RNA–Protein interactions for RNA: ENST00000378402.9

PKHD1L1-201, Transcript of PKHD1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKHD1L1, Length 13,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-201ENST00000378402 RSPH4AQ5TD94 716 aa4.26□□□□□ -1.73
PKHD1L1-201ENST00000378402 HSP90AB3PQ58FF7 597 aa4.26□□□□□ -1.73
PKHD1L1-201ENST00000378402 CCP110O43303 1012 aa4.25□□□□□ -1.73
PKHD1L1-201ENST00000378402 EIF3JO75822 258 aaKnown RBP4.25□□□□□ -1.73
PKHD1L1-201ENST00000378402 TAOK2Q9UL54 1235 aa4.25□□□□□ -1.73
PKHD1L1-201ENST00000378402 TPM4P67936 248 aa4.25□□□□□ -1.73
PKHD1L1-201ENST00000378402 ATP6V1DQ9Y5K8 247 aa4.25□□□□□ -1.73
PKHD1L1-201ENST00000378402 ZRSR1Q15695 479 aaKnown RBP4.25□□□□□ -1.73
PKHD1L1-201ENST00000378402 DDX11Q96FC9 970 aa4.25□□□□□ -1.73
PKHD1L1-201ENST00000378402 RSF1Q96T23 1441 aaPredicted RBP4.25□□□□□ -1.73
PKHD1L1-201ENST00000378402 GABPB1Q06547 395 aaPredicted RBP4.25□□□□□ -1.73
PKHD1L1-201ENST00000378402 TONSLQ96HA7 1378 aa4.24□□□□□ -1.73
PKHD1L1-201ENST00000378402 ANKRD18BA2A2Z9 1011 aa4.24□□□□□ -1.73
PKHD1L1-201ENST00000378402 RDXP35241 583 aaKnown RBP4.24□□□□□ -1.73
PKHD1L1-201ENST00000378402 NUCB2P80303 420 aa4.24□□□□□ -1.73
PKHD1L1-201ENST00000378402 RTN4Q9NQC3 1192 aaKnown RBP4.24□□□□□ -1.73
PKHD1L1-201ENST00000378402 NPHP1O15259 732 aa4.24□□□□□ -1.73
PKHD1L1-201ENST00000378402 CAVIN2O95810 425 aa4.24□□□□□ -1.73
PKHD1L1-201ENST00000378402 GBP2P32456 591 aaPredicted RBP4.24□□□□□ -1.73
PKHD1L1-201ENST00000378402 EFCC1Q9HA90 598 aa4.24□□□□□ -1.73
PKHD1L1-201ENST00000378402 FAM50AQ14320 339 aaKnown RBP4.24□□□□□ -1.73
PKHD1L1-201ENST00000378402 IVLP07476 585 aa4.24□□□□□ -1.73
PKHD1L1-201ENST00000378402 CIZ1Q9ULV3 898 aaPredicted RBP4.24□□□□□ -1.73
PKHD1L1-201ENST00000378402 INSRP06213 1382 aa4.24□□□□□ -1.73
PKHD1L1-201ENST00000378402 JAKMIP3Q5VZ66 844 aa4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 AK7Q96M32 723 aa4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 CENPHQ9H3R5 247 aa4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 RBM25P49756 843 aaKnown RBP4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 PAXIP1Q6ZW49 1069 aaPredicted RBP4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 ERCC4Q92889 916 aaPredicted RBP4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 HMGB3O15347 200 aaKnown RBP4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 GOLGA6L9A6NEM1 432 aa4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 ZMYM4Q5VZL5 1548 aa4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 HDAC1Q13547 482 aaPredicted RBP4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 HMMRO75330 724 aa4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 WASHC2AQ641Q2 1341 aa4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 HNRNPUQ00839 825 aaKnown RBP eCLIP4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 MIPOL1Q8TD10 442 aa4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 INCENPQ9NQS7 918 aa4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 TIGD1Q96MW7 591 aa4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 UTP14AQ9BVJ6 771 aaKnown RBP4.23□□□□□ -1.73
PKHD1L1-201ENST00000378402 SF3B2Q13435 895 aaKnown RBP4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 CCDC91Q7Z6B0 441 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 ERCC3P19447 782 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 TMED1Q13445 227 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 MTUS2Q5JR59 1369 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 ZSCAN30Q86W11 494 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 CCDC39Q9UFE4 941 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 IBTKQ9P2D0 1353 aaPredicted RBP4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 HSP90AB1P08238 724 aaKnown RBP4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 NBPF1Q3BBV0 1214 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 SUDS3Q9H7L9 328 aaPredicted RBP4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 BSDC1Q9NW68 430 aaPredicted RBP4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 ROCK1Q13464 1354 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 LMNB2Q03252 620 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 GOLGA6L19H0YKK7 550 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 SLMAPQ14BN4 828 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 PDILTQ8N807 584 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 SLKQ9H2G2 1235 aaPredicted RBP4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 CCDC18Q5T9S5 1454 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 SETDB1Q15047 1291 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 STK11IPQ8N1F8 1099 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 MRVI1Q9Y6F6 885 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 CEP162Q5TB80 1403 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 KIAA1328Q86T90 577 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 WDR78Q5VTH9 848 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 MIER1Q8N108 512 aa4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 SLC4A1APQ9BWU0 796 aaKnown RBP4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 ZRANB2O95218 330 aaKnown RBP eCLIP4.22□□□□□ -1.73
PKHD1L1-201ENST00000378402 MPHOSPH10O00566 681 aaKnown RBP4.21□□□□□ -1.73
PKHD1L1-201ENST00000378402 CCDC38Q502W7 563 aa4.21□□□□□ -1.73
PKHD1L1-201ENST00000378402 PIK3R5Q8WYR1 880 aa4.21□□□□□ -1.73
PKHD1L1-201ENST00000378402 TRIM6-TRIM34B2RNG4 842 aa4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 KIF3CO14782 793 aa4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 TRIM34Q9BYJ4 488 aa4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 BMS1Q14692 1282 aaKnown RBP4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 CENPQQ7L2Z9 268 aaPredicted RBP4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 FEZ2Q9UHY8 353 aaPredicted RBP4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 TERF2IPQ9NYB0 399 aa4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 SWAP70Q9UH65 585 aa4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 TMCO5BA8MYB1 307 aa4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 CDR1P51861 262 aa4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 CCDC34Q96HJ3 373 aa4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 POLA1P09884 1462 aaPredicted RBP4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 MCM3P25205 808 aa4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 ESPNB1AK53 854 aa4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 APLFQ8IW19 511 aaPredicted RBP4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 RMDN2Q96LZ7 410 aa4.21□□□□□ -1.74
PKHD1L1-201ENST00000378402 SPATS2Q86XZ4 545 aaKnown RBP4.2□□□□□ -1.74
PKHD1L1-201ENST00000378402 CNKSR2Q8WXI2 1034 aa4.2□□□□□ -1.74
PKHD1L1-201ENST00000378402 CDCA8Q53HL2 280 aa4.2□□□□□ -1.74
PKHD1L1-201ENST00000378402 UBTFP17480 764 aaKnown RBP4.2□□□□□ -1.74
PKHD1L1-201ENST00000378402 FAM210AQ96ND0 272 aa4.2□□□□□ -1.74
PKHD1L1-201ENST00000378402 TTLL5Q6EMB2 1281 aa4.2□□□□□ -1.74
PKHD1L1-201ENST00000378402 GOLGA6L10A0A0M3HER8 536 aa4.2□□□□□ -1.74
PKHD1L1-201ENST00000378402 GOLGA6L7A0A1B0GV03 622 aa4.2□□□□□ -1.74
PKHD1L1-201ENST00000378402 MBD3O95983 291 aa4.2□□□□□ -1.74
PKHD1L1-201ENST00000378402 KAT6BQ8WYB5 2073 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms