRKQ9NRH2 765 aa4.96□□□□□ -1.62
XRN1-202ENST00000392981 IRX6P78412 446 aaPredicted RBP4.95□□□□□ -1.62
XRN1-202ENST00000392981 HDGFL1Q5TGJ6 251 aa4.95□□□□□ -1.62
XRN1-202ENST00000392981 SND1Q7KZF4 910 aaKnown RBP eCLIP4.95□□□□□ -1.62
XRN1-202ENST00000392981 TAF7LQ5H9L4 462 aa4.95□□□□□ -1.62
XRN1-202ENST00000392981 DDX12PQ92771 950 aa4.95□□□□□ -1.62
XRN1-202ENST00000392981 CERS3Q8IU89 383 aa4.95□□□□□ -1.62
XRN1-202ENST00000392981 B4GALNT3Q6L9W6 998 aa4.94□□□□□ -1.62
XRN1-202ENST00000392981 FCHSD2O94868 740 aa4.94□□□□□ -1.62
XRN1-202ENST00000392981 POM121CA8CG34 1229 aa4.94□□□□□ -1.62
XRN1-202ENST00000392981 PPP1R15BQ5SWA1 713 aa4.93□□□□□ -1.62
XRN1-202ENST00000392981 SPDYE1Q8NFV5 336 aaPredicted RBP4.93□□□□□ -1.62
XRN1-202ENST00000392981 CLSTN1O94985 981 aa4.93□□□□□ -1.62
XRN1-202ENST00000392981 ZNF326Q5BKZ1 582 aaKnown RBP4.93□□□□□ -1.62
XRN1-202ENST00000392981 MS4A1P11836 297 aa4.93□□□□□ -1.62
XRN1-202ENST00000392981 TSNAXIP1Q2TAA8 658 aa4.93□□□□□ -1.62
XRN1-202ENST00000392981 SPDYE5A6NIY4 337 aa4.93□□□□□ -1.62
XRN1-202ENST00000392981 G3V3G9 751 aa4.93□□□□□ -1.62
XRN1-202ENST00000392981 SGIP1Q9BQI5 828 aa4.93□□□□□ -1.62
XRN1-202ENST00000392981 NLRP7Q8WX94 980 aa4.92□□□□□ -1.62
XRN1-202ENST00000392981 CLCN1P35523 988 aa4.92□□□□□ -1.62
XRN1-202ENST00000392981 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.92□□□□□ -1.62
XRN1-202ENST00000392981 SSTR3P32745 418 aaPredicted RBP4.92□□□□□ -1.62
XRN1-202ENST00000392981 AMOTL2Q9Y2J4 779 aa4.92□□□□□ -1.62
XRN1-202ENST00000392981 NCKAP5LQ9HCH0 1330 aa4.92□□□□□ -1.62
XRN1-202ENST00000392981 TCF3P15923 654 aa4.91□□□□□ -1.62
XRN1-202ENST00000392981 ABL1P00519 1130 aa4.91□□□□□ -1.62
XRN1-202ENST00000392981 CLK2P49760 499 aaKnown RBP4.91□□□□□ -1.62
XRN1-202ENST00000392981 SH3D19Q5HYK7 790 aa4.91□□□□□ -1.62
XRN1-202ENST00000392981 SREK1Q8WXA9 508 aaKnown RBP4.91□□□□□ -1.62
XRN1-202ENST00000392981 HIC1Q14526 733 aa4.91□□□□□ -1.62
XRN1-202ENST00000392981 SKIV2LQ15477 1246 aaKnown RBP4.91□□□□□ -1.62
XRN1-202ENST00000392981 DNAJC2Q99543 621 aaKnown RBP4.91□□□□□ -1.62
XRN1-202ENST00000392981 TBC1D2BQ9UPU7 963 aa4.91□□□□□ -1.62
XRN1-202ENST00000392981 PAK3O75914 559 aaPredicted RBP4.91□□□□□ -1.62
XRN1-202ENST00000392981 CHRM1P11229 460 aaPredicted RBP4.91□□□□□ -1.62
XRN1-202ENST00000392981 FECHP22830 423 aa4.91□□□□□ -1.62
XRN1-202ENST00000392981 CANXP27824 592 aaKnown RBP4.91□□□□□ -1.62
XRN1-202ENST00000392981 TMC2Q8TDI7 906 aa4.91□□□□□ -1.62
XRN1-202ENST00000392981 IBSPP21815 317 aaPredicted RBP4.91□□□□□ -1.62
XRN1-202ENST00000392981 PTMSP20962 102 aa4.9□□□□□ -1.62
XRN1-202ENST00000392981 PMFBP1Q8TBY8 1022 aa4.9□□□□□ -1.62
XRN1-202ENST00000392981 GORABQ5T7V8 394 aa4.9□□□□□ -1.62
XRN1-202ENST00000392981 USTQ9Y2C2 406 aa4.9□□□□□ -1.62
XRN1-202ENST00000392981 MARCH6O60337 910 aa4.9□□□□□ -1.63
XRN1-202ENST00000392981 CCDC125Q86Z20 511 aa4.89□□□□□ -1.63
XRN1-202ENST00000392981 UNCXA6NJT0 531 aa4.89□□□□□ -1.63
XRN1-202ENST00000392981 C9orf131Q5VYM1 1079 aa4.89□□□□□ -1.63
XRN1-202ENST00000392981 GTF2F1P35269 517 aaKnown RBP eCLIP4.89□□□□□ -1.63
XRN1-202ENST00000392981 RFC5P40937 340 aa4.89□□□□□ -1.63
XRN1-202ENST00000392981 AMHR2Q16671 573 aa4.89□□□□□ -1.63
XRN1-202ENST00000392981 ERCC5P28715 1186 aaPredicted RBP4.88□□□□□ -1.63
XRN1-202ENST00000392981 TMC1Q8TDI8 760 aa4.88□□□□□ -1.63
XRN1-202ENST00000392981 TANGO6Q9C0B7 1094 aa4.88□□□□□ -1.63
XRN1-202ENST00000392981 GPCPD1Q9NPB8 672 aa4.88□□□□□ -1.63
XRN1-202ENST00000392981 ONECUT3O60422 494 aaPredicted RBP4.88□□□□□ -1.63
XRN1-202ENST00000392981 MARSP56192 900 aaKnown RBP4.88□□□□□ -1.63
XRN1-202ENST00000392981 SF3A1Q15459 793 aaKnown RBP4.88□□□□□ -1.63
XRN1-202ENST00000392981 RBM33Q96EV2 1170 aaKnown RBP4.88□□□□□ -1.63
XRN1-202ENST00000392981 ANAPC15P60006 121 aa4.88□□□□□ -1.63
XRN1-202ENST00000392981 VAC14Q08AM6 782 aa4.88□□□□□ -1.63
XRN1-202ENST00000392981 NUTM1Q86Y26 1132 aa4.88□□□□□ -1.63
XRN1-202ENST00000392981 SPDYE16A6NNV3 312 aaPredicted RBP4.88□□□□□ -1.63
XRN1-202ENST00000392981 CCDC136Q96JN2 1154 aa4.87□□□□□ -1.63
XRN1-202ENST00000392981 MYH16Q9H6N6 1097 aa4.87□□□□□ -1.63
XRN1-202ENST00000392981 GOPCQ9HD26 462 aa4.87□□□□□ -1.63
XRN1-202ENST00000392981 IQSEC3Q9UPP2 1182 aaPredicted RBP4.87□□□□□ -1.63
XRN1-202ENST00000392981 BRPF3Q9ULD4 1205 aa4.87□□□□□ -1.63
XRN1-202ENST00000392981 SEMA3FQ13275 785 aa4.87□□□□□ -1.63
XRN1-202ENST00000392981 SPATA32Q96LK8 384 aa4.87□□□□□ -1.63
XRN1-202ENST00000392981 TMEM259Q4ZIN3 620 aa4.87□□□□□ -1.63
XRN1-202ENST00000392981 NAALADL2Q58DX5 795 aa4.87□□□□□ -1.63
XRN1-202ENST00000392981 MAP3K7O43318 606 aa4.86□□□□□ -1.63
XRN1-202ENST00000392981 hCG_2014768A0A024R1R8 64 aa4.86□□□□□ -1.63
XRN1-202ENST00000392981 TMA7Q9Y2S6 64 aaKnown RBP4.86□□□□□ -1.63
XRN1-202ENST00000392981 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.86□□□□□ -1.63
XRN1-202ENST00000392981 FAM161AQ3B820 660 aa4.85□□□□□ -1.63
XRN1-202ENST00000392981 FNBP4Q8N3X1 1017 aaPredicted RBP4.85□□□□□ -1.63
XRN1-202ENST00000392981 BCCIPQ9P287 314 aaKnown RBP eCLIP4.85□□□□□ -1.63
XRN1-202ENST00000392981 AAMPQ13685 434 aa4.85□□□□□ -1.63
XRN1-202ENST00000392981 UBXN4Q92575 508 aa4.85□□□□□ -1.63
XRN1-202ENST00000392981 HIRIP3Q9BW71 556 aaPredicted RBP4.85□□□□□ -1.63
XRN1-202ENST00000392981 TICAM2Q86XR7 235 aa4.85□□□□□ -1.63
XRN1-202ENST00000392981 MRS2Q9HD23 443 aa4.85□□□□□ -1.63
XRN1-202ENST00000392981 RBM19Q9Y4C8 960 aaKnown RBP4.85□□□□□ -1.63
XRN1-202ENST00000392981 TBC1D12O60347 775 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms