RNA–Protein interactions for RNA: ENST00000380913.7

SHROOM2-201, Transcript of shroom family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM2, Length 7,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-201ENST00000380913 CTDP1Q9Y5B0 961 aaPredicted RBP18.81■□□□□ 0.6
SHROOM2-201ENST00000380913 AKAP17AQ02040 695 aaKnown RBP18.8■□□□□ 0.6
SHROOM2-201ENST00000380913 CLIP1P30622 1438 aa18.8■□□□□ 0.6
SHROOM2-201ENST00000380913 NAP1L1P55209 391 aaKnown RBP18.79■□□□□ 0.6
SHROOM2-201ENST00000380913 TPM1P09493 284 aa18.79■□□□□ 0.6
SHROOM2-201ENST00000380913 SPAG9O60271 1321 aaKnown RBP18.79■□□□□ 0.6
SHROOM2-201ENST00000380913 GGT6Q6P531 493 aa18.78■□□□□ 0.6
SHROOM2-201ENST00000380913 DHX16O60231 1041 aaKnown RBP18.78■□□□□ 0.6
SHROOM2-201ENST00000380913 PLCD4Q9BRC7 762 aa18.78■□□□□ 0.6
SHROOM2-201ENST00000380913 NUTM2DQ5VT03 806 aaPredicted RBP18.77■□□□□ 0.6
SHROOM2-201ENST00000380913 GPS2Q13227 327 aa18.77■□□□□ 0.6
SHROOM2-201ENST00000380913 KLHL34Q8N239 644 aa18.77■□□□□ 0.59
SHROOM2-201ENST00000380913 TRIM34Q9BYJ4 488 aa18.77■□□□□ 0.59
SHROOM2-201ENST00000380913 FOXD1Q16676 465 aa18.76■□□□□ 0.59
SHROOM2-201ENST00000380913 HOMER1Q86YM7 354 aa18.76■□□□□ 0.59
SHROOM2-201ENST00000380913 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
SHROOM2-201ENST00000380913 ST18O60284 1047 aa18.75■□□□□ 0.59
SHROOM2-201ENST00000380913 FAM13BQ9NYF5 915 aa18.75■□□□□ 0.59
SHROOM2-201ENST00000380913 ZFYVE27Q5T4F4 411 aa18.75■□□□□ 0.59
SHROOM2-201ENST00000380913 DCAF1Q9Y4B6 1507 aa18.75■□□□□ 0.59
SHROOM2-201ENST00000380913 TCERG1O14776 1098 aaKnown RBP18.75■□□□□ 0.59
SHROOM2-201ENST00000380913 DDX49Q9Y6V7 483 aaKnown RBP18.74■□□□□ 0.59
SHROOM2-201ENST00000380913 CWC22Q9HCG8 908 aaKnown RBP18.74■□□□□ 0.59
SHROOM2-201ENST00000380913 PMFBP1Q8TBY8 1022 aa18.74■□□□□ 0.59
SHROOM2-201ENST00000380913 KDM4AO75164 1064 aa18.74■□□□□ 0.59
SHROOM2-201ENST00000380913 MAP7D2Q96T17 732 aa18.73■□□□□ 0.59
SHROOM2-201ENST00000380913 HMMRO75330 724 aa18.72■□□□□ 0.59
SHROOM2-201ENST00000380913 CT47A1Q5JQC4 288 aaPredicted RBP18.72■□□□□ 0.59
SHROOM2-201ENST00000380913 ELL2O00472 640 aaPredicted RBP18.71■□□□□ 0.59
SHROOM2-201ENST00000380913 APPP05067 770 aa18.7■□□□□ 0.58
SHROOM2-201ENST00000380913 HDGFP51858 240 aaKnown RBP18.7■□□□□ 0.58
SHROOM2-201ENST00000380913 ODF2Q5BJF6 829 aa18.7■□□□□ 0.58
SHROOM2-201ENST00000380913 TTLL5Q6EMB2 1281 aa18.7■□□□□ 0.58
SHROOM2-201ENST00000380913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.7■□□□□ 0.58
SHROOM2-201ENST00000380913 RUFY1Q96T51 708 aa18.7■□□□□ 0.58
SHROOM2-201ENST00000380913 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
SHROOM2-201ENST00000380913 KTN1Q86UP2 1357 aaKnown RBP18.69■□□□□ 0.58
SHROOM2-201ENST00000380913 RRP7AQ9Y3A4 280 aaKnown RBP18.69■□□□□ 0.58
SHROOM2-201ENST00000380913 IPO7O95373 1038 aaKnown RBP18.69■□□□□ 0.58
SHROOM2-201ENST00000380913 BCL2L13Q9BXK5 485 aa18.68■□□□□ 0.58
SHROOM2-201ENST00000380913 MTMR7Q9Y216 660 aa18.68■□□□□ 0.58
SHROOM2-201ENST00000380913 CCDC43Q96MW1 224 aaKnown RBP18.68■□□□□ 0.58
SHROOM2-201ENST00000380913 KIF3AQ9Y496 699 aa18.68■□□□□ 0.58
SHROOM2-201ENST00000380913 SYNE3Q6ZMZ3 975 aa18.67■□□□□ 0.58
SHROOM2-201ENST00000380913 NECTIN2Q92692 538 aa18.67■□□□□ 0.58
SHROOM2-201ENST00000380913 IPO9Q96P70 1041 aaKnown RBP18.67■□□□□ 0.58
SHROOM2-201ENST00000380913 HSPA5P11021 654 aaKnown RBP18.67■□□□□ 0.58
SHROOM2-201ENST00000380913 PAF1Q8N7H5 531 aa18.67■□□□□ 0.58
SHROOM2-201ENST00000380913 KANK1Q14678 1352 aa18.66■□□□□ 0.58
SHROOM2-201ENST00000380913 TEX35Q5T0J7 233 aa18.66■□□□□ 0.58
SHROOM2-201ENST00000380913 ANKRD45Q5TZF3 282 aa18.66■□□□□ 0.58
SHROOM2-201ENST00000380913 AMPHP49418 695 aa18.66■□□□□ 0.58
SHROOM2-201ENST00000380913 HSP90AB2PQ58FF8 381 aa18.66■□□□□ 0.58
SHROOM2-201ENST00000380913 TRIM29Q14134 588 aa18.65■□□□□ 0.58
SHROOM2-201ENST00000380913 NGDNQ8NEJ9 315 aaKnown RBP18.63■□□□□ 0.57
SHROOM2-201ENST00000380913 FYB1O15117 783 aa18.63■□□□□ 0.57
SHROOM2-201ENST00000380913 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.62■□□□□ 0.57
SHROOM2-201ENST00000380913 BICD2Q8TD16 824 aa18.62■□□□□ 0.57
SHROOM2-201ENST00000380913 NOL10Q9BSC4 688 aaKnown RBP18.62■□□□□ 0.57
SHROOM2-201ENST00000380913 DDX11L8A8MPP1 907 aa18.62■□□□□ 0.57
SHROOM2-201ENST00000380913 ANO2Q9NQ90 1003 aa18.61■□□□□ 0.57
SHROOM2-201ENST00000380913 SYTL4Q96C24 671 aaPredicted RBP18.61■□□□□ 0.57
SHROOM2-201ENST00000380913 AK7Q96M32 723 aa18.61■□□□□ 0.57
SHROOM2-201ENST00000380913 NFXL1Q6ZNB6 911 aa18.6■□□□□ 0.57
SHROOM2-201ENST00000380913 VPS37DQ86XT2 251 aa18.6■□□□□ 0.57
SHROOM2-201ENST00000380913 AMOTL1Q8IY63 956 aa18.6■□□□□ 0.57
SHROOM2-201ENST00000380913 ANKRD20A12PQ8NF67 263 aa18.59■□□□□ 0.57
SHROOM2-201ENST00000380913 EIF2S2P20042 333 aaKnown RBP18.58■□□□□ 0.57
SHROOM2-201ENST00000380913 CCDC47Q96A33 483 aaKnown RBP18.58■□□□□ 0.56
SHROOM2-201ENST00000380913 PDILTQ8N807 584 aa18.58■□□□□ 0.56
SHROOM2-201ENST00000380913 ROCK2O75116 1388 aaKnown RBP18.58■□□□□ 0.56
SHROOM2-201ENST00000380913 PLIN1O60240 522 aa18.58■□□□□ 0.56
SHROOM2-201ENST00000380913 CENPJQ9HC77 1338 aaPredicted RBP18.57■□□□□ 0.56
SHROOM2-201ENST00000380913 H0YHG0 523 aa18.57■□□□□ 0.56
SHROOM2-201ENST00000380913 RSPH6AQ9H0K4 717 aa18.57■□□□□ 0.56
SHROOM2-201ENST00000380913 IFT57Q9NWB7 429 aa18.57■□□□□ 0.56
SHROOM2-201ENST00000380913 EPS15P42566 896 aa18.57■□□□□ 0.56
SHROOM2-201ENST00000380913 CPLX1O14810 134 aa18.57■□□□□ 0.56
SHROOM2-201ENST00000380913 EVA1CP58658 441 aa18.57■□□□□ 0.56
SHROOM2-201ENST00000380913 DIAPH3Q9NSV4 1193 aa18.57■□□□□ 0.56
SHROOM2-201ENST00000380913 HSP90AB3PQ58FF7 597 aa18.56■□□□□ 0.56
SHROOM2-201ENST00000380913 CAGE1Q8TC20 777 aa18.56■□□□□ 0.56
SHROOM2-201ENST00000380913 VPS37CA5D8V6 355 aaPredicted RBP18.55■□□□□ 0.56
SHROOM2-201ENST00000380913 TMEM132AQ24JP5 1023 aa18.55■□□□□ 0.56
SHROOM2-201ENST00000380913 R3HCC1Q9Y3T6 440 aaKnown RBP18.55■□□□□ 0.56
SHROOM2-201ENST00000380913 MNS1Q8NEH6 495 aa18.54■□□□□ 0.56
SHROOM2-201ENST00000380913 CCDC191Q8NCU4 936 aa18.54■□□□□ 0.56
SHROOM2-201ENST00000380913 ANKRD62A6NC57 917 aa18.53■□□□□ 0.56
SHROOM2-201ENST00000380913 HDAC5Q9UQL6 1122 aa18.52■□□□□ 0.56
SHROOM2-201ENST00000380913 NEFHP12036 1026 aa18.51■□□□□ 0.55
SHROOM2-201ENST00000380913 TSHZ2Q9NRE2 1034 aa18.51■□□□□ 0.55
SHROOM2-201ENST00000380913 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
SHROOM2-201ENST00000380913 ATP6V1DQ9Y5K8 247 aa18.51■□□□□ 0.55
SHROOM2-201ENST00000380913 OFD1O75665 1012 aa18.51■□□□□ 0.55
SHROOM2-201ENST00000380913 CDR1P51861 262 aa18.51■□□□□ 0.55
SHROOM2-201ENST00000380913 NOM1Q5C9Z4 860 aaKnown RBP18.51■□□□□ 0.55
SHROOM2-201ENST00000380913 CPLX2Q6PUV4 134 aaKnown RBP18.51■□□□□ 0.55
SHROOM2-201ENST00000380913 CEP162Q5TB80 1403 aa18.5■□□□□ 0.55
SHROOM2-201ENST00000380913 PKD2Q13563 968 aa18.5■□□□□ 0.55
SHROOM2-201ENST00000380913 SASS6Q6UVJ0 657 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms