RNA–Protein interactions for RNA: ENST00000383897.1

RNU1-39P-201, Transcript of RNA, U1 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU1-39P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-39P-201ENST00000383897 EPAS1Q99814 870 aa8.53□□□□□ -1.04
RNU1-39P-201ENST00000383897 PLSCR2Q9NRY7 297 aa8.53□□□□□ -1.04
RNU1-39P-201ENST00000383897 MAP3K7O43318 606 aa8.52□□□□□ -1.05
RNU1-39P-201ENST00000383897 FBXW7Q969H0 707 aa8.52□□□□□ -1.05
RNU1-39P-201ENST00000383897 PRIM1P49642 420 aaKnown RBP8.51□□□□□ -1.05
RNU1-39P-201ENST00000383897 TSR1Q2NL82 804 aaKnown RBP8.5□□□□□ -1.05
RNU1-39P-201ENST00000383897 OSBPP22059 807 aa8.49□□□□□ -1.05
RNU1-39P-201ENST00000383897 EN1Q05925 392 aaPredicted RBP8.49□□□□□ -1.05
RNU1-39P-201ENST00000383897 SPNS2Q8IVW8 549 aa8.49□□□□□ -1.05
RNU1-39P-201ENST00000383897 COL9A1P20849 921 aa8.48□□□□□ -1.05
RNU1-39P-201ENST00000383897 C6orf132Q5T0Z8 1188 aa8.48□□□□□ -1.05
RNU1-39P-201ENST00000383897 ADGRD1Q6QNK2 874 aa8.47□□□□□ -1.05
RNU1-39P-201ENST00000383897 PPP1R3GB7ZBB8 358 aa8.46□□□□□ -1.06
RNU1-39P-201ENST00000383897 CDHR5Q9HBB8 845 aa8.46□□□□□ -1.06
RNU1-39P-201ENST00000383897 SLC24A1O60721 1099 aa8.45□□□□□ -1.06
RNU1-39P-201ENST00000383897 PROX2Q3B8N5 592 aa8.45□□□□□ -1.06
RNU1-39P-201ENST00000383897 ZBED2Q9BTP6 218 aa8.44□□□□□ -1.06
RNU1-39P-201ENST00000383897 VPS9D1Q9Y2B5 631 aa8.44□□□□□ -1.06
RNU1-39P-201ENST00000383897 TESPA1A2RU30 521 aaPredicted RBP8.43□□□□□ -1.06
RNU1-39P-201ENST00000383897 MMRN1Q13201 1228 aa8.43□□□□□ -1.06
RNU1-39P-201ENST00000383897 TK2O00142 265 aa8.41□□□□□ -1.06
RNU1-39P-201ENST00000383897 RBM26Q5T8P6 1007 aaKnown RBP8.4□□□□□ -1.06
RNU1-39P-201ENST00000383897 MYT1LQ9UL68 1186 aa8.4□□□□□ -1.06
RNU1-39P-201ENST00000383897 NUTM2FA1L443 756 aa8.39□□□□□ -1.07
RNU1-39P-201ENST00000383897 HRO43593 1189 aa8.39□□□□□ -1.07
RNU1-39P-201ENST00000383897 STAC3Q96MF2 364 aa8.39□□□□□ -1.07
RNU1-39P-201ENST00000383897 SLC4A5Q9BY07 1137 aa8.38□□□□□ -1.07
RNU1-39P-201ENST00000383897 TRIM6-TRIM34B2RNG4 842 aa8.37□□□□□ -1.07
RNU1-39P-201ENST00000383897 SMYD5Q6GMV2 418 aa8.37□□□□□ -1.07
RNU1-39P-201ENST00000383897 RNF166Q96A37 237 aaPredicted RBP8.37□□□□□ -1.07
RNU1-39P-201ENST00000383897 KIAA1468Q9P260 1216 aa8.37□□□□□ -1.07
RNU1-39P-201ENST00000383897 CDCA7LQ96GN5 454 aa8.36□□□□□ -1.07
RNU1-39P-201ENST00000383897 TSKSQ9UJT2 592 aa8.36□□□□□ -1.07
RNU1-39P-201ENST00000383897 PRSS12P56730 875 aa8.35□□□□□ -1.07
RNU1-39P-201ENST00000383897 NPDC1Q9NQX5 325 aaPredicted RBP8.35□□□□□ -1.07
RNU1-39P-201ENST00000383897 SEPT9Q9UHD8 586 aaPredicted RBP8.35□□□□□ -1.07
RNU1-39P-201ENST00000383897 BHMG1C9JSJ3 638 aaPredicted RBP8.34□□□□□ -1.07
RNU1-39P-201ENST00000383897 PADI6Q6TGC4 694 aa8.34□□□□□ -1.07
RNU1-39P-201ENST00000383897 MRPL50Q8N5N7 158 aaKnown RBP8.34□□□□□ -1.07
RNU1-39P-201ENST00000383897 CERKQ8TCT0 537 aa8.34□□□□□ -1.07
RNU1-39P-201ENST00000383897 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
RNU1-39P-201ENST00000383897 FAM198AQ9UFP1 575 aa8.34□□□□□ -1.07
RNU1-39P-201ENST00000383897 RABGEF1Q9UJ41 708 aa8.34□□□□□ -1.07
RNU1-39P-201ENST00000383897 SMAPO00193 183 aa8.33□□□□□ -1.08
RNU1-39P-201ENST00000383897 GOLGA8CPA6NN73 597 aa8.32□□□□□ -1.08
RNU1-39P-201ENST00000383897 TULP1O00294 542 aaPredicted RBP8.32□□□□□ -1.08
RNU1-39P-201ENST00000383897 PTGDRQ13258 359 aa8.32□□□□□ -1.08
RNU1-39P-201ENST00000383897 KCTD12Q96CX2 325 aaKnown RBP8.32□□□□□ -1.08
RNU1-39P-201ENST00000383897 C3orf80F5H4A9 247 aa8.31□□□□□ -1.08
RNU1-39P-201ENST00000383897 PACS2Q86VP3 889 aa8.31□□□□□ -1.08
RNU1-39P-201ENST00000383897 FCHSD2O94868 740 aa8.3□□□□□ -1.08
RNU1-39P-201ENST00000383897 GPIHBP1Q8IV16 184 aa8.3□□□□□ -1.08
RNU1-39P-201ENST00000383897 PNMA3Q9UL41 463 aa8.3□□□□□ -1.08
RNU1-39P-201ENST00000383897 ONECUT3O60422 494 aaPredicted RBP8.29□□□□□ -1.08
RNU1-39P-201ENST00000383897 NUDT18Q6ZVK8 323 aa8.29□□□□□ -1.08
RNU1-39P-201ENST00000383897 NBPF26B4DH59 902 aa8.28□□□□□ -1.08
RNU1-39P-201ENST00000383897 FAM161AQ3B820 660 aa8.28□□□□□ -1.08
RNU1-39P-201ENST00000383897 WNT2BQ93097 391 aa8.28□□□□□ -1.08
RNU1-39P-201ENST00000383897 RBM27Q9P2N5 1060 aaKnown RBP8.28□□□□□ -1.08
RNU1-39P-201ENST00000383897 TATDN2Q93075 761 aa8.27□□□□□ -1.09
RNU1-39P-201ENST00000383897 GPR37O15354 613 aa8.26□□□□□ -1.09
RNU1-39P-201ENST00000383897 FAM98CQ17RN3 349 aaKnown RBP8.26□□□□□ -1.09
RNU1-39P-201ENST00000383897 TTC13Q8NBP0 860 aa8.26□□□□□ -1.09
RNU1-39P-201ENST00000383897 ZFRQ96KR1 1074 aaKnown RBP8.26□□□□□ -1.09
RNU1-39P-201ENST00000383897 FECHP22830 423 aa8.25□□□□□ -1.09
RNU1-39P-201ENST00000383897 BCAMP50895 628 aa8.25□□□□□ -1.09
RNU1-39P-201ENST00000383897 PTPN5P54829 565 aa8.25□□□□□ -1.09
RNU1-39P-201ENST00000383897 LMOD2Q6P5Q4 547 aa8.25□□□□□ -1.09
RNU1-39P-201ENST00000383897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.25□□□□□ -1.09
RNU1-39P-201ENST00000383897 LAPTM4BQ86VI4 370 aa8.25□□□□□ -1.09
RNU1-39P-201ENST00000383897 HIC1Q14526 733 aa8.24□□□□□ -1.09
RNU1-39P-201ENST00000383897 ANKK1Q8NFD2 765 aa8.24□□□□□ -1.09
RNU1-39P-201ENST00000383897 GNPATO15228 680 aa8.23□□□□□ -1.09
RNU1-39P-201ENST00000383897 THSD4Q6ZMP0 1018 aa8.23□□□□□ -1.09
RNU1-39P-201ENST00000383897 RNF40O75150 1001 aa8.21□□□□□ -1.1
RNU1-39P-201ENST00000383897 SAMD7Q7Z3H4 446 aa8.21□□□□□ -1.1
RNU1-39P-201ENST00000383897 ADGRG1Q9Y653 693 aa8.21□□□□□ -1.1
RNU1-39P-201ENST00000383897 LRCH3Q96II8 777 aa8.2□□□□□ -1.1
RNU1-39P-201ENST00000383897 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.2□□□□□ -1.1
RNU1-39P-201ENST00000383897 HCSTQ9UBK5 93 aa8.2□□□□□ -1.1
RNU1-39P-201ENST00000383897 SOWAHBA6NEL2 793 aa8.19□□□□□ -1.1
RNU1-39P-201ENST00000383897 RBM46Q8TBY0 533 aaKnown RBP8.19□□□□□ -1.1
RNU1-39P-201ENST00000383897 EYA1Q99502 592 aa8.19□□□□□ -1.1
RNU1-39P-201ENST00000383897 BCANQ96GW7 911 aa8.18□□□□□ -1.1
RNU1-39P-201ENST00000383897 SWT1Q5T5J6 900 aaKnown RBP8.17□□□□□ -1.1
RNU1-39P-201ENST00000383897 HPS5Q9UPZ3 1129 aa8.17□□□□□ -1.1
RNU1-39P-201ENST00000383897 RCCD1A6NED2 376 aa8.16□□□□□ -1.1
RNU1-39P-201ENST00000383897 NLRP7Q8WX94 980 aa8.16□□□□□ -1.1
RNU1-39P-201ENST00000383897 WBP1LQ9NX94 342 aa8.16□□□□□ -1.1
RNU1-39P-201ENST00000383897 DNAJB2P25686 324 aa8.15□□□□□ -1.1
RNU1-39P-201ENST00000383897 HDGFP51858 240 aaKnown RBP8.15□□□□□ -1.1
RNU1-39P-201ENST00000383897 METTL3Q86U44 580 aaKnown RBP8.15□□□□□ -1.1
RNU1-39P-201ENST00000383897 PXYLP1Q8TE99 480 aa8.15□□□□□ -1.1
RNU1-39P-201ENST00000383897 OATP04181 439 aa8.14□□□□□ -1.11
RNU1-39P-201ENST00000383897 ZC3H15Q8WU90 426 aaKnown RBP8.14□□□□□ -1.11
RNU1-39P-201ENST00000383897 MAP2K5Q13163 448 aa8.13□□□□□ -1.11
RNU1-39P-201ENST00000383897 TSR3Q9UJK0 312 aaKnown RBP8.13□□□□□ -1.11
RNU1-39P-201ENST00000383897 PPP4CP60510 307 aa8.12□□□□□ -1.11
RNU1-39P-201ENST00000383897 PHOX2BQ99453 314 aa8.12□□□□□ -1.11
RNU1-39P-201ENST00000383897 TMEM134Q9H6X4 195 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms