RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 HIRIP3Q9BW71 556 aaPredicted RBP13.92□□□□□ -0.18
USP11-203ENST00000377080 PZPP20742 1482 aa13.91□□□□□ -0.18
USP11-203ENST00000377080 CAMSAP2Q08AD1 1489 aa13.91□□□□□ -0.18
USP11-203ENST00000377080 CFAP74Q9C0B2 1584 aa13.91□□□□□ -0.18
USP11-203ENST00000377080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.9□□□□□ -0.18
USP11-203ENST00000377080 PLEKHD1A6NEE1 506 aa13.9□□□□□ -0.18
USP11-203ENST00000377080 MBD5Q9P267 1494 aa13.9□□□□□ -0.18
USP11-203ENST00000377080 ZMYM4Q5VZL5 1548 aa13.9□□□□□ -0.19
USP11-203ENST00000377080 KIAA1107Q9UPP5 1409 aa13.9□□□□□ -0.19
USP11-203ENST00000377080 ANKRD30AQ9BXX3 1397 aa13.89□□□□□ -0.19
USP11-203ENST00000377080 KDM5DQ9BY66 1539 aa13.89□□□□□ -0.19
USP11-203ENST00000377080 CFDP1Q9UEE9 299 aaPredicted RBP13.88□□□□□ -0.19
USP11-203ENST00000377080 SLC4A1APQ9BWU0 796 aaKnown RBP13.87□□□□□ -0.19
USP11-203ENST00000377080 UHRF1BP1Q6BDS2 1440 aa13.87□□□□□ -0.19
USP11-203ENST00000377080 PRKRIP1Q9H875 184 aaPredicted RBP13.86□□□□□ -0.19
USP11-203ENST00000377080 ARHGEF5Q12774 1597 aa13.86□□□□□ -0.19
USP11-203ENST00000377080 IQSEC2Q5JU85 1478 aa13.86□□□□□ -0.19
USP11-203ENST00000377080 LTBP4Q8N2S1 1624 aa13.86□□□□□ -0.19
USP11-203ENST00000377080 ARHGEF12Q9NZN5 1544 aa13.85□□□□□ -0.19
USP11-203ENST00000377080 RSPH4AQ5TD94 716 aa13.85□□□□□ -0.19
USP11-203ENST00000377080 MAGI2Q86UL8 1455 aa13.85□□□□□ -0.19
USP11-203ENST00000377080 PTPRTO14522 1441 aa13.84□□□□□ -0.19
USP11-203ENST00000377080 CEBPAP49715 358 aaPredicted RBP13.84□□□□□ -0.19
USP11-203ENST00000377080 NBPF8Q3BBV2 869 aa13.84□□□□□ -0.19
USP11-203ENST00000377080 CDC42BPAQ5VT25 1732 aa13.84□□□□□ -0.19
USP11-203ENST00000377080 SETD1BQ9UPS6 1966 aaKnown RBP13.83□□□□□ -0.19
USP11-203ENST00000377080 KIF14Q15058 1648 aa13.83□□□□□ -0.2
USP11-203ENST00000377080 ZNF644Q9H582 1327 aaPredicted RBP13.83□□□□□ -0.2
USP11-203ENST00000377080 ROCK2O75116 1388 aaKnown RBP13.83□□□□□ -0.2
USP11-203ENST00000377080 MYO5CQ9NQX4 1742 aa13.82□□□□□ -0.2
USP11-203ENST00000377080 ANKRD50Q9ULJ7 1429 aa13.81□□□□□ -0.2
USP11-203ENST00000377080 HNRNPUQ00839 825 aaKnown RBP eCLIP13.81□□□□□ -0.2
USP11-203ENST00000377080 ZBED9Q6R2W3 1325 aa13.81□□□□□ -0.2
USP11-203ENST00000377080 KTN1Q86UP2 1357 aaKnown RBP13.81□□□□□ -0.2
USP11-203ENST00000377080 KIF7Q2M1P5 1343 aa13.8□□□□□ -0.2
USP11-203ENST00000377080 C11orf95C9JLR9 678 aaPredicted RBP13.79□□□□□ -0.2
USP11-203ENST00000377080 PLCH2O75038 1416 aa13.78□□□□□ -0.2
USP11-203ENST00000377080 C9orf84Q5VXU9 1444 aa13.78□□□□□ -0.2
USP11-203ENST00000377080 ATP10AO60312 1499 aa13.78□□□□□ -0.2
USP11-203ENST00000377080 RALGAPBQ86X10 1494 aa13.78□□□□□ -0.2
USP11-203ENST00000377080 KDM5CP41229 1560 aa13.78□□□□□ -0.2
USP11-203ENST00000377080 SCAPERQ9BY12 1400 aa13.77□□□□□ -0.21
USP11-203ENST00000377080 C3P01024 1663 aa13.76□□□□□ -0.21
USP11-203ENST00000377080 MAST1Q9Y2H9 1570 aa13.75□□□□□ -0.21
USP11-203ENST00000377080 UBAP1LF5GYI3 381 aa13.75□□□□□ -0.21
USP11-203ENST00000377080 FOXD1Q16676 465 aa13.75□□□□□ -0.21
USP11-203ENST00000377080 ANP32EQ9BTT0 268 aa13.75□□□□□ -0.21
USP11-203ENST00000377080 MED1Q15648 1581 aaPredicted RBP13.75□□□□□ -0.21
USP11-203ENST00000377080 DHX29Q7Z478 1369 aaKnown RBP13.74□□□□□ -0.21
USP11-203ENST00000377080 TSPY4P0CV99 314 aa13.74□□□□□ -0.21
USP11-203ENST00000377080 TSPY10P0CW01 314 aa13.74□□□□□ -0.21
USP11-203ENST00000377080 PPP4R2Q9NY27 417 aa13.74□□□□□ -0.21
USP11-203ENST00000377080 USP47Q96K76 1375 aa13.73□□□□□ -0.21
USP11-203ENST00000377080 PKD2Q13563 968 aa13.73□□□□□ -0.21
USP11-203ENST00000377080 MRS2Q9HD23 443 aa13.73□□□□□ -0.21
USP11-203ENST00000377080 RBM19Q9Y4C8 960 aaKnown RBP13.72□□□□□ -0.21
USP11-203ENST00000377080 ARHGAP5Q13017 1502 aa13.72□□□□□ -0.21
USP11-203ENST00000377080 PREX2Q70Z35 1606 aa13.72□□□□□ -0.21
USP11-203ENST00000377080 CDC42BPBQ9Y5S2 1711 aa13.71□□□□□ -0.21
USP11-203ENST00000377080 EFCAB2Q5VUJ9 269 aa13.71□□□□□ -0.21
USP11-203ENST00000377080 SMG6Q86US8 1419 aaKnown RBP13.71□□□□□ -0.22
USP11-203ENST00000377080 NUP155O75694 1391 aa13.71□□□□□ -0.22
USP11-203ENST00000377080 BCANQ96GW7 911 aa13.7□□□□□ -0.22
USP11-203ENST00000377080 LAMC1P11047 1609 aa13.7□□□□□ -0.22
USP11-203ENST00000377080 FANCIQ9NVI1 1328 aa13.69□□□□□ -0.22
USP11-203ENST00000377080 CCDC141Q6ZP82 1450 aa13.69□□□□□ -0.22
USP11-203ENST00000377080 PLEKHH2Q8IVE3 1493 aa13.69□□□□□ -0.22
USP11-203ENST00000377080 CAMSAP1Q5T5Y3 1602 aa13.68□□□□□ -0.22
USP11-203ENST00000377080 ZNF518AQ6AHZ1 1483 aa13.68□□□□□ -0.22
USP11-203ENST00000377080 UNC13BO14795 1591 aa13.68□□□□□ -0.22
USP11-203ENST00000377080 INSRP06213 1382 aa13.68□□□□□ -0.22
USP11-203ENST00000377080 RNF123Q5XPI4 1314 aa13.67□□□□□ -0.22
USP11-203ENST00000377080 ZNF335Q9H4Z2 1342 aaPredicted RBP13.67□□□□□ -0.22
USP11-203ENST00000377080 TRAPPC8Q9Y2L5 1435 aa13.67□□□□□ -0.22
USP11-203ENST00000377080 CCDC184Q52MB2 194 aa13.67□□□□□ -0.22
USP11-203ENST00000377080 WASHC2CQ9Y4E1 1318 aa13.66□□□□□ -0.22
USP11-203ENST00000377080 RALBP1Q15311 655 aa13.66□□□□□ -0.22
USP11-203ENST00000377080 ESF1Q9H501 851 aaKnown RBP13.66□□□□□ -0.22
USP11-203ENST00000377080 ZNF777Q9ULD5 760 aaPredicted RBP13.66□□□□□ -0.22
USP11-203ENST00000377080 KIF15Q9NS87 1388 aa13.66□□□□□ -0.22
USP11-203ENST00000377080 PLXNC1O60486 1568 aa13.66□□□□□ -0.22
USP11-203ENST00000377080 SAMD9LQ8IVG5 1584 aa13.66□□□□□ -0.22
USP11-203ENST00000377080 DIP2CQ9Y2E4 1556 aa13.66□□□□□ -0.22
USP11-203ENST00000377080 E9PCH4 1651 aa13.66□□□□□ -0.22
USP11-203ENST00000377080 ABCA6Q8N139 1617 aa13.65□□□□□ -0.22
USP11-203ENST00000377080 BRD4O60885 1362 aaPredicted RBP13.64□□□□□ -0.23
USP11-203ENST00000377080 GPRASP1Q5JY77 1395 aa13.64□□□□□ -0.23
USP11-203ENST00000377080 AFAP1Q8N556 730 aa13.64□□□□□ -0.23
USP11-203ENST00000377080 PHF23Q9BUL5 403 aaPredicted RBP13.64□□□□□ -0.23
USP11-203ENST00000377080 MYT1LQ9UL68 1186 aa13.64□□□□□ -0.23
USP11-203ENST00000377080 ABCC1P33527 1531 aa13.64□□□□□ -0.23
USP11-203ENST00000377080 FAM135AQ9P2D6 1515 aa13.64□□□□□ -0.23
USP11-203ENST00000377080 REREQ9P2R6 1566 aa13.63□□□□□ -0.23
USP11-203ENST00000377080 HSPA1LP34931 641 aa13.63□□□□□ -0.23
USP11-203ENST00000377080 PNISRQ8TF01 805 aaKnown RBP13.63□□□□□ -0.23
USP11-203ENST00000377080 LRPPRCP42704 1394 aaKnown RBP13.62□□□□□ -0.23
USP11-203ENST00000377080 IQGAP3Q86VI3 1631 aa13.62□□□□□ -0.23
USP11-203ENST00000377080 FAM9BQ8IZU0 186 aa13.62□□□□□ -0.23
USP11-203ENST00000377080 STAC3Q96MF2 364 aa13.62□□□□□ -0.23
USP11-203ENST00000377080 NCKAP5LQ9HCH0 1330 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms