RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 FAM135AQ9P2D6 1515 aa20.4■□□□□ 0.86
SHTN1-204ENST00000392903 ZCCHC11Q5TAX3 1644 aaKnown RBP20.4■□□□□ 0.86
SHTN1-204ENST00000392903 CARD11Q9BXL7 1154 aa20.39■□□□□ 0.86
SHTN1-204ENST00000392903 ARHGEF12Q9NZN5 1544 aa20.38■□□□□ 0.85
SHTN1-204ENST00000392903 RGL3Q3MIN7 710 aa20.38■□□□□ 0.85
SHTN1-204ENST00000392903 EFCAB2Q5VUJ9 269 aa20.37■□□□□ 0.85
SHTN1-204ENST00000392903 FAM9BQ8IZU0 186 aa20.36■□□□□ 0.85
SHTN1-204ENST00000392903 B4GALNT3Q6L9W6 998 aa20.36■□□□□ 0.85
SHTN1-204ENST00000392903 PLEKHH2Q8IVE3 1493 aa20.36■□□□□ 0.85
SHTN1-204ENST00000392903 BCORL1Q5H9F3 1711 aa20.36■□□□□ 0.85
SHTN1-204ENST00000392903 PLCH2O75038 1416 aa20.36■□□□□ 0.85
SHTN1-204ENST00000392903 MRS2Q9HD23 443 aa20.35■□□□□ 0.85
SHTN1-204ENST00000392903 POLR1AO95602 1720 aaPredicted RBP20.34■□□□□ 0.85
SHTN1-204ENST00000392903 ZBED9Q6R2W3 1325 aa20.34■□□□□ 0.85
SHTN1-204ENST00000392903 UHRF1BP1Q6BDS2 1440 aa20.34■□□□□ 0.85
SHTN1-204ENST00000392903 KDM5CP41229 1560 aa20.32■□□□□ 0.84
SHTN1-204ENST00000392903 CCDC144AA2RUR9 1427 aa20.32■□□□□ 0.84
SHTN1-204ENST00000392903 MAST1Q9Y2H9 1570 aa20.32■□□□□ 0.84
SHTN1-204ENST00000392903 ST20-MTHFSA0A0A6YYL1 179 aa20.32■□□□□ 0.84
SHTN1-204ENST00000392903 UHRF1BP1LA0JNW5 1464 aa20.32■□□□□ 0.84
SHTN1-204ENST00000392903 PAK3O75914 559 aaPredicted RBP20.31■□□□□ 0.84
SHTN1-204ENST00000392903 RALGAPBQ86X10 1494 aa20.31■□□□□ 0.84
SHTN1-204ENST00000392903 AFAP1Q8N556 730 aa20.31■□□□□ 0.84
SHTN1-204ENST00000392903 TRAPPC8Q9Y2L5 1435 aa20.3■□□□□ 0.84
SHTN1-204ENST00000392903 NBR1Q14596 966 aa20.29■□□□□ 0.84
SHTN1-204ENST00000392903 PLA2R1Q13018 1463 aa20.28■□□□□ 0.84
SHTN1-204ENST00000392903 ROCK2O75116 1388 aaKnown RBP20.27■□□□□ 0.84
SHTN1-204ENST00000392903 UNC13BO14795 1591 aa20.27■□□□□ 0.84
SHTN1-204ENST00000392903 PLXNC1O60486 1568 aa20.27■□□□□ 0.84
SHTN1-204ENST00000392903 DUOX2Q9NRD8 1548 aa20.26■□□□□ 0.83
SHTN1-204ENST00000392903 NBPF1Q3BBV0 1214 aa20.25■□□□□ 0.83
SHTN1-204ENST00000392903 DHX29Q7Z478 1369 aaKnown RBP20.25■□□□□ 0.83
SHTN1-204ENST00000392903 SPAG9O60271 1321 aaKnown RBP20.24■□□□□ 0.83
SHTN1-204ENST00000392903 ABCC1P33527 1531 aa20.23■□□□□ 0.83
SHTN1-204ENST00000392903 IPO9Q96P70 1041 aaKnown RBP20.23■□□□□ 0.83
SHTN1-204ENST00000392903 ARID4BQ4LE39 1312 aaPredicted RBP20.21■□□□□ 0.83
SHTN1-204ENST00000392903 IQGAP3Q86VI3 1631 aa20.21■□□□□ 0.83
SHTN1-204ENST00000392903 ERBINQ96RT1 1412 aa20.21■□□□□ 0.83
SHTN1-204ENST00000392903 ANP32AP39687 249 aaKnown RBP20.21■□□□□ 0.83
SHTN1-204ENST00000392903 PRAG1Q86YV5 1406 aa20.2■□□□□ 0.82
SHTN1-204ENST00000392903 RTL5Q5HYW3 569 aaPredicted RBP20.18■□□□□ 0.82
SHTN1-204ENST00000392903 A2MP01023 1474 aa20.18■□□□□ 0.82
SHTN1-204ENST00000392903 SMG6Q86US8 1419 aaKnown RBP20.18■□□□□ 0.82
SHTN1-204ENST00000392903 WDR7Q9Y4E6 1490 aa20.17■□□□□ 0.82
SHTN1-204ENST00000392903 ANO8Q9HCE9 1232 aaPredicted RBP20.17■□□□□ 0.82
SHTN1-204ENST00000392903 RNF123Q5XPI4 1314 aa20.16■□□□□ 0.82
SHTN1-204ENST00000392903 SENP3-EIF4A1A0A087X0R7 540 aa20.15■□□□□ 0.82
SHTN1-204ENST00000392903 TRPM1Q7Z4N2 1603 aa20.14■□□□□ 0.82
SHTN1-204ENST00000392903 FANCAO15360 1455 aa20.14■□□□□ 0.82
SHTN1-204ENST00000392903 MAGI2Q86UL8 1455 aa20.14■□□□□ 0.82
SHTN1-204ENST00000392903 ZBTB47Q9UFB7 747 aaPredicted RBP20.14■□□□□ 0.82
SHTN1-204ENST00000392903 ZFYVE16Q7Z3T8 1539 aa20.11■□□□□ 0.81
SHTN1-204ENST00000392903 KIF3BO15066 747 aa20.1■□□□□ 0.81
SHTN1-204ENST00000392903 RTEL1-TNFRSF6BF6WH68 1400 aa20.1■□□□□ 0.81
SHTN1-204ENST00000392903 ASXL2Q76L83 1435 aa20.1■□□□□ 0.81
SHTN1-204ENST00000392903 SCAPERQ9BY12 1400 aa20.1■□□□□ 0.81
SHTN1-204ENST00000392903 CCDC136Q96JN2 1154 aa20.1■□□□□ 0.81
SHTN1-204ENST00000392903 TMC1Q8TDI8 760 aa20.09■□□□□ 0.81
SHTN1-204ENST00000392903 ATP10AO60312 1499 aa20.09■□□□□ 0.81
SHTN1-204ENST00000392903 ARAP3Q8WWN8 1544 aa20.08■□□□□ 0.81
SHTN1-204ENST00000392903 OSCARQ8IYS5 282 aa20.08■□□□□ 0.8
SHTN1-204ENST00000392903 ADGRL1O94910 1474 aa20.07■□□□□ 0.8
SHTN1-204ENST00000392903 NUDCQ9Y266 331 aa20.07■□□□□ 0.8
SHTN1-204ENST00000392903 E9PCH4 1651 aa20.07■□□□□ 0.8
SHTN1-204ENST00000392903 SALL2Q9Y467 1007 aaPredicted RBP20.06■□□□□ 0.8
SHTN1-204ENST00000392903 ABCA9Q8IUA7 1624 aa20.05■□□□□ 0.8
SHTN1-204ENST00000392903 NPM1P06748 294 aaKnown RBP eCLIP20.05■□□□□ 0.8
SHTN1-204ENST00000392903 GPRASP1Q5JY77 1395 aa20.05■□□□□ 0.8
SHTN1-204ENST00000392903 ATP7AQ04656 1500 aa20.04■□□□□ 0.8
SHTN1-204ENST00000392903 PNISRQ8TF01 805 aaKnown RBP20.04■□□□□ 0.8
SHTN1-204ENST00000392903 TESK2Q96S53 571 aa20.04■□□□□ 0.8
SHTN1-204ENST00000392903 DISP3Q9P2K9 1392 aa20.03■□□□□ 0.8
SHTN1-204ENST00000392903 IL27Q8NEV9 243 aa20.01■□□□□ 0.79
SHTN1-204ENST00000392903 USP35Q9P2H5 1018 aa20.01■□□□□ 0.79
SHTN1-204ENST00000392903 KANK1Q14678 1352 aa20■□□□□ 0.79
SHTN1-204ENST00000392903 PRDM15P57071 1507 aaPredicted RBP20■□□□□ 0.79
SHTN1-204ENST00000392903 RALBP1Q15311 655 aa20■□□□□ 0.79
SHTN1-204ENST00000392903 MYBBP1AQ9BQG0 1328 aaKnown RBP19.99■□□□□ 0.79
SHTN1-204ENST00000392903 INO80Q9ULG1 1556 aaPredicted RBP19.99■□□□□ 0.79
SHTN1-204ENST00000392903 EIF2AK4Q9P2K8 1649 aaKnown RBP19.98■□□□□ 0.79
SHTN1-204ENST00000392903 PER1O15534 1290 aaPredicted RBP19.98■□□□□ 0.79
SHTN1-204ENST00000392903 TMF1P82094 1093 aa19.97■□□□□ 0.79
SHTN1-204ENST00000392903 CC2D1BQ5T0F9 858 aaKnown RBP19.97■□□□□ 0.79
SHTN1-204ENST00000392903 PANK3Q9H999 370 aa19.97■□□□□ 0.79
SHTN1-204ENST00000392903 SPHKAPQ2M3C7 1700 aa19.96■□□□□ 0.79
SHTN1-204ENST00000392903 DEPDC5O75140 1603 aa19.96■□□□□ 0.79
SHTN1-204ENST00000392903 TRPM2O94759 1503 aa19.96■□□□□ 0.79
SHTN1-204ENST00000392903 PTPRTO14522 1441 aa19.96■□□□□ 0.79
SHTN1-204ENST00000392903 CLTCL1P53675 1640 aa19.95■□□□□ 0.78
SHTN1-204ENST00000392903 COL17A1Q9UMD9 1497 aaPredicted RBP19.95■□□□□ 0.78
SHTN1-204ENST00000392903 LAMC1P11047 1609 aa19.95■□□□□ 0.78
SHTN1-204ENST00000392903 KTN1Q86UP2 1357 aaKnown RBP19.95■□□□□ 0.78
SHTN1-204ENST00000392903 BRD4O60885 1362 aaPredicted RBP19.94■□□□□ 0.78
SHTN1-204ENST00000392903 TET3O43151 1660 aa19.93■□□□□ 0.78
SHTN1-204ENST00000392903 WASHC2CQ9Y4E1 1318 aa19.92■□□□□ 0.78
SHTN1-204ENST00000392903 CEP152O94986 1710 aa19.92■□□□□ 0.78
SHTN1-204ENST00000392903 MADDQ8WXG6 1647 aa19.91■□□□□ 0.78
SHTN1-204ENST00000392903 UGGT1Q9NYU2 1555 aa19.91■□□□□ 0.78
SHTN1-204ENST00000392903 CD109Q6YHK3 1445 aa19.91■□□□□ 0.78
SHTN1-204ENST00000392903 KIDINS220Q9ULH0 1771 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms