RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 USP35Q9P2H5 1018 aa10.04□□□□□ -0.8
TRAV35-201ENST00000390462 KCNA1Q09470 495 aa10.03□□□□□ -0.8
TRAV35-201ENST00000390462 PPP1R15BQ5SWA1 713 aa10.02□□□□□ -0.81
TRAV35-201ENST00000390462 OXER1Q8TDS5 423 aa10.02□□□□□ -0.81
TRAV35-201ENST00000390462 BMP2KQ9NSY1 1161 aaPredicted RBP10.02□□□□□ -0.81
TRAV35-201ENST00000390462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.02□□□□□ -0.81
TRAV35-201ENST00000390462 SKIV2LQ15477 1246 aaKnown RBP10.01□□□□□ -0.81
TRAV35-201ENST00000390462 SPDYE5A6NIY4 337 aa10□□□□□ -0.81
TRAV35-201ENST00000390462 BRD1O95696 1058 aa10□□□□□ -0.81
TRAV35-201ENST00000390462 HIC1Q14526 733 aa9.99□□□□□ -0.81
TRAV35-201ENST00000390462 EMILIN3Q9NT22 766 aa9.99□□□□□ -0.81
TRAV35-201ENST00000390462 TRIM35Q9UPQ4 493 aa9.99□□□□□ -0.81
TRAV35-201ENST00000390462 FECHP22830 423 aa9.97□□□□□ -0.81
TRAV35-201ENST00000390462 RSPH4AQ5TD94 716 aa9.97□□□□□ -0.81
TRAV35-201ENST00000390462 GPHNQ9NQX3 736 aaPredicted RBP9.97□□□□□ -0.81
TRAV35-201ENST00000390462 GALR2O43603 387 aaPredicted RBP9.96□□□□□ -0.82
TRAV35-201ENST00000390462 FCHSD2O94868 740 aa9.96□□□□□ -0.82
TRAV35-201ENST00000390462 CCDC27Q2M243 656 aa9.96□□□□□ -0.82
TRAV35-201ENST00000390462 REPIN1Q9BWE0 567 aaKnown RBP9.96□□□□□ -0.82
TRAV35-201ENST00000390462 PROCA1Q8NCQ7 364 aaPredicted RBP9.95□□□□□ -0.82
TRAV35-201ENST00000390462 ATP1B4Q9UN42 357 aaPredicted RBP9.95□□□□□ -0.82
TRAV35-201ENST00000390462 GRXCR2A6NFK2 248 aa9.94□□□□□ -0.82
TRAV35-201ENST00000390462 DPY19L2Q6NUT2 758 aa9.93□□□□□ -0.82
TRAV35-201ENST00000390462 BANK1Q8NDB2 785 aa9.93□□□□□ -0.82
TRAV35-201ENST00000390462 CALR3Q96L12 384 aaKnown RBP9.93□□□□□ -0.82
TRAV35-201ENST00000390462 MICALL2Q8IY33 904 aa9.92□□□□□ -0.82
TRAV35-201ENST00000390462 USTQ9Y2C2 406 aa9.92□□□□□ -0.82
TRAV35-201ENST00000390462 CLCN6P51797 869 aa9.91□□□□□ -0.82
TRAV35-201ENST00000390462 SNRKQ9NRH2 765 aa9.91□□□□□ -0.82
TRAV35-201ENST00000390462 MYT1LQ9UL68 1186 aa9.91□□□□□ -0.82
TRAV35-201ENST00000390462 DSG2Q14126 1118 aa9.9□□□□□ -0.82
TRAV35-201ENST00000390462 PDCD7Q8N8D1 485 aaKnown RBP9.9□□□□□ -0.82
TRAV35-201ENST00000390462 WWC1Q8IX03 1113 aa9.89□□□□□ -0.83
TRAV35-201ENST00000390462 TMUB1Q9BVT8 246 aa9.89□□□□□ -0.83
TRAV35-201ENST00000390462 OSBPP22059 807 aa9.88□□□□□ -0.83
TRAV35-201ENST00000390462 TMC2Q8TDI7 906 aa9.88□□□□□ -0.83
TRAV35-201ENST00000390462 PBXIP1Q96AQ6 731 aa9.88□□□□□ -0.83
TRAV35-201ENST00000390462 POLR3EQ9NVU0 708 aa9.88□□□□□ -0.83
TRAV35-201ENST00000390462 CSB-PGBD3P0DP91 1061 aa9.87□□□□□ -0.83
TRAV35-201ENST00000390462 CLCN1P35523 988 aa9.87□□□□□ -0.83
TRAV35-201ENST00000390462 ATN1P54259 1190 aaPredicted RBP9.87□□□□□ -0.83
TRAV35-201ENST00000390462 FOXK1P85037 733 aa9.87□□□□□ -0.83
TRAV35-201ENST00000390462 SND1Q7KZF4 910 aaKnown RBP eCLIP9.87□□□□□ -0.83
TRAV35-201ENST00000390462 HAX1O00165 279 aa9.86□□□□□ -0.83
TRAV35-201ENST00000390462 IRX5P78411 483 aaPredicted RBP9.86□□□□□ -0.83
TRAV35-201ENST00000390462 FAM177A1Q8N128 213 aaPredicted RBP9.86□□□□□ -0.83
TRAV35-201ENST00000390462 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRAV35-201ENST00000390462 IVNS1ABPQ9Y6Y0 642 aa9.86□□□□□ -0.83
TRAV35-201ENST00000390462 GLMNQ92990 594 aa9.85□□□□□ -0.83
TRAV35-201ENST00000390462 TMEM121BQ9BXQ6 578 aaPredicted RBP9.85□□□□□ -0.83
TRAV35-201ENST00000390462 ABCC9O60706 1549 aa9.84□□□□□ -0.83
TRAV35-201ENST00000390462 ATMINO43313 823 aaPredicted RBP9.84□□□□□ -0.83
TRAV35-201ENST00000390462 SSTR3P32745 418 aaPredicted RBP9.84□□□□□ -0.83
TRAV35-201ENST00000390462 IER5LQ5T953 404 aa9.84□□□□□ -0.83
TRAV35-201ENST00000390462 CHMP4AQ9BY43 222 aa9.84□□□□□ -0.83
TRAV35-201ENST00000390462 OCEL1Q9H607 264 aa9.84□□□□□ -0.83
TRAV35-201ENST00000390462 GDPD2Q9HCC8 539 aa9.84□□□□□ -0.83
TRAV35-201ENST00000390462 GPCPD1Q9NPB8 672 aa9.84□□□□□ -0.83
TRAV35-201ENST00000390462 UNCXA6NJT0 531 aa9.83□□□□□ -0.84
TRAV35-201ENST00000390462 RFC5P40937 340 aa9.83□□□□□ -0.84
TRAV35-201ENST00000390462 EVX2Q03828 476 aa9.83□□□□□ -0.84
TRAV35-201ENST00000390462 ASTLQ6HA08 431 aaPredicted RBP9.83□□□□□ -0.84
TRAV35-201ENST00000390462 BEGAINQ9BUH8 593 aa9.83□□□□□ -0.84
TRAV35-201ENST00000390462 IGSF5Q9NSI5 407 aa9.83□□□□□ -0.84
TRAV35-201ENST00000390462 BOLA1Q9Y3E2 137 aa9.83□□□□□ -0.84
TRAV35-201ENST00000390462 TBC1D12O60347 775 aa9.82□□□□□ -0.84
TRAV35-201ENST00000390462 C2orf72A6NCS6 295 aa9.81□□□□□ -0.84
TRAV35-201ENST00000390462 POM121CA8CG34 1229 aa9.81□□□□□ -0.84
TRAV35-201ENST00000390462 KIF3CO14782 793 aa9.81□□□□□ -0.84
TRAV35-201ENST00000390462 TMEM259Q4ZIN3 620 aa9.81□□□□□ -0.84
TRAV35-201ENST00000390462 PLPP6Q8IY26 295 aa9.81□□□□□ -0.84
TRAV35-201ENST00000390462 G3V3G9 751 aa9.8□□□□□ -0.84
TRAV35-201ENST00000390462 MDM2Q00987 491 aaPredicted RBP9.8□□□□□ -0.84
TRAV35-201ENST00000390462 PTGDRQ13258 359 aa9.8□□□□□ -0.84
TRAV35-201ENST00000390462 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.79□□□□□ -0.84
TRAV35-201ENST00000390462 MYSM1Q5VVJ2 828 aa9.79□□□□□ -0.84
TRAV35-201ENST00000390462 ABL2P42684 1182 aa9.78□□□□□ -0.84
TRAV35-201ENST00000390462 CLK2P49760 499 aaKnown RBP9.78□□□□□ -0.84
TRAV35-201ENST00000390462 RBM47A0AV96 593 aaKnown RBP9.77□□□□□ -0.85
TRAV35-201ENST00000390462 PLCG2P16885 1265 aa9.77□□□□□ -0.85
TRAV35-201ENST00000390462 RFX1P22670 979 aa9.77□□□□□ -0.85
TRAV35-201ENST00000390462 SRPK2P78362 688 aaKnown RBP9.77□□□□□ -0.85
TRAV35-201ENST00000390462 MAP3K9P80192 1104 aa9.77□□□□□ -0.85
TRAV35-201ENST00000390462 MTMR14Q8NCE2 650 aa9.77□□□□□ -0.85
TRAV35-201ENST00000390462 CARNS1A5YM72 827 aa9.76□□□□□ -0.85
TRAV35-201ENST00000390462 PRM3Q9NNZ6 103 aa9.76□□□□□ -0.85
TRAV35-201ENST00000390462 PTGER2P43116 358 aa9.75□□□□□ -0.85
TRAV35-201ENST00000390462 VRTNQ9H8Y1 702 aa9.75□□□□□ -0.85
TRAV35-201ENST00000390462 CCDC125Q86Z20 511 aa9.74□□□□□ -0.85
TRAV35-201ENST00000390462 L3MBTL3Q96JM7 780 aaPredicted RBP9.74□□□□□ -0.85
TRAV35-201ENST00000390462 CFAP70Q5T0N1 1121 aa9.73□□□□□ -0.85
TRAV35-201ENST00000390462 PPP2R2DQ66LE6 453 aa9.73□□□□□ -0.85
TRAV35-201ENST00000390462 FAM217BQ9NTX9 383 aaPredicted RBP9.73□□□□□ -0.85
TRAV35-201ENST00000390462 HDGFL1Q5TGJ6 251 aa9.72□□□□□ -0.85
TRAV35-201ENST00000390462 FBXO31Q5XUX0 539 aaPredicted RBP9.72□□□□□ -0.85
TRAV35-201ENST00000390462 DDX12PQ92771 950 aa9.72□□□□□ -0.85
TRAV35-201ENST00000390462 PHOX2BQ99453 314 aa9.72□□□□□ -0.85
TRAV35-201ENST00000390462 SOCS7O14512 581 aa9.71□□□□□ -0.86
TRAV35-201ENST00000390462 PRIM1P49642 420 aaKnown RBP9.71□□□□□ -0.86
TRAV35-201ENST00000390462 TMEM92Q6UXU6 159 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms